==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATORY PROTEIN 31-OCT-96 1ODD . COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATORY PROTEIN OMPR; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR H.KONDOU,A.NAKAGAWA,I.TANAKA . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6168.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 65.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 21.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 27.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 136 A A 0 0 125 0, 0.0 11,-0.9 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 -60.3 22.1 43.9 36.7 2 137 A V E -A 11 0A 72 9,-0.2 2,-0.4 10,-0.1 9,-0.3 -0.927 360.0-141.3-108.8 123.4 19.4 41.9 35.1 3 138 A I E -A 10 0A 46 7,-4.0 7,-4.6 -2,-0.5 2,-0.4 -0.712 20.3-164.7 -83.8 138.7 18.6 38.6 36.7 4 139 A A E +A 9 0A 66 -2,-0.4 96,-0.5 5,-0.3 2,-0.3 -0.992 18.7 156.5-129.9 130.0 17.9 36.0 34.2 5 140 A F E > -A 8 0A 2 3,-1.6 3,-2.9 -2,-0.4 81,-0.0 -0.968 63.6 -32.5-149.4 134.0 16.2 32.6 34.8 6 141 A G T 3 S- 0 0 48 94,-1.2 71,-0.0 -2,-0.3 94,-0.0 -0.322 128.3 -21.3 58.0-128.9 14.3 30.4 32.4 7 142 A K T 3 S+ 0 0 53 70,-0.2 13,-3.3 -3,-0.1 14,-0.4 0.240 120.6 101.8 -96.5 14.2 12.6 32.6 29.9 8 143 A F E < -AB 5 19A 6 -3,-2.9 -3,-1.6 11,-0.2 2,-0.4 -0.716 47.3-173.1-108.2 150.6 12.7 35.6 32.2 9 144 A K E -AB 4 18A 75 9,-1.8 9,-2.2 -2,-0.3 2,-0.4 -0.977 15.2-168.8-135.5 119.4 14.9 38.6 32.5 10 145 A L E -AB 3 17A 0 -7,-4.6 -7,-4.0 -2,-0.4 2,-0.7 -0.953 13.9-159.0-120.2 131.9 14.5 40.8 35.6 11 146 A N E >> -AB 2 16A 34 5,-2.8 4,-1.9 -2,-0.4 5,-0.6 -0.891 4.0-171.4-107.3 105.2 15.9 44.2 36.2 12 147 A L T 45S+ 0 0 41 -11,-0.9 -1,-0.2 -2,-0.7 -10,-0.1 0.825 84.2 51.8 -65.0 -32.4 15.9 44.9 40.0 13 148 A G T 45S+ 0 0 75 -12,-0.4 -1,-0.2 1,-0.2 -11,-0.1 0.969 123.1 25.0 -69.6 -51.5 16.9 48.6 39.5 14 149 A T T 45S- 0 0 78 2,-0.1 -2,-0.2 1,-0.0 -1,-0.2 0.523 97.4-128.4 -90.0 -14.7 14.1 49.6 37.0 15 150 A R T <5 + 0 0 105 -4,-1.9 2,-0.4 1,-0.3 11,-0.4 0.712 58.4 145.7 71.8 20.9 11.6 47.0 38.0 16 151 A E E < -B 11 0A 96 -5,-0.6 -5,-2.8 9,-0.1 2,-0.4 -0.745 25.5-174.5 -90.9 