==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 05-JAN-07 2OGH . COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR EIF-1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.REIBARKH,F.DEL RIO,Y.YAMAMOTO,K.ASANO,G.WAGNER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9621.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 14.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 18.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 230 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 156.7 -14.2 -24.2 -49.2 2 2 A S - 0 0 80 0, 0.0 2,-0.4 0, 0.0 4,-0.0 -0.658 360.0-121.0-123.9-179.8 -15.8 -24.8 -45.9 3 3 A I S S- 0 0 139 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.740 79.2 -47.9-129.1 84.4 -19.3 -25.0 -44.4 4 4 A E S S+ 0 0 191 -2,-0.4 -1,-0.1 1,-0.1 0, 0.0 0.983 92.3 130.6 53.3 70.3 -19.9 -22.5 -41.7 5 5 A N + 0 0 129 3,-0.0 2,-0.3 0, 0.0 3,-0.2 0.013 35.6 109.4-139.3 27.2 -16.7 -23.1 -39.7 6 6 A L + 0 0 142 1,-0.2 0, 0.0 -4,-0.0 0, 0.0 -0.761 68.8 22.6-107.8 154.0 -15.4 -19.6 -39.2 7 7 A K S S- 0 0 194 -2,-0.3 2,-0.3 1,-0.1 -1,-0.2 0.991 77.9-158.6 56.8 70.8 -15.2 -17.5 -36.0 8 8 A S - 0 0 101 -3,-0.2 2,-0.2 1,-0.0 -1,-0.1 -0.603 7.8-131.1 -83.2 139.4 -15.3 -20.4 -33.4 9 9 A F - 0 0 199 -2,-0.3 -1,-0.0 0, 0.0 -2,-0.0 -0.572 23.1-168.5 -89.4 153.1 -16.4 -19.5 -29.9 10 10 A D - 0 0 131 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.939 21.9-101.9-139.3 160.5 -14.5 -20.6 -26.8 11 11 A P - 0 0 118 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.039 23.9-178.9 -69.7-176.6 -15.1 -20.7 -23.0 12 12 A F - 0 0 195 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.365 13.7-177.4-152.1 -46.7 -13.7 -18.3 -20.4 13 13 A A - 0 0 81 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.025 24.2-105.5 62.3-172.1 -14.7 -19.3 -16.9 14 14 A D - 0 0 157 1,-0.0 2,-0.1 0, 0.0 -2,-0.0 -0.885 21.4-103.2-144.5 174.2 -13.8 -17.2 -13.8 15 15 A T - 0 0 138 -2,-0.3 2,-0.5 1,-0.0 -1,-0.0 -0.232 30.6-114.3 -92.1-175.8 -11.5 -17.2 -10.8 16 16 A G - 0 0 65 -2,-0.1 -1,-0.0 2,-0.0 0, 0.0 -0.929 22.7-149.7-130.1 110.6 -12.2 -18.0 -7.2 17 17 A D - 0 0 134 -2,-0.5 2,-0.2 2,-0.0 0, 0.0 -0.082 16.1-179.2 -66.8 172.2 -11.9 -15.3 -4.5 18 18 A D - 0 0 142 0, 0.0 2,-0.5 0, 0.0 -2,-0.0 -0.694 14.7-155.3-178.3 121.0 -10.9 -16.1 -0.9 19 19 A E + 0 0 112 -2,-0.2 3,-0.1 1,-0.2 -2,-0.0 -0.898 11.2 177.1-108.1 129.5 -10.5 -14.0 2.3 20 20 A T - 0 0 134 -2,-0.5 2,-0.2 1,-0.2 -1,-0.2 0.908 68.4 -29.0 -91.7 -57.0 -8.2 -15.1 5.1 21 21 A A - 0 0 73 3,-0.0 2,-0.4 0, 