==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL CYCLE 13-MAY-03 1OGW . COMPND 2 MOLECULE: UBIQUITIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.ALEXEEV,R.RAMAGE,D.W.YOUNG,L.SAWYER . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4525.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 21.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 40 0, 0.0 16,-2.7 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 153.9 26.6 25.7 2.3 2 2 A Q E +A 16 0A 69 14,-0.2 62,-3.0 12,-0.1 63,-0.3 -0.758 360.0 176.4 -93.3 136.7 27.0 29.3 3.5 3 3 A I E -A 15 0A 0 12,-2.1 12,-2.4 -2,-0.4 2,-0.4 -0.910 21.8-130.1-129.0 164.5 26.3 30.3 7.1 4 4 A F E -Ab 14 66A 58 61,-2.8 63,-2.8 -2,-0.3 2,-0.5 -0.891 8.6-158.5-112.7 142.0 26.8 33.6 8.9 5 5 A V E -Ab 13 67A 0 8,-2.7 8,-2.7 -2,-0.4 2,-0.6 -0.964 10.6-155.9-121.6 109.8 28.5 34.2 12.2 6 6 A K E -Ab 12 68A 80 61,-2.8 63,-2.6 -2,-0.5 6,-0.2 -0.762 12.5-163.2 -87.6 116.7 27.4 37.5 14.0 7 7 A T E > - b 0 69A 21 4,-2.8 3,-0.7 -2,-0.6 63,-0.1 -0.406 30.7-111.3 -90.7 175.2 30.1 38.7 16.4 8 8 A L T 3 S+ 0 0 127 61,-0.5 -1,-0.1 1,-0.2 4,-0.1 0.505 108.7 70.5 -84.6 -4.8 29.6 41.3 19.1 9 9 A T T 3 S- 0 0 123 2,-0.3 -1,-0.2 1,-0.0 3,-0.1 0.626 118.6-101.4 -82.4 -13.0 31.8 43.9 17.3 10 10 A G S < S+ 0 0 72 -3,-0.7 2,-0.4 1,-0.4 -2,-0.1 0.344 87.6 122.7 102.0 -1.6 29.1 44.5 14.6 11 11 A K - 0 0 104 2,-0.0 -4,-2.8 -5,-0.0 2,-0.5 -0.800 43.3-166.0 -93.6 137.2 31.0 42.4 12.2 12 12 A T E -A 6 0A 63 -2,-0.4 2,-0.3 -6,-0.2 -6,-0.2 -0.980 8.2-162.8-118.3 127.7 29.4 39.3 10.6 13 13 A I E -A 5 0A 9 -8,-2.7 -8,-2.7 -2,-0.5 2,-0.4 -0.788 10.5-132.6-113.1 159.9 31.5 36.8 8.8 14 14 A T E -A 4 0A 42 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.832 19.2-170.6-109.6 147.5 30.6 34.2 6.4 15 15 A L E -A 3 0A 11 -12,-2.4 -12,-2.1 -2,-0.4 2,-0.5 -0.977 21.5-137.0-131.2 147.0 31.7 30.5 6.4 16 16 A E E +A 2 0A 123 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.933 44.6 153.3-101.5 125.0 31.4 27.6 4.0 17 17 A V - 0 0 2 -16,-2.7 -2,-0.0 -2,-0.5 3,-0.0 -0.909 40.4-127.9-141.7 163.5 30.4 24.5 6.0 18 18 A E > - 0 0 101 -2,-0.3 3,-2.5 1,-0.1 38,-0.3 -0.942 28.3-121.4-111.8 147.7 28.7 21.1 5.6 19 19 A P T 3 S+ 0 0 44 0, 0.0 38,-2.5 0, 0.0 39,-0.3 0.783 113.7 62.2 -56.1 -24.5 25.9 20.1 8.1 20 20 A S T 3 S+ 0 0 87 36,-0.2 2,-0.1 35,-0.1 -3,-0.0 0.550 80.9 109.9 -75.9 -7.3 28.1 17.0 8.9 21 21 A D S < S- 0 0 31 -3,-2.5 35,-2.2 1,-0.1 36,-0.2 -0.462 71.2-120.2 -69.0 141.5 30.9 19.4 10.3 22 22 A T B > -E 55 0B 52 33,-0.2 4,-2.2 -2,-0.1 33,-0.3 -0.390 18.2-117.2 -74.1 156.5 31.4 19.4 14.0 23 23 A I H > S+ 0 0 0 31,-2.6 4,-2.2 28,-0.5 29,-0.2 0.917 118.7 57.8 -59.8 -38.6 31.1 22.5 16.1 24 24 A E