139.7 11.3 45.9 34.3 17 152 A M E -BC 10 24A 3 7,-0.6 7,-3.3 -2,-0.4 2,-0.4 -0.990 5.9-164.1-137.8 142.6 10.6 42.2 33.7 18 153 A F E -BC 9 23A 45 -9,-2.2 -9,-1.8 -2,-0.4 2,-0.6 -0.984 13.9-157.6-132.8 143.2 10.4 40.3 30.4 19 154 A R E > S-BC 8 22A 112 3,-2.6 3,-1.7 -2,-0.4 -11,-0.2 -0.949 93.6 -21.5-114.9 106.3 9.1 36.9 29.4 20 155 A E T 3 S- 0 0 118 -13,-3.3 -1,-0.2 -2,-0.6 -12,-0.1 0.941 129.2 -54.9 53.9 41.9 10.9 35.8 26.2 21 156 A D T 3 S+ 0 0 114 -14,-0.4 -1,-0.3 1,-0.2 -13,-0.1 0.529 111.5 122.8 71.1 5.8 11.5 39.5 25.7 22 157 A E E < S-C 19 0A 118 -3,-1.7 -3,-2.6 1,-0.0 -1,-0.2 -0.895 70.5-109.7 -99.0 129.0 7.9 40.5 26.0 23 158 A P E -C 18 0A 108 0, 0.0 -5,-0.3 0, 0.0 -7,-0.0 -0.367 36.7-173.8 -62.1 126.5 7.4 43.1 28.9 24 159 A M E -C 17 0A 33 -7,-3.3 -7,-0.6 -2,-0.2 2,-0.2 -0.974 19.6-124.7-122.9 137.6 5.5 41.8 32.0 25 160 A P - 0 0 113 0, 0.0 2,-0.5 0, 0.0 -9,-0.1 -0.576 13.6-158.8 -84.6 144.8 4.4 44.0 34.9 26 161 A L - 0 0 17 -11,-0.4 6,-0.0 -2,-0.2 -2,-0.0 -0.961 15.4-139.5-120.5 112.3 5.3 43.3 38.6 27 162 A T > - 0 0 64 -2,-0.5 4,-3.2 1,-0.1 5,-0.2 -0.227 34.6-100.2 -62.5 164.0 3.0 44.9 41.2 28 163 A S H > S+ 0 0 15 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.896 123.6 49.0 -54.0 -45.7 4.9 46.3 44.2 29 164 A G H > S+ 0 0 0 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.863 114.0 45.1 -64.2 -39.3 4.1 43.3 46.4 30 165 A E H > S+ 0 0 22 2,-0.2 4,-3.3 -3,-0.2 5,-0.3 0.920 115.3 48.0 -70.0 -44.2 5.2 40.8 43.7 31 166 A F H X S+ 0 0 11 -4,-3.2 4,-3.3 2,-0.2 5,-0.3 0.947 110.7 50.7 -61.5 -47.7 8.3 42.8 43.0 32 167 A A H X S+ 0 0 9 -4,-3.0 4,-1.7 -5,-0.2 -1,-0.2 0.913 116.4 41.6 -57.2 -43.7 9.2 43.2 46.7 33 168 A V H X S+ 0 0 4 -4,-1.8 4,-2.0 -5,-0.2 -2,-0.2 0.924 116.2 47.9 -72.8 -40.7 8.9 39.5 47.2 34 169 A L H X S+ 0 0 0 -4,-3.3 4,-3.3 1,-0.2 5,-0.2 0.900 111.1 51.6 -65.9 -41.4 10.6 38.5 43.9 35 170 A K H X S+ 0 0 99 -4,-3.3 4,-2.5 -5,-0.3 -1,-0.2 0.921 108.5 50.5 -62.2 -44.8 13.5 40.8 44.6 36 171 A A H < S+ 0 0 5 -4,-1.7 4,-0.2 -5,-0.3 -2,-0.2 0.947 116.5 42.1 -57.9 -48.5 14.1 39.4 48.1 37 172 A L H >< S+ 0 0 0 -4,-2.0 3,-1.4 1,-0.2 60,-0.4 0.945 116.2 46.9 -61.9 -54.3 14.1 35.9 46.7 38 173 A V H 3< S+ 0 0 4 -4,-3.3 -1,-0.2 1,-0.3 -2,-0.2 0.806 109.0 54.3 -61.3 -33.4 16.2 36.6 43.6 39 174 A S T 3< S+ 0 0 57 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.448 109.4 50.9 -81.8 0.0 18.8 38.7 45.6 40 175 A H S X S- 0 0 38 -3,-1.4 3,-2.1 -4,-0.2 57,-0.5 -0.438 83.0-166.5-133.2 60.4 19.3 35.7 47.9 41 176 A P B 3 S-d 97 0B 45 0, 0.0 57,-0.2 0, 0.0 -3,-0.1 -0.235 74.0 -2.8 -54.7 124.9 19.9 32.8 45.5 42 177 A R T 3 S+ 0 0 161 55,-3.1 56,-0.1 1,-0.2 54,-0.1 0.682 98.8 122.7 65.2 17.9 19.7 29.5 47.3 43 178 A E < - 0 0 79 -3,-2.1 54,-0.4 -6,-0.3 -1,-0.2 -0.960 62.5-134.7-107.6 109.3 19.1 31.1 50.7 44 179 A P - 0 0 48 0, 0.0 2,-0.5 0, 0.0 52,-0.3 -0.453 22.6-156.0 -64.6 132.3 15.8 29.7 52.1 45 180 A L B -E 95 0B 0 50,-3.9 50,-2.5 -2,-0.1 45,-0.1 -0.959 7.0-136.7-117.7 127.5 13.9 32.6 53.5 46 181 A S > - 0 0 41 -2,-0.5 4,-2.3 48,-0.2 48,-0.2 -0.226 32.9-105.8 -67.8 171.7 11.2 32.3 56.1 47 182 A R H > S+ 0 0 126 46,-0.4 4,-3.0 2,-0.2 5,-0.2 0.854 123.4 52.7 -68.1 -35.1 8.0 34.2 55.7 48 183 A D H > S+ 0 0 127 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.951 110.5 45.9 -63.7 -48.9 9.2 36.6 58.4 49 184 A K H > S+ 0 0 94 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.883 113.6 50.1 -61.8 -39.0 12.5 37.2 56.7 50 185 A L H X S+ 0 0 1 -4,-2.3 4,-3.1 2,-0.2 5,-0.2 0.970 109.6 50.4 -62.8 -53.5 10.7 37.7 53.4 51 186 A M H X S+ 0 0 68 -4,-3.0 4,-0.9 1,-0.2 -2,-0.2 0.865 113.6 46.3 -52.4 -40.8 8.3 40.2 55.0 52 187 A N H < S+ 0 0 90 -4,-2.3 3,-0.3 1,-0.2 -1,-0.2 0.883 115.0 45.5 -69.3 -42.9 11.3 42.1 56.4 53 188 A L H < S+ 0 0 69 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.817 107.3 59.9 -69.8 -32.1 13.3 42.0 53.2 54 189 A A H < S+ 0 0 6 -4,-3.1 7,-0.2 -5,-0.2 -1,-0.2 0.796 79.5 110.5 -67.0 -27.0 10.2 43.0 51.1 55 190 A R < + 0 0 158 -4,-0.9 2,-0.2 -3,-0.3 4,-0.1 -0.240 41.3 157.1 -54.6 128.6 9.7 46.4 53.1 56 191 A G - 0 0 52 2,-0.7 4,-0.1 -2,-0.0 5,-0.1 -0.603 60.3 -79.6-136.3-167.9 10.5 49.4 51.0 57 192 A R S S+ 0 0 244 -2,-0.2 2,-0.3 2,-0.1 -2,-0.1 0.351 111.3 56.7 -81.7 8.6 9.7 53.2 50.9 58 193 A E S S- 0 0 84 -30,-0.1 2,-0.8 