0.0 3,-0.3 -0.807 53.2-150.3-168.6 122.8 -8.5 -12.2 7.6 22 22 A T + 0 0 78 -2,-0.2 80,-0.1 1,-0.2 -3,-0.0 -0.811 54.3 100.5-100.5 136.1 -9.1 -8.5 7.2 23 23 A S S S- 0 0 68 -2,-0.4 80,-0.2 0, 0.0 2,-0.2 0.169 90.4 -3.9-177.3 -36.1 -7.6 -6.0 9.6 24 24 A N + 0 0 85 -3,-0.3 79,-0.2 78,-0.2 3,-0.2 -0.623 42.6 174.1-178.6 113.7 -4.6 -4.4 8.1 25 25 A Y S S+ 0 0 74 77,-0.7 2,-0.3 1,-0.3 78,-0.2 0.705 83.4 19.4 -95.5 -25.6 -2.8 -5.1 4.8 26 26 A I E S-a 103 0A 2 76,-0.6 78,-1.6 74,-0.0 2,-0.3 -0.934 70.2-147.2-150.9 122.8 -0.3 -2.2 5.0 27 27 A H E -aB 104 43A 33 16,-1.6 16,-1.7 -2,-0.3 2,-0.3 -0.701 16.4-179.1 -91.4 140.2 0.8 -0.2 8.1 28 28 A I E +aB 105 42A 29 76,-2.8 78,-1.8 -2,-0.3 2,-0.5 -0.906 4.2 174.1-144.2 112.1 1.7 3.5 7.8 29 29 A R E - B 0 41A 74 12,-1.5 12,-3.2 -2,-0.3 2,-0.3 -0.972 12.0-160.6-123.0 122.8 2.8 5.7 10.6 30 30 A I E - B 0 40A 68 -2,-0.5 2,-0.3 76,-0.4 10,-0.2 -0.729 8.0-176.1-101.3 150.5 4.0 9.3 10.2 31 31 A Q E + B 0 39A 49 8,-2.1 8,-1.1 -2,-0.3 2,-0.3 -0.980 7.8 162.5-149.1 132.6 6.2 11.3 12.6 32 32 A Q - 0 0 75 -2,-0.3 6,-0.1 6,-0.1 -2,-0.0 -0.938 35.7-142.0-144.5 165.5 7.4 14.9 12.6 33 33 A R - 0 0 192 4,-0.5 4,-0.1 -2,-0.3 5,-0.1 -0.010 56.7-102.3-118.3 26.8 8.8 17.6 14.9 34 34 A N S S+ 0 0 167 1,-0.1 -2,-0.0 3,-0.1 3,-0.0 0.904 102.1 80.7 53.6 45.0 6.9 20.5 13.4 35 35 A G S S- 0 0 59 2,-0.2 -1,-0.1 0, 0.0 3,-0.1 0.278 102.6 -72.2-136.3 -93.8 10.1 21.6 11.6 36 36 A R S S+ 0 0 226 1,-0.1 2,-0.4 -3,-0.0 -2,-0.1 0.425 90.0 102.3-146.6 -45.4 11.4 20.2 8.3 37 37 A K - 0 0 167 -4,-0.1 -4,-0.5 1,-0.1 2,-0.4 -0.334 57.4-162.0 -55.1 107.4 12.8 16.7 8.9 38 38 A T + 0 0 36 -2,-0.4 44,-1.3 -6,-0.1 2,-0.4 -0.806 12.2 177.9 -99.4 135.4 10.1 14.5 7.5 39 39 A L E -BC 31 81A 22 -8,-1.1 -8,-2.1 -2,-0.4 2,-0.4 -0.999 6.9-179.2-138.9 140.0 9.9 10.8 8.4 40 40 A T E -BC 30 80A 11 40,-1.9 40,-2.4 -2,-0.4 2,-0.3 -0.988 10.7-154.7-142.8 129.9 7.4 8.0 7.5 41 41 A T E -BC 29 79A 8 -12,-3.2 -12,-1.5 -2,-0.4 2,-0.3 -0.710 12.7-177.3-102.9 154.4 7.3 4.4 8.6 42 42 A V E +BC 28 78A 6 36,-2.3 36,-1.7 -2,-0.3 2,-0.3 -0.995 4.3 178.5-149.9 151.0 5.7 1.4 6.7 43 43 A Q E +B 27 0A 33 -16,-1.7 -16,-1.6 -2,-0.3 61,-0.1 -0.956 48.9 73.1-148.3 164.8 5.2 -2.3 7.2 44 44 A G + 0 0 32 -2,-0.3 -1,-0.1 32,-0.3 33,-0.1 0.525 55.5 163.3 104.7 9.5 3.5 -5.3 5.5 45 45 A V - 0 0 37 -3,-0.1 -1,-0.3 1,-0.1 6,-0.1 -0.388 34.2-124.9 -64.6 133.5 6.1 -5.7 2.7 46 46 A P > - 0 0 56 0, 0.0 3,-0.7 0, 0.0 -1,-0.1 -0.040 22.7-104.3 -69.8 177.1 5.9 -9.1 1.0 47 47 A E T 3 S+ 0 0 166 1,-0.2 3,-0.1 3,-0.0 -2,-0.1 