H > S+ 0 0 127 28,-2.4 4,-1.9 30,-0.3 -1,-0.2 0.935 105.0 49.0 -54.3 -48.6 34.8 22.1 16.9 25 25 A N H > S+ 0 0 63 27,-0.3 4,-2.2 1,-0.2 -1,-0.2 0.878 107.5 55.4 -60.9 -38.3 35.6 22.2 13.2 26 26 A V H X S+ 0 0 0 -4,-2.2 4,-1.8 2,-0.2 -1,-0.2 0.928 106.5 50.6 -60.5 -42.2 33.4 25.4 12.8 27 27 A K H X S+ 0 0 9 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.871 107.9 53.5 -64.3 -35.3 35.5 27.1 15.6 28 28 A A H X S+ 0 0 35 -4,-1.9 4,-2.4 2,-0.2 -1,-0.2 0.917 107.3 50.9 -64.0 -41.5 38.6 26.1 13.7 29 29 A K H X S+ 0 0 59 -4,-2.2 4,-1.2 1,-0.2 -2,-0.2 0.870 109.1 51.5 -62.8 -33.6 37.2 27.8 10.6 30 30 A I H X>S+ 0 0 1 -4,-1.8 4,-2.7 2,-0.2 5,-0.7 0.909 108.8 50.1 -71.7 -38.1 36.5 30.9 12.6 31 31 A Q H X5S+ 0 0 82 -4,-2.4 4,-1.7 1,-0.2 -2,-0.2 0.918 108.7 54.4 -64.0 -37.9 40.1 30.9 13.9 32 32 A D H <5S+ 0 0 138 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.796 118.1 32.9 -59.6 -33.9 41.3 30.5 10.3 33 33 A K H <5S+ 0 0 118 -4,-1.2 -2,-0.2 -3,-0.3 -1,-0.2 0.826 136.0 18.9 -96.6 -34.8 39.4 33.6 9.0 34 34 A E H <5S- 0 0 71 -4,-2.7 -3,-0.2 -5,-0.2 -2,-0.2 0.518 94.0-121.6-117.7 -15.1 39.4 35.9 12.0 35 35 A G << + 0 0 52 -4,-1.7 -4,-0.2 -5,-0.7 -3,-0.1 0.486 58.5 145.2 88.2 1.9 42.3 34.7 14.2 36 36 A I - 0 0 27 -6,-0.5 -1,-0.2 1,-0.1 -2,-0.1 -0.614 53.0-117.2 -78.1 122.1 40.2 34.0 17.4 37 37 A P > - 0 0 41 0, 0.0 3,-1.9 0, 0.0 4,-0.4 -0.355 20.1-126.5 -58.0 135.9 41.4 31.0 19.5 38 38 A P G > S+ 0 0 44 0, 0.0 3,-2.0 0, 0.0 -10,-0.1 0.849 106.0 62.9 -51.7 -38.6 38.7 28.2 19.7 39 39 A D G 3 S+ 0 0 100 1,-0.3 33,-0.1 32,-0.0 -3,-0.0 0.671 101.5 53.5 -70.1 -8.2 38.7 28.0 23.5 40 40 A Q G < S+ 0 0 17 -3,-1.9 32,-2.3 31,-0.1 2,-0.5 0.523 90.8 100.1 -92.5 -7.7 37.5 31.7 23.6 41 41 A Q E < -C 71 0A 0 -3,-2.0 2,-0.5 -4,-0.4 30,-0.2 -0.723 44.6-178.9 -95.0 124.5 34.5 31.0 21.3 42 42 A R E -C 70 0A 85 28,-2.5 28,-2.7 -2,-0.5 2,-0.4 -0.983 14.8-162.1-112.2 120.0 31.0 30.5 22.6 43 43 A L E -C 69 0A 0 -2,-0.5 7,-2.9 7,-0.4 2,-0.4 -0.873 5.6-169.1-106.5 133.8 28.6 29.8 19.7 44 44 A I E +CD 68 49A 38 24,-2.4 24,-2.8 -2,-0.4 2,-0.3 -0.978 11.2 168.4-125.4 136.5 24.8 30.3 20.1 45 45 A F E > S- D 0 48A 37 3,-2.3 3,-2.1 -2,-0.4 22,-0.1 -0.975 72.1 -5.0-145.0 133.2 21.9 29.2 17.9 46 46 A A T 3 S- 0 0 63 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.891 129.7 -56.8 53.4 42.4 18.2 29.1 18.7 47 47 A G T 3 S+ 0 0 79 1,-0.2 2,-0.4 -3,-0.0 -1,-0.3 0.531 115.1 117.4 71.0 7.4 19.0 30.1 22.2 48 48 A K E < -D 45 0A 101 -3,-2.1 -3,-2.3 11,-0.1 2,-0.4 -0.879 65.3-129.1-110.5 134.4 21.3 27.0 22.7 49 49 A Q E -D 44 0A 104 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.698 35.4-122.2 -78.7 132.0 25.0 27.0 23.4 50 50 A X - 0 0 2 -7,-2.9 -7,-0.4 -2,-0.4 2,-0.4 -0.615 17.4-136.0 -86.1 132.3 26.7 24.7 20.8 51 51 A E > - 0 0 115 -2,-0.4 3,-1.4 1,-0.1 -28,-0.5 -0.657 12.5-130.4 -86.6 129.0 28.7 21.7 22.0 52 52 A D T 3 S+ 0 0 72 -2,-0.4 -28,-2.4 1,-0.2 -29,-0.3 0.799 102.6 50.6 -51.5 -37.4 32.1 21.0 20.3 53 53 A G T 3 S+ 0 0 49 -30,-0.2 -1,-0.2 -31,-0.1 2,-0.1 0.588 96.1 81.5 -82.8 -11.9 31.5 17.3 19.7 54 54 A R S < S- 0 0 116 -3,-1.4 -31,-2.6 1,-0.1 -30,-0.3 -0.409 76.6-120.4 -83.4 168.5 28.0 17.6 18.0 55 55 A T B >> -E 22 0B 25 -33,-0.3 4,-0.8 -32,-0.1 3,-0.6 -0.696 22.7-110.0-107.3 163.7 27.5 18.5 14.4 56 56 A L G >4>S+ 0 0 0 -35,-2.2 5,-1.8 -38,-0.3 3,-1.2 0.914 120.0 57.0 -53.8 -41.1 25.6 21.4 12.8 57 57 A S G >45S+ 0 0 62 -38,-2.5 3,-1.7 1,-0.3 -1,-0.2 0.843 94.9 63.6 -61.4 -34.6 23.0 18.9 11.7 58 58 A D G <45S+ 0 0 97 -3,-0.6 -1,-0.3 -39,-0.3 -2,-0.2 0.772 108.6 43.6 -57.6 -30.1 22.3 17.8 15.3 59 59 A Y G <<5S- 0 0 31 -3,-1.2 -1,-0.3 -4,-0.8 -2,-0.2 0.274 113.9-118.2 -98.5 3.8 21.1 21.4 15.9 60 60 A N T < 5 + 0 0 115 -3,-1.7 2,-0.7 1,-0.2 -3,-0.2 0.862 50.4 169.5 59.3 37.7 19.1 21.6 12.7 61 61 A I < - 0 0 2 -5,-1.8 -1,-0.2 -42,-0.1 2,-0.1 -0.781 13.3-170.4 -83.8 113.5 21.3 24.5 11.4 62 62 A Q > - 0 0 114 -2,-0.7 3,-1.5 1,-0.2 -1,-0.0 -0.397 33.4 -58.1 -99.2 174.5 20.3 24.9 7.7 63 63 A K T 3 S+ 0 0 145 1,-0.2 -1,-0.2 -2,-0.1 -60,-0.2 -0.214 119.7 14.9 -57.0 141.8 21.7 27.0 4.9 64 64 A E T 3 S+ 0 0 93 -62,-3.0 -1,-0.2 1,-0.2 -61,-0.2 0.571 90.3 147.2 71.1 14.1 22.0 30.8 5.4 65 65 A S < - 0 0 24 -3,-1.5 -61,-2.8 -63,-0.3 2,-0.5 -0.365 43.0-129.3 -69.4 158.8 21.5 30.5 9.2 66 66 A T E -b 4 0A 43 -63,-0.2 2,-0.3 -61,-0.1 -61,-0.2 -0.968 16.6-164.8-115.5 126.0 23.2 32.9 11.6 67 67 A X E -b 5 0A 0 -63,-2.8 -61,-2.8 -2,-0.5 2,-0.5 -0.800 19.2-129.6 -97.5 153.5 25.2 31.8 14.6 68 68 A H E -bC 6 44A 84 -24,-2.8 -24,-2.4 -2,-0.3 2,-0.6 -0.897 16.7-155.6-105.0 129.9 26.0 34.2 17.4 69 69 A L E +bC 7 43A 4 -63,-2.6 -61,-0.5 -2,-0.5 2,-0.4 -0.913 14.4 176.4-109.8 117.4 29.7 34.4 18.6 70 70 A V E - C 0 42A 28 -28,-2.7 -28,-2.5 -2,-0.6 2,-0.4 -0.946 22.8-136.7-114.6 136.1 30.4 35.6 22.1 71 71 A L E - C 0 41A 41 -2,-0.4 -30,-0.2 4,-0.4 2,-0.2 -0.815 18.8-158.2-101.3 134.9 34.0 35.6 23.3 72 72 A R > - 0 0 88 -32,-2.3 2,-3.2 -2,-0.4 3,-1.6 -0.606 56.9 -4.9-100.9 167.2 34.9 34.4 26.8 73 73 A L T 3 S+ 0 0 136 1,-0.3 -33,-0.1 -2,-0.2 -2,-0.0 -0.196 139.2 15.9 60.0 -63.3 37.8 34.9 29.3 74 74 A R T 3 S+ 0 0 144 -2,-3.2 -1,-0.3 1,-0.0 -3,-0.1 0.811 130.4 44.6-106.8 -43.8 40.1 36.9 27.0 75 75 A G < 0 0 36 -3,-1.6 -4,-0.4 -35,-0.1 -2,-0.2 0.276 360.0 360.0 -86.2 8.6 37.9 38.1 24.1 76 76 A G 0 0 109 -6,-0.1 -4,-0.2 -4,-0.1 -36,-0.0 -0.109 360.0 360.0-144.7 360.0 35.0 39.1 26.5