==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 21-DEC-06 2OD5 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED MARINE ORGANISM; . AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6646.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 60.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 16.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 37.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A E 0 0 221 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -35.5 -3.4 12.6 10.3 2 7 A T > - 0 0 72 1,-0.1 4,-2.1 4,-0.0 5,-0.2 -0.254 360.0-115.1 -69.8 159.7 -0.9 15.5 10.4 3 8 A E H > S+ 0 0 76 1,-0.2 4,-2.5 2,-0.2 5,-0.1 0.836 119.3 52.8 -61.4 -35.3 2.6 15.3 8.9 4 9 A S H > S+ 0 0 73 2,-0.2 4,-3.0 1,-0.2 -1,-0.2 0.906 107.1 51.3 -66.4 -44.5 4.0 15.6 12.5 5 10 A X H > S+ 0 0 118 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.898 112.4 46.3 -58.2 -44.9 1.8 12.8 13.7 6 11 A K H X S+ 0 0 69 -4,-2.1 4,-2.7 2,-0.2 -2,-0.2 0.949 112.4 50.4 -62.2 -48.8 3.1 10.6 10.9 7 12 A T H X S+ 0 0 49 -4,-2.5 4,-2.7 1,-0.2 -2,-0.2 0.905 109.6 50.8 -58.9 -42.9 6.6 11.6 11.6 8 13 A V H X S+ 0 0 84 -4,-3.0 4,-1.8 2,-0.2 -1,-0.2 0.891 111.1 48.7 -58.7 -42.9 6.2 10.8 15.3 9 14 A R H X S+ 0 0 119 -4,-1.9 4,-1.9 2,-0.2 -2,-0.2 0.906 111.1 50.6 -62.1 -44.1 4.9 7.4 14.4 10 15 A I H X S+ 0 0 5 -4,-2.7 4,-2.6 1,-0.2 -2,-0.2 0.922 107.7 53.2 -61.8 -46.0 7.8 6.8 12.0 11 16 A R H X S+ 0 0 77 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.880 107.9 50.4 -57.0 -43.4 10.3 7.8 14.7 12 17 A E H X S+ 0 0 74 -4,-1.8 4,-1.9 2,-0.2 -1,-0.2 0.892 111.5 48.0 -65.5 -39.4 8.9 5.3 17.1 13 18 A K H X S+ 0 0 56 -4,-1.9 4,-2.4 2,-0.2 -2,-0.2 0.921 111.3 50.2 -63.8 -44.9 9.0 2.5 14.6 14 19 A I H X S+ 0 0 0 -4,-2.6 4,-2.4 2,-0.2 -2,-0.2 0.932 109.3 51.3 -60.1 -46.6 12.6 3.3 13.6 15 20 A K H < S+ 0 0 37 -4,-2.3 4,-0.5 1,-0.2 -1,-0.2 0.919 111.8 46.8 -61.2 -42.0 13.8 3.3 17.3 16 21 A K H >< S+ 0 0 127 -4,-1.9 3,-1.0 1,-0.2 4,-0.4 0.919 112.0 50.8 -63.1 -44.1 12.2 -0.1 17.9 17 22 A F H 3< S+ 0 0 34 -4,-2.4 3,-0.5 1,-0.2 4,-0.3 0.880 110.8 48.5 -61.2 -40.2 13.7 -1.5 14.7 18 23 A L T 3< S+ 0 0 0 -4,-2.4 60,-0.5 1,-0.2 -1,-0.2 0.459 84.5 98.0 -82.7 -0.8 17.2 -0.2 15.6 19 24 A G S < S+ 0 0 39 -3,-1.0 -1,-0.2 -4,-0.5 -2,-0.1 0.903 84.0 43.5 -51.6 -49.1 17.0 -1.7 19.2 20 25 A D S S- 0 0 144 -3,-0.5 -1,-0.2 -4,-0.4 -2,-0.1 0.882 128.9 -34.5 -69.8 -41.7 19.0 -4.8 18.5 21 26 A R S S- 0 0 126 -4,-0.3 -1,-0.2 55,-0.1 55,-0.1 -0.975 76.9 -63.8-171.5 165.1 21.8 -3.4 16.4 22 27 A P - 0 0 34 0, 0.0 2,-0.3 0, 0.0 55,-0.2 -0.250 49.1-169.1 -61.4 150.4 22.6 -0.7 13.8 23 28 A R E -A 76 0A 46 53,-2.2 53,-2.8 3,-0.0 2,-0.1 -0.955 20.2-111.0-138.7 157.0 20.9 -0.9 10.4 24 29 A N E > -A 75 0A 43 -2,-0.3 4,-2.3 51,-0.2 51,-0.2 -0.399 34.4-104.4 -89.1 164.7 21.3 0.8 7.0 25 30 A T H > S+ 0 0 25 49,-1.9 4,-2.9 1,-0.2 5,-0.2 0.860 119.1 53.5 -58.4 -37.2 18.9 3.3 5.5 26 31 A A H > S+ 0 0 65 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.888 109.5 47.0 -63.6 -46.7 17.6 0.7 3.0 27 32 A E H > S+ 0 0 57 -3,-0.2 4,-2.3 2,-0.2 -2,-0.2 0.894 113.3 49.8 -60.9 -41.1 16.8 -1.8 5.6 28 33 A I H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 5,-0.3 0.953 111.4 48.4 -64.6 -45.9 15.1 0.9 7.7 29 34 A L H X S+ 0 0 34 -4,-2.9 4,-2.7 1,-0.2 5,-0.2 0.913 111.0 50.0 -60.6 -45.8 13.0 2.0 4.7 30 35 A E H X S+ 0 0 153 -4,-2.4 4,-1.2 1,-0.2 -1,-0.2 0.928 113.3 46.8 -62.1 -41.0 12.0 -1.5 3.9 31 36 A H H < S+ 0 0 60 -4,-2.3 4,-0.4 2,-0.2 3,-0.4 0.951 115.4 44.6 -62.9 -53.1 10.9 -2.2 7.5 32 37 A I H >< S+ 0 0 0 -4,-2.9 3,-1.6 1,-0.2 -2,-0.2 0.938 114.3 48.1 -55.4 -52.8 9.0 1.1 7.8 33 38 A N H 3< S+ 0 0 62 -4,-2.7 3,-0.4 -5,-0.3 -1,-0.2 0.696 104.6 61.8 -68.9 -18.0 7.3 0.8 4.5 34 39 A S T 3< S+ 0 0 85 -4,-1.2 -1,-0.3 -3,-0.4 -2,-0.2 0.577 111.1 38.1 -78.4 -10.3 6.3 -2.8 5.2 35 40 A T S < S+ 0 0 61 -3,-1.6 2,-0.3 -4,-0.4 -1,-0.2 0.112 105.4 67.7-131.8 18.8 4.2 -1.8 8.2 36 41 A X S S- 0 0 20 -3,-0.4 4,-0.1 -4,-0.2 -26,-0.0 -0.951 76.4-124.9-137.1 152.1 2.5 1.5 7.2 37 42 A R S S+ 0 0 198 -2,-0.3 -1,-0.1 1,-0.1 -4,-0.0 0.929 105.6 5.2 -64.0 -48.0 -0.2 2.1 4.6 38 43 A H S S+ 0 0 149 1,-0.1 -1,-0.1 0, 0.0 -5,-0.1 0.765 88.7 178.5-112.0 -36.7 1.7 4.8 2.7 39 44 A G - 0 0 5 -7,-0.1 2,-0.2 -4,-0.0 -1,-0.1 -0.254 27.3 -80.3 70.8-150.2 5.1 4.9 4.3 40 45 A T - 0 0 19 -11,-0.2 2,-0.3 -4,-0.1 -4,-0.0 -0.695 29.9-102.8-143.9-175.2 7.9 7.2 3.1 41 46 A T > - 0 0 63 -2,-0.2 4,-2.7 1,-0.1 5,-0.2 -0.773 34.0-111.0-114.9 164.1 10.7 7.7 0.6 42 47 A S H > S+ 0 0 80 -2,-0.3 4,-2.2 1,-0.2 5,-0.1 0.899 119.2 51.6 -65.6 -33.6 14.4 7.2 1.0 43 48 A Q H > S+ 0 0 154 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.957 112.7 43.3 -66.1 -49.3 14.9 11.0 0.7 44 49 A Q H > S+ 0 0 107 1,-0.2 4,-2.3 2,-0.2 -2,-0.2 