0.808 115.9 69.9 -74.1 -30.8 8.8 -11.5 0.6 48 48 A E T 3 S+ 0 0 175 1,-0.2 2,-0.5 2,-0.0 -1,-0.2 0.701 103.2 49.9 -59.8 -18.4 9.2 -10.6 -3.1 49 49 A Y S < S- 0 0 36 -3,-0.7 -1,-0.2 4,-0.0 2,-0.1 -0.909 76.3-173.2-128.4 104.7 10.5 -7.3 -1.8 50 50 A D > - 0 0 97 -2,-0.5 4,-1.8 -3,-0.1 5,-0.2 -0.237 42.1 -99.8 -86.0 178.6 13.2 -7.3 0.9 51 51 A L H > S+ 0 0 42 1,-0.2 4,-1.4 2,-0.2 5,-0.1 0.765 124.5 51.8 -70.5 -25.4 14.6 -4.4 2.8 52 52 A K H > S+ 0 0 169 2,-0.2 4,-1.5 3,-0.2 -1,-0.2 0.823 109.4 48.4 -79.5 -33.5 17.6 -4.3 0.4 53 53 A R H > S+ 0 0 137 2,-0.2 4,-1.6 1,-0.2 -2,-0.2 0.840 116.5 42.6 -74.9 -34.6 15.4 -4.2 -2.7 54 54 A I H X S+ 0 0 20 -4,-1.8 4,-1.9 2,-0.2 5,-0.2 0.815 116.2 47.9 -80.3 -32.6 13.3 -1.4 -1.3 55 55 A L H X S+ 0 0 54 -4,-1.4 4,-1.5 -5,-0.2 11,-0.2 0.795 115.0 45.9 -77.3 -29.8 16.3 0.5 0.1 56 56 A K H X S+ 0 0 131 -4,-1.5 4,-1.4 2,-0.2 -2,-0.2 0.866 117.2 42.5 -79.8 -39.3 18.2 0.2 -3.2 57 57 A V H X S+ 0 0 28 -4,-1.6 4,-1.9 2,-0.2 -2,-0.2 0.875 118.2 45.7 -74.3 -39.0 15.2 1.1 -5.4 58 58 A L H X S+ 0 0 21 -4,-1.9 4,-2.0 2,-0.2 6,-1.8 0.919 116.2 44.5 -70.1 -45.1 14.1 3.9 -3.2 59 59 A K H X S+ 0 0 99 -4,-1.5 4,-0.9 4,-0.3 -1,-0.2 0.820 118.6 44.7 -68.6 -31.3 17.6 5.3 -2.7 60 60 A K H < S+ 0 0 176 -4,-1.4 -2,-0.2 2,-0.2 -1,-0.2 0.785 113.5 51.6 -82.4 -29.7 18.3 4.9 -6.5 61 61 A D H < S- 0 0 73 -4,-1.9 -2,-0.2 -5,-0.1 -3,-0.2 0.995 143.5 -22.9 -69.5 -66.6 14.9 6.4 -7.4 62 62 A F H < S- 0 0 119 -4,-2.0 -3,-0.2 -5,-0.1 -2,-0.2 -0.102 95.8 -91.5-140.4 36.5 14.9 9.6 -5.5 63 63 A A < + 0 0 75 -4,-0.9 2,-0.9 1,-0.2 -4,-0.3 0.948 63.2 171.2 51.1 56.9 17.4 9.0 -2.7 64 64 A C - 0 0 4 -6,-1.8 2,-0.4 -9,-0.1 -5,-0.2 -0.795 31.4-137.2-102.2 93.6 14.7 7.7 -0.3 65 65 A N + 0 0 61 -2,-0.9 16,-2.8 16,-0.2 2,-0.6 -0.278 27.4 179.9 -51.3 105.2 16.5 6.3 2.7 66 66 A G E +D 80 0A 0 -2,-0.4 14,-0.2 -11,-0.2 -1,-0.1 -0.695 14.0 155.7-115.3 79.7 14.5 3.1 3.3 67 67 A N E -D 79 0A 53 12,-1.3 12,-0.7 -2,-0.6 2,-0.3 -0.268 35.5-115.2 -92.7-177.8 15.9 1.3 6.3 68 68 A I E -D 78 0A 75 10,-0.3 2,-0.3 -2,-0.1 10,-0.2 -0.872 25.8-174.4-121.6 155.0 14.4 -1.1 8.8 69 69 A V E -D 77 0A 54 8,-0.9 8,-1.1 -2,-0.3 2,-0.5 -0.905 23.1-123.6-141.4 168.6 13.6 -1.0 12.5 70 70 A K - 0 0 175 -2,-0.3 -2,-0.0 6,-0.2 8,-0.0 -0.940 27.9-173.9-122.2 110.8 12.3 -3.2 15.4 71 71 A D > - 0 0 70 -2,-0.5 3,-0.7 1,-0.1 -2,-0.0 -0.639 36.9-117.4-100.9 159.3 9.3 -2.0 17.3 72 72 A P T 3 S+ 0 0 137 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.554 113.8 61.0 -69.8 -7.1 7.7 -3.5 20.5 73 73 A E T 3 S- 0 0 168 