==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 22-DEC-06 2ODC . COMPND 2 MOLECULE: EMERIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.M.CLORE,M.CAI . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4065.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 70.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 53.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 I H 0 0 198 0, 0.0 2,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -31.8 22.1 -24.8 -12.0 2 2 I D >> - 0 0 96 1,-0.1 4,-1.5 2,-0.1 3,-1.1 -0.453 360.0-108.8 -74.3 146.8 21.3 -21.1 -11.8 3 3 I N G >4 S+ 0 0 137 1,-0.3 3,-0.9 2,-0.2 4,-0.3 0.930 126.3 38.5 -42.1 -52.1 23.8 -18.8 -13.5 4 4 I Y G >4 S+ 0 0 34 1,-0.2 3,-1.0 2,-0.2 -1,-0.3 0.734 106.5 68.6 -74.3 -17.7 25.0 -17.7 -10.1 5 5 I A G <4 S+ 0 0 12 -3,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.767 90.5 61.5 -72.9 -20.9 24.6 -21.2 -8.8 6 6 I D G << S+ 0 0 115 -4,-1.5 -1,-0.2 -3,-0.9 2,-0.2 0.634 84.4 99.5 -79.8 -8.0 27.6 -22.3 -11.0 7 7 I L S < S- 0 0 40 -3,-1.0 2,-0.1 -5,-0.3 -5,-0.1 -0.533 77.2-124.7 -76.8 141.8 29.8 -19.9 -9.1 8 8 I S > - 0 0 61 -2,-0.2 4,-3.2 1,-0.1 5,-0.3 -0.457 25.4-106.0 -83.5 158.0 31.9 -21.6 -6.3 9 9 I D H > S+ 0 0 63 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.919 122.4 51.0 -50.5 -44.8 31.7 -20.3 -2.7 10 10 I T H > S+ 0 0 112 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.935 114.0 43.7 -61.6 -43.2 35.1 -18.6 -3.1 11 11 I E H > S+ 0 0 115 2,-0.2 4,-1.6 1,-0.2 -2,-0.2 0.882 112.0 53.2 -71.0 -36.1 34.0 -16.9 -6.3 12 12 I L H X S+ 0 0 1 -4,-3.2 4,-2.0 1,-0.2 5,-0.2 0.949 108.2 50.8 -64.5 -43.5 30.7 -15.9 -4.8 13 13 I T H X S+ 0 0 46 -4,-2.5 4,-1.9 -5,-0.3 -2,-0.2 0.930 108.5 50.5 -61.3 -44.9 32.3 -14.3 -1.7 14 14 I T H X S+ 0 0 88 -4,-1.8 4,-2.0 -5,-0.2 -1,-0.2 0.863 108.6 54.9 -64.0 -30.6 34.7 -12.2 -3.9 15 15 I L H X S+ 0 0 40 -4,-1.6 4,-1.6 2,-0.2 -2,-0.2 0.946 106.1 48.6 -68.6 -45.3 31.7 -11.0 -5.9 16 16 I L H <>S+ 0 0 0 -4,-2.0 5,-2.7 1,-0.2 4,-0.4 0.908 109.9 55.2 -60.9 -38.0 29.7 -9.7 -2.9 17 17 I R H ><5S+ 0 0 181 -4,-1.9 3,-2.1 -5,-0.2 -1,-0.2 0.953 100.8 56.8 -61.5 -47.5 32.9 -8.0 -1.8 18 18 I R H 3<5S+ 0 0 173 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.897 113.2 41.0 -53.0 -39.7 33.2 -6.1 -5.1 19 19 I Y T 3<5S- 0 0 17 -4,-1.6 -1,-0.3 2,-0.1 -2,-0.2 0.465 112.3-123.2 -89.3 3.0 29.7 -4.7 -4.6 20 20 I N T < 5 + 0 0 136 -3,-2.1 -3,-0.2 -4,-0.4 -2,-0.1 0.949 53.2 161.9 58.8 46.4 30.5 -4.1 -0.9 21 21 I I < - 0 0 30 -5,-2.7 -1,-0.2 -6,-0.1 -2,-0.1 -0.881 39.5-124.3-103.5 115.4 27.5 -6.2 0.1 22 22 I P + 0 0 115 0, 0.0 2,-0.3 0, 0.0 -5,-0.0 -0.226 42.9 162.5 -54.5 138.8 27.6 -7.5 3.8 23 23 I H - 0 0 69 3,-0.0 3,-0.1 -10,-0.0 -10,-0.0 -0.995 27.6-150.4-157.0 162.3 27.4 -11.3 4.1 24 24 I G - 0 0 35 -2,-0.3 2,-0.1 1,-0.3 0, 0.0 -0.081 61.5 -23.1-111.6-147.8 28.0 -14.2 6.5 25 25 I P - 0 0 112 0, 0.0 2,-0.6 0, 0.0 -1,-0.3 -0.395 61.1-133.6 -65.9 137.5 28.9 -17.9 5.8 26 26 I V + 0 0 23 -2,-0.1 2,-0.3 -3,-0.1 5,-0.1 -0.815 40.0 153.1 -96.3 119.3 27.9 -19.2 2.4 27 27 I V >> - 0 0 71 -2,-0.6 4,-3.6 1,-0.1 3,-2.2 -0.996 59.5-107.2-143.3 148.2 26.1 -22.6 2.5 28 28 I G H 3> S+ 0 0 66 -2,-0.3 4,-0.7 1,-0.3 -1,-0.1 0.855 121.5 61.1 -43.1 -35.3 23.6 -24.4 0.3 29 29 I S H 34 S+ 0 0 112 1,-0.2 -1,-0.3 2,-0.1 4,-0.2 0.883 126.6 13.2 -63.1 -35.7 21.1 -23.6 3.1 30 30 I T H <> S+ 0 0 54 -3,-2.2 4,-1.7 2,-0.1 -2,-0.2 0.352 103.6 95.6-120.7 2.4 21.7 -19.8 2.6 31 31 I R H X S+ 0 0 70 -4,-3.6 4,-2.4 1,-0.2 5,-0.2 0.923 83.1 55.0 -60.0 -43.1 23.5 -19.9 -0.7 32 32 I R H X S+ 0 0 190 -4,-0.7 4,-2.3 -5,-0.3 5,-0.2 0.942 103.7 53.6 -58.4 -45.2 20.3 -19.2 -2.6 33 33 I L H > S+ 0 0 94 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.920 110.2 49.1 -57.9 -38.4 19.6 -16.1 -0.6 34 34 I Y H X S+ 0 0 21 -4,-1.7 4,-2.0 1,-0.2 5,-0.2 0.904 106.8 54.7 -68.4 -38.2 23.0 -14.9 -1.5 35 35 I E H X S+ 0 0 20 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.911 108.8 49.1 -63.1 -38.1 22.5 -15.7 -5.2 36 36 I K H X S+ 0 0 146 -4,-2.3 4,-2.4 -5,-0.2 -1,-0.2 0.902 107.0 55.6 -68.2 -39.0 19.3 -13.5 -5.2 37 37 I K H X S+ 0 0 87 -4,-1.8 4,-1.8 -5,-0.2 -2,-0.2 0.932 108.9 46.2 -61.5 -43.5 21.1 -10.6 -3.5 38 38 I I H X S+ 0 0 0 -4,-2.0 4,-2.9 1,-0.2 5,-0.3 0.904 110.2 55.3 -66.9 -36.6 23.7 -10.4 -6.2 39 39 I F H X S+ 0 0 103 -4,-1.7 4,-2.4 -5,-0.2 -2,-0.2 0.938 106.5 50.1 -61.8 -45.3 21.0 -10.7 -8.9 40 40 I E H X S+ 0 0 128 -4,-2.4 4,-1.6 2,-0.2 -1,-0.2 0.930 115.7 42.3 -61.8 -42.2 19.2 -7.7 -7.4 41 41 I Y H X S+ 0 0 76 -4,-1.8 4,-1.8 2,-0.2 3,-0.4 0.983 115.3 47.7 -68.7 -54.3 22.4 -5.5 -7.4 42 42 I E H X S+ 0 0 37 -4,-2.9 4,-1.8 1,-0.3 -2,-0.2 0.868 107.0 60.1 -55.7 -33.4 23.6 -6.7 -10.8 43 43 I T H X S+ 0 0 24 -4,-2.4 4,-1.2 -5,-0.3 -1,-0.3 0.948 101.4 53.1 -61.7 -44.2 20.1 -6.0 -12.1 44 44 I Q H >< S+ 0 0 129 -4,-1.6 3,-1.4 -3,-0.4 -2,-0.2 0.958 107.1 50.3 -56.4 -49.9 20.5 -2.3 -11.1 45 45 I R H 3< S+ 0 0 147 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.865 107.6 55.5 -59.0 -30.7 23.7 -2.0 -13.0 46 46 I R H 3< 0 0 176 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.762 360.0 360.0 -73.8 -19.7 21.9 -3.5 -16.0 47 47 I R << 0 0 265 -3,-1.4 -1,-0.1 -4,-1.2 0, 0.0 -0.900 360.0 360.0-103.1 360.0 19.3 -0.7 -15.7