0.898 112.1 54.4 -62.5 -40.3 12.3 11.8 3.4 45 50 A L H X S+ 0 0 0 -4,-2.7 4,-3.0 1,-0.2 5,-0.3 0.915 103.9 55.2 -63.3 -41.1 13.6 9.0 5.7 46 51 A G H X S+ 0 0 19 -4,-2.2 4,-2.1 -5,-0.2 -1,-0.2 0.908 109.3 47.9 -57.4 -41.7 17.1 10.4 5.5 47 52 A N H X S+ 0 0 111 -4,-1.6 4,-2.6 2,-0.2 -2,-0.2 0.921 111.7 49.3 -63.3 -45.5 15.8 13.8 6.7 48 53 A V H X S+ 0 0 18 -4,-2.3 4,-1.9 1,-0.2 -2,-0.2 0.910 112.1 48.3 -60.1 -45.6 13.8 12.1 9.5 49 54 A L H < S+ 0 0 0 -4,-3.0 6,-0.3 1,-0.2 -1,-0.2 0.903 114.1 46.1 -64.2 -42.0 16.9 10.1 10.7 50 55 A S H < S+ 0 0 68 -4,-2.1 -2,-0.2 -5,-0.3 -1,-0.2 0.895 114.5 47.6 -66.4 -41.0 19.1 13.2 10.6 51 56 A K H < S+ 0 0 151 -4,-2.6 2,-0.8 -5,-0.2 -2,-0.2 0.765 93.5 83.8 -73.9 -28.7 16.6 15.4 12.4 52 57 A D >< - 0 0 6 -4,-1.9 3,-1.6 -5,-0.2 -1,-0.0 -0.686 64.5-161.3 -81.0 113.0 15.8 12.8 15.2 53 58 A K T 3 S+ 0 0 135 -2,-0.8 -1,-0.2 1,-0.3 -4,-0.1 0.585 85.6 65.0 -72.2 -11.4 18.6 13.3 17.8 54 59 A D T 3 S+ 0 0 101 1,-0.1 25,-2.6 24,-0.1 2,-0.5 0.547 95.7 65.2 -82.3 -9.3 17.9 9.8 19.3 55 60 A I E < S-B 78 0A 5 -3,-1.6 2,-0.3 -6,-0.3 23,-0.2 -0.966 74.4-167.7-123.5 112.8 19.0 8.2 16.1 56 61 A V E -B 77 0A 15 21,-2.6 21,-2.2 -2,-0.5 2,-0.5 -0.750 24.1-118.3-109.6 144.5 22.7 8.7 15.3 57 62 A K E +B 76 0A 95 -2,-0.3 19,-0.3 19,-0.2 3,-0.1 -0.700 32.9 171.7 -83.0 121.8 24.7 8.0 12.1 58 63 A V E + 0 0 61 17,-2.5 2,-0.3 -2,-0.5 18,-0.2 0.492 58.7 4.8-110.5 -7.1 27.4 5.5 12.8 59 64 A G E -B 75 0A 18 16,-1.3 16,-2.9 2,-0.0 2,-0.3 -0.980 52.8-162.8-172.9 166.1 28.8 4.8 9.4 60 65 A Y E -B 74 0A 117 -2,-0.3 2,-0.4 14,-0.3 14,-0.2 -0.978 6.1-168.4-154.5 141.8 28.7 5.6 5.7 61 66 A I E -B 73 0A 92 12,-2.2 12,-2.7 -2,-0.3 2,-0.5 -0.993 10.8-169.9-129.8 129.3 29.8 4.1 2.3 62 67 A K E -B 72 0A 126 -2,-0.4 2,-0.4 10,-0.2 10,-0.2 -0.978 6.3-167.8-113.8 131.6 29.7 6.3 -0.7 63 68 A R E +B 71 0A 116 8,-3.1 8,-2.3 -2,-0.5 2,-0.3 -0.964 11.0 169.4-118.0 139.6 30.2 4.6 -4.1 64 69 A S E +B 70 0A 77 -2,-0.4 2,-0.3 6,-0.2 6,-0.2 -0.993 7.7 153.5-143.4 143.5 30.9 6.3 -7.4 65 70 A G E > -B 69 0A 19 4,-0.7 4,-2.3 -2,-0.3 -2,-0.0 -0.975 54.6-114.1-166.1 152.9 32.0 4.9 -10.7 66 71 A I T 4 S+ 0 0 194 -2,-0.3 -1,-0.1 1,-0.2 4,-0.1 0.791 127.2 24.7 -64.1 -21.9 31.8 5.5 -14.4 67 72 A L T 4 S+ 0 0 168 2,-0.1 -1,-0.2 -3,-0.1 3,-0.1 0.804 123.1 53.2-101.6 -47.3 29.6 2.3 -14.5 68 73 A S T 4 S- 0 0 50 1,-0.1 -2,-0.2 -4,-0.1 2,-0.1 0.743 