0, 0.0 -2,-0.7 -0.820 104.1 -78.2-131.9 174.8 6.4 52.2 49.3 59 194 A Y S S+ 0 0 141 -2,-0.3 -30,-0.1 1,-0.2 -31,-0.1 -0.622 85.3 105.1 -75.8 107.2 3.3 50.1 50.0 60 195 A S > + 0 0 6 -2,-0.8 3,-1.9 -4,-0.1 4,-0.4 0.431 64.2 54.2-149.1 -57.8 4.5 46.6 49.1 61 196 A A T 3 S+ 0 0 10 -3,-0.4 3,-0.2 1,-0.3 -6,-0.1 0.787 113.7 49.6 -60.7 -26.5 5.2 44.2 52.0 62 197 A M T 3 S+ 0 0 160 1,-0.2 -1,-0.3 -8,-0.1 3,-0.1 0.255 84.7 94.4 -95.9 8.9 1.7 44.9 53.2 63 198 A E S < S- 0 0 43 -3,-1.9 2,-0.3 1,-0.2 -1,-0.2 0.945 98.9 -20.2 -66.3 -52.0 0.0 44.3 49.9 64 199 A R S S- 0 0 127 -4,-0.4 2,-0.2 -3,-0.2 -1,-0.2 -0.935 81.5 -73.4-150.4 171.2 -0.9 40.6 50.4 65 200 A S >> - 0 0 50 -2,-0.3 4,-1.9 1,-0.1 3,-1.5 -0.505 47.5-116.3 -70.6 139.6 0.1 37.6 52.6 66 201 A I H 3> S+ 0 0 11 1,-0.3 4,-2.5 2,-0.2 5,-0.2 0.797 112.5 54.0 -45.0 -46.6 3.4 36.0 51.6 67 202 A D H 3> S+ 0 0 62 1,-0.2 4,-2.4 2,-0.2 -1,-0.3 0.839 109.5 48.1 -59.5 -37.5 2.0 32.7 50.6 68 203 A V H <> S+ 0 0 39 -3,-1.5 4,-3.2 2,-0.2 -1,-0.2 0.889 111.2 49.3 -71.0 -41.0 -0.4 34.4 48.2 69 204 A Q H X S+ 0 0 2 -4,-1.9 4,-2.9 2,-0.2 -2,-0.2 0.898 113.3 48.5 -63.1 -41.2 2.3 36.5 46.7 70 205 A I H X S+ 0 0 1 -4,-2.5 4,-2.5 -5,-0.3 -2,-0.2 0.932 111.6 49.1 -64.0 -45.1 4.4 33.4 46.3 71 206 A S H X S+ 0 0 78 -4,-2.4 4,-1.6 1,-0.2 -2,-0.2 0.936 113.2 47.1 -59.9 -47.8 1.4 31.7 44.7 72 207 A R H X S+ 0 0 123 -4,-3.2 4,-1.3 1,-0.2 -2,-0.2 0.916 112.1 49.6 -60.0 -47.1 0.9 34.6 42.3 73 208 A L H X S+ 0 0 0 -4,-2.9 4,-2.3 1,-0.2 5,-0.2 0.865 108.1 53.5 -61.6 -38.2 4.6 34.7 41.4 74 209 A R H X S+ 0 0 33 -4,-2.5 4,-2.1 1,-0.2 -1,-0.2 0.825 105.0 55.1 -65.7 -33.3 4.7 31.0 40.7 75 210 A R H < S+ 0 0 217 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.853 112.8 44.1 -66.1 -33.9 1.8 31.4 38.3 76 211 A M H < S+ 0 0 45 -4,-1.3 -2,-0.2 -5,-0.1 -1,-0.2 0.864 128.2 22.3 -79.8 -38.3 3.9 34.0 36.5 77 212 A V H < S+ 0 0 4 -4,-2.3 2,-0.4 -71,-0.0 -3,-0.2 0.495 103.5 83.4-112.7 -2.3 7.3 32.2 36.4 78 213 A E < - 0 0 16 -4,-2.1 4,-0.0 -5,-0.2 0, 0.0 -0.824 57.9-151.7-107.6 143.4 6.6 28.5 36.7 79 214 A E S S+ 0 0 153 -2,-0.4 -1,-0.2 1,-0.3 -5,-0.0 0.870 103.2 17.0 -70.2 -38.1 5.7 26.1 34.0 80 215 A D > - 0 0 72 3,-0.3 3,-1.1 1,-0.1 -1,-0.3 -0.925 67.8-165.9-137.9 104.9 4.0 24.1 36.8 81 216 A P T 3 S+ 0 0 55 0, 0.0 -1,-0.1 0, 0.0 -6,-0.1 0.777 93.0 60.2 -59.0 -30.4 3.3 26.0 40.1 82 217 A A T 3 S+ 0 0 73 1,-0.3 -8,-0.0 -8,-0.1 -2,-0.0 0.748 118.2 30.1 -70.5 -24.6 2.6 22.6 41.8 83 218 A H S < S- 0 0 143 -3,-1.1 -3,-0.3 5,-0.0 -1,-0.3 -0.592 90.8-170.7-134.4 70.0 6.2 21.6 40.9 84 219 A P - 0 0 27 0, 0.0 5,-0.1 0, 0.0 -6,-0.1 -0.291 16.7-174.5 -64.2 144.5 8.1 25.0 40.9 85 220 A R S S+ 0 0 87 -8,-0.1 3,-0.2 3,-0.1 13,-0.1 0.753 83.0 29.7-107.2 -40.4 11.6 25.1 39.6 86 221 A Y S S+ 0 0 38 1,-0.3 12,-2.5 -9,-0.1 2,-0.9 0.867 121.9 43.3 -92.3 -42.5 12.6 28.7 40.4 87 222 A I E S+F 97 0B 0 10,-0.2 -1,-0.3 -13,-0.1 10,-0.2 -0.857 84.2 176.8-109.1 93.7 10.6 29.6 43.5 88 223 A Q E -F 96 0B 66 8,-2.3 8,-2.7 -2,-0.9 2,-0.4 -0.564 27.5-123.9 -99.3 161.4 11.0 26.5 45.6 89 224 A T E -F 95 0B 51 6,-0.2 2,-0.6 -2,-0.2 6,-0.2 -0.846 11.6-157.1-104.7 134.8 9.8 25.5 49.1 90 225 A V E >> -F 94 0B 43 4,-2.5 3,-2.0 -2,-0.4 4,-1.1 -0.966 32.0-117.7-110.7 112.4 12.2 24.3 51.8 91 226 A W T 34 S+ 0 0 230 -2,-0.6 3,-0.1 1,-0.3 4,-0.0 -0.198 92.3 6.1 -54.5 137.0 10.3 22.2 54.3 92 227 A G T 34 S+ 0 0 94 1,-0.2 -1,-0.3 2,-0.0 -46,-0.0 0.379 130.7 58.1 72.9 -0.7 10.2 23.6 57.8 93 228 A L T <4 S- 0 0 93 -3,-2.0 -46,-0.4 1,-0.3 2,-0.2 0.676 96.6-106.8-118.9 -77.8 12.0 26.8 56.7 94 229 A G E < - F 0 90B 10 -4,-1.1 -4,-2.5 -48,-0.2 2,-0.3 -0.716 51.6 -34.1 178.8-125.7 10.3 28.9 54.0 95 230 A Y E -EF 45 89B 23 -50,-2.5 -50,-3.9 -6,-0.2 2,-0.3 -0.905 43.8-165.5-128.2 157.8 11.0 29.6 50.3 96 231 A V E - F 0 88B 11 -8,-2.7 -8,-2.3 -2,-0.3 2,-0.6 -0.991 21.8-127.2-146.3 143.7 14.1 29.9 48.1 97 232 A F E -dF 41 87B 6 -57,-0.5 -55,-3.1 -60,-0.4 -10,-0.2 -0.853 23.2-162.8 -90.3 123.3 15.0 31.2 44.7 98 233 A V - 0 0 34 -12,-2.5 -60,-0.0 -2,-0.6 -2,-0.0 -0.931 17.4-140.1-108.2 110.8 16.9 28.5 42.7 99 234 A P 0 0 28 0, 0.0 -94,-0.1 0, 0.0 -61,-0.0 -0.052 360.0 360.0 -67.9 163.6 18.8 30.1 39.8 100 235 A D 0 0 139 -96,-0.5 -94,-1.2 -94,-0.0 -14,-0.1 -0.902 360.0 360.0 122.6 360.0 19.3 28.8 36.1