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.777 137.4 -31.0 -89.3 -31.4 4.6 -4.1 18.4 74 74 A M S < S- 0 0 140 -3,-0.7 -4,-0.1 3,-0.0 0, 0.0 0.303 70.9-120.8-149.2 -66.4 6.3 -6.4 15.8 75 75 A G S S+ 0 0 27 -6,-0.1 -5,-0.1 0, 0.0 0, 0.0 0.692 87.8 80.8 114.9 33.1 9.9 -5.8 15.1 76 76 A E + 0 0 99 -8,-0.0 2,-1.0 2,-0.0 -32,-0.3 -0.050 46.3 155.4-157.4 39.7 10.0 -5.0 11.4 77 77 A I E - D 0 69A 16 -8,-1.1 -8,-0.9 -34,-0.1 2,-0.9 -0.644 37.5-142.0 -78.7 103.9 9.0 -1.4 10.9 78 78 A I E -CD 42 68A 3 -36,-1.7 -36,-2.3 -2,-1.0 2,-0.4 -0.542 15.7-149.7 -69.8 105.1 10.5 -0.3 7.6 79 79 A Q E -CD 41 67A 63 -2,-0.9 -12,-1.3 -12,-0.7 2,-0.5 -0.643 15.1-173.7 -80.7 126.7 11.6 3.3 8.2 80 80 A L E -CD 40 66A 3 -40,-2.4 -40,-1.9 -2,-0.4 2,-0.3 -0.950 5.3-161.7-126.8 112.8 11.5 5.5 5.1 81 81 A Q E +C 39 0A 76 -16,-2.8 -42,-0.2 -2,-0.5 -16,-0.2 -0.668 42.9 75.9 -92.8 146.3 12.8 9.0 5.2 82 82 A G S S- 0 0 20 -44,-1.3 2,-1.1 -2,-0.3 3,-0.1 -0.431 82.7 -90.1 132.8 152.8 11.9 11.7 2.6 83 83 A D S S+ 0 0 126 1,-0.2 3,-0.1 -2,-0.2 -2,-0.1 -0.295 94.1 99.4 -88.2 50.4 9.1 14.0 1.6 84 84 A Q > + 0 0 59 -2,-1.1 4,-2.5 1,-0.1 -1,-0.2 -0.279 32.4 136.1-130.0 47.1 7.6 11.4 -0.7 85 85 A R H > S+ 0 0 147 1,-0.2 4,-1.8 2,-0.2 3,-0.3 0.975 77.4 46.3 -57.5 -60.0 4.7 9.9 1.4 86 86 A A H > S+ 0 0 74 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.772 113.2 54.2 -54.6 -26.4 2.2 9.9 -1.4 87 87 A K H > S+ 0 0 100 2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.909 104.4 50.9 -75.1 -44.3 4.9 8.4 -3.5 88 88 A V H X S+ 0 0 24 -4,-2.5 4,-1.4 -3,-0.3 -2,-0.2 0.803 113.8 47.0 -63.3 -29.4 5.6 5.5 -1.1 89 89 A C H X S+ 0 0 40 -4,-1.8 4,-1.8 -5,-0.2 -1,-0.2 0.852 114.1 45.4 -80.2 -37.3 1.9 4.7 -1.1 90 90 A E H X S+ 0 0 134 -4,-1.6 4,-1.6 -5,-0.2 -2,-0.2 0.831 118.4 43.3 -74.6 -33.3 1.5 4.9 -4.9 91 91 A F H X S+ 0 0 83 -4,-2.7 4,-1.3 2,-0.2 -2,-0.2 0.824 113.5 51.5 -80.6 -33.8 4.6 2.8 -5.5 92 92 A M H X S+ 0 0 24 -4,-1.4 4,-1.6 -5,-0.3 -2,-0.2 0.910 117.0 38.5 -69.3 -43.7 3.8 0.3 -2.7 93 93 A I H X>S+ 0 0 29 -4,-1.8 5,-3.1 2,-0.2 4,-1.6 0.886 116.9 50.3 -74.0 -40.6 0.2 -0.3 -4.0 94 94 A S H <5S+ 0 0 84 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.765 118.5 40.3 -68.7 -25.2 1.3 -0.2 -7.7 95 95 A Q H <5S+ 0 0 115 -4,-1.3 -2,-0.2 1,-0.1 -1,-0.2 0.720 112.9 53.8 -93.6 -26.5 4.0 -2.7 -6.9 96 96 A L H <5S- 0 0 50 -4,-1.6 -2,-0.2 -5,-0.1 -3,-0.2 0.738 122.4-101.0 -79.3 -24.1 2.0 -4.8 -4.5 97 97 A G T <5S- 0 0 52 -4,-1.6 -3,-0.2 -5,-0.1 -4,-0.1 0.797 74.5 -47.4 105.4 43.0 -0.7 -5.3 -7.1 98 98 A L S