87.0-155.4 -50.8 -30.8 28.2 2.4 -10.9 69 74 A G E < - B 0 65A 39 -4,-2.3 -4,-0.7 2,-0.0 2,-0.4 -0.353 41.9 -61.0 57.0-158.9 27.0 5.9 -11.1 70 75 A G E + B 0 64A 56 -6,-0.2 2,-0.3 -3,-0.1 -6,-0.2 -0.885 60.9 150.4-121.5 144.0 26.9 7.2 -7.5 71 76 A Y E - B 0 63A 123 -8,-2.3 -8,-3.1 -2,-0.4 2,-0.3 -0.970 25.9-141.0-160.1 162.1 25.0 6.2 -4.3 72 77 A D E - B 0 62A 87 -2,-0.3 2,-0.4 -10,-0.2 -10,-0.2 -0.924 4.0-162.1-122.0 152.2 25.5 6.3 -0.6 73 78 A I E - B 0 61A 47 -12,-2.7 -12,-2.2 -2,-0.3 2,-0.3 -0.993 14.5-165.1-130.8 126.6 24.5 3.8 2.1 74 79 A C E - B 0 60A 13 -2,-0.4 -49,-1.9 -14,-0.2 2,-0.4 -0.866 9.6-144.2-115.3 149.6 24.4 5.1 5.7 75 80 A E E -AB 24 59A 74 -16,-2.9 -17,-2.5 -2,-0.3 -16,-1.3 -0.931 19.0-168.7-113.6 136.0 24.3 3.1 8.9 76 81 A W E +AB 23 57A 8 -53,-2.8 -53,-2.2 -2,-0.4 2,-0.3 -0.932 10.2 174.9-130.2 149.8 22.2 4.2 11.9 77 82 A A E - B 0 56A 0 -21,-2.2 -21,-2.6 -2,-0.3 2,-0.2 -0.940 38.7 -96.4-142.0 160.6 21.9 3.3 15.6 78 83 A T E > - B 0 55A 21 -60,-0.5 4,-2.1 -2,-0.3 -23,-0.3 -0.553 34.1-122.0 -73.7 152.1 20.0 4.6 18.6 79 84 A R H > S+ 0 0 104 -25,-2.6 4,-2.5 1,-0.2 5,-0.1 0.871 114.4 52.8 -59.4 -40.0 22.0 6.9 20.8 80 85 A N H > S+ 0 0 128 -26,-0.3 4,-2.1 2,-0.2 -1,-0.2 0.887 105.2 53.9 -65.5 -37.0 21.4 4.5 23.7 81 86 A W H > S+ 0 0 49 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.955 111.5 45.9 -60.2 -47.4 22.7 1.6 21.7 82 87 A V H X S+ 0 0 5 -4,-2.1 4,-3.1 1,-0.2 7,-0.3 0.915 110.0 53.6 -62.0 -42.1 25.9 3.5 21.0 83 88 A A H < S+ 0 0 58 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.883 114.9 41.8 -59.1 -37.7 26.2 4.6 24.6 84 89 A E H < S+ 0 0 96 -4,-2.1 -2,-0.2 -5,-0.1 -1,-0.2 0.872 125.5 32.1 -78.9 -37.5 26.0 0.9 25.7 85 90 A H H < S+ 0 0 112 -4,-2.7 -2,-0.2 1,-0.2 -3,-0.2 0.676 128.3 34.5 -98.5 -22.2 28.2 -0.6 23.0 86 91 A C >< + 0 0 53 -4,-3.1 3,-2.3 -5,-0.3 -1,-0.2 -0.614 65.7 167.4-130.1 72.6 30.7 2.2 22.4 87 92 A P T 3 S+ 0 0 95 0, 0.0 -4,-0.1 0, 0.0 -1,-0.1 0.366 74.9 58.0 -80.0 8.5 31.1 3.8 25.8 88 93 A E T 3 S+ 0 0 178 2,-0.0 2,-0.2 -3,-0.0 -5,-0.1 0.366 87.5 106.3-103.2 -1.1 34.2 5.8 24.8 89 94 A W < + 0 0 109 -3,-2.3 2,-0.3 -7,-0.3 -3,-0.1 -0.508 42.9 170.2 -86.4 147.8 32.2 7.5 22.0 90 95 A T 0 0 110 -2,-0.2 -2,-0.0 1,-0.0 0, 0.0 -0.989 360.0 360.0-147.1 149.6 31.0 11.1 22.1 91 96 A E 0 0 199 -2,-0.3 -1,-0.0 0, 0.0 0, 0.0 -0.052 360.0 360.0-140.3 360.0 29.4 13.7 19.8