==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 28-MAY-03 1OHM . COMPND 2 MOLECULE: BACTERIOCIN SAKACIN P; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS SAKE; . AUTHOR M.UTENG,H.H.HAUGE,P.R.MARKWICK,G.FIMLAND,D.MANTZILAS, . 44 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3501.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 52.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 31.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 170 0, 0.0 8,-0.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 -75.8 13.7 3.9 6.9 2 2 A Y - 0 0 161 6,-2.5 2,-0.2 1,-0.4 7,-0.2 0.576 360.0 -7.9-111.6 -28.3 16.7 4.6 4.5 3 3 A Y - 0 0 144 5,-2.1 -1,-0.4 1,-0.0 4,-0.1 -0.732 64.0-174.2-137.5-169.4 14.4 6.7 2.3 4 4 A G + 0 0 38 2,-0.3 2,-0.4 -2,-0.2 3,-0.2 0.502 56.6 82.7-176.8 18.8 10.6 7.3 2.4 5 5 A N S S- 0 0 132 1,-0.7 -1,-0.1 2,-0.4 12,-0.1 -0.776 117.8 -2.0-129.6 81.1 8.9 9.3 -0.4 6 6 A G S S+ 0 0 46 -2,-0.4 -1,-0.7 10,-0.2 -2,-0.3 0.668 141.6 4.6 79.6 105.0 8.5 6.7 -3.1 7 7 A V - 0 0 50 -3,-0.2 -2,-0.4 -4,-0.1 9,-0.2 0.661 58.8-146.1 51.4 150.0 10.1 3.5 -1.6 8 8 A H - 0 0 69 7,-2.7 -6,-2.5 -4,-0.2 -5,-2.1 0.743 69.3 -41.2-112.0 -36.0 11.5 3.0 2.0 9 9 A a - 0 0 27 6,-0.6 2,-0.2 -7,-0.2 -1,-0.1 -0.610 58.2-114.1-153.9-128.6 14.4 0.6 1.3 10 10 A G > - 0 0 27 -2,-0.2 3,-2.3 5,-0.1 5,-0.0 -0.669 69.6 -23.6-155.3-157.4 15.4 -2.5 -0.8 11 11 A K T 3 S+ 0 0 218 1,-0.3 -2,-0.0 -2,-0.2 0, 0.0 0.658 116.5 81.8 -48.9 -20.5 16.4 -6.2 -0.5 12 12 A H T 3 S- 0 0 143 1,-0.1 -1,-0.3 3,-0.0 -3,-0.0 0.901 123.3 -85.5 -37.8 -57.8 17.5 -5.3 3.0 13 13 A S S < S+ 0 0 87 -3,-2.3 -2,-0.1 0, 0.0 -4,-0.1 0.032 108.5 69.6 172.6 -45.0 13.9 -5.6 4.2 14 14 A a + 0 0 27 1,-0.1 -3,-0.1 -6,-0.1 -7,-0.1 0.993 46.4 131.1 -74.4 -74.0 11.9 -2.4 3.6 15 15 A T + 0 0 50 1,-0.1 -7,-2.7 2,-0.1 -6,-0.6 -0.335 28.1 134.5 52.9-127.4 11.2 -1.6 -0.1 16 16 A V + 0 0 35 -9,-0.2 -10,-0.2 -8,-0.1 -9,-0.1 0.959 16.0 144.1 48.8 95.5 7.5 -0.7 -0.6 17 17 A D S S+ 0 0 106 -10,-0.2 4,-0.2 -11,-0.2 -1,-0.1 0.260 97.5 35.2 -98.0 -1.8 6.1 2.2 -2.5 18 18 A W S > S+ 0 0 144 2,-0.1 4,-2.5 3,-0.1 5,-0.3 0.721 96.7 70.9-121.9 -36.6 3.3 -0.5 -3.3 19 19 A G H > S+ 0 0 23 1,-0.2 4,-1.1 2,-0.2 5,-0.0 0.753 100.2 52.6 -74.0 -22.1 2.6 -2.9 -0.4 20 20 A T H > S+ 0 0 91 2,-0.2 4,-2.7 3,-0.2 -1,-0.2 0.957 110.8 48.2 -65.1 -53.7 0.8 -0.2 1.7 21 21 A A H > S+ 0 0 26 1,-0.2 4,-2.4 2,-0.2 23,-0.2 0.937 114.6 43.7 -54.1 -54.4 -1.4 0.7 -1.3 22 22 A I H X S+ 0 0 101 -4,-2.5 4,-2.8 1,-0.2 -1,-0.2 0.797 112.3 55.8 -63.9 -26.3 -2.3 -3.1 -2.0 23 23 A G H X S+ 0 0 38 -4,-1.1 4,-1.8 -5,-0.3 5,-0.3 0.934 108.0 46.8 -66.7 -49.0 -2.8 -3.4 1.9 24 24 A b H X S+ 0 0 27 -4,-2.7 4,-1.9 2,-0.2 5,-0.3 0.973 119.0 42.5 -51.5 -58.1 -5.4 -0.5 1.9 25 25 A I H X S+ 0 0 62 -4,-2.4 4,-2.8 2,-0.2 -2,-0.2 0.935 113.5 48.7 -49.5 -64.0 -7.1 -2.1 -1.2 26 26 A G H X S+ 0 0 42 -4,-2.8 4,-1.9 1,-0.2 5,-0.2 0.884 114.6 43.9 -61.6 -43.3 -7.1 -5.8 -0.1 27 27 A N H X S+ 0 0 116 -4,-1.8 4,-1.4 -5,-0.2 -1,-0.2 0.957 118.8 40.4 -61.6 -58.9 -8.4 -5.2 3.4 28 28 A N H X S+ 0 0 51 -4,-1.9 4,-1.2 -5,-0.3 8,-0.3 0.837 113.2 57.8 -70.1 -29.5 -11.2 -2.8 2.6 29 29 A A H >X S+ 0 0 7 -4,-2.8 4,-3.3 -5,-0.3 3,-1.9 0.995 109.1 40.3 -56.8 -73.0 -12.2 -4.7 -0.5 30 30 A A H 3< S+ 0 0 86 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.714 110.7 61.4 -61.7 -17.5 -12.9 -8.1 1.1 31 31 A A H 3< S+ 0 0 73 -4,-1.4 -1,-0.3 -5,-0.2 -2,-0.2 0.822 128.2 8.6 -65.5 -35.1 -14.6 -6.2 4.0 32 32 A N H << S- 0 0 117 -3,-1.9 -2,-0.2 -4,-1.2 -3,-0.2 0.745 127.7 -57.0-110.7 -38.5 -17.2 -4.7 1.5 33 33 A W S < S- 0 0 183 -4,-3.3 -4,-0.0 -5,-0.3 -1,-0.0 -0.428 87.0 -48.3-178.6-126.0 -16.9 -6.3 -1.9 34 34 A A S S+ 0 0 55 -2,-0.1 -5,-0.2 -3,-0.1 -4,-0.2 0.355 137.1 14.2-126.4 -14.8 -13.8 -6.5 -4.2 35 35 A T S > S- 0 0 67 -6,-0.3 4,-1.9 -7,-0.2 3,-0.4 -0.174 117.3 -81.7-158.2 57.9 -13.0 -2.7 -3.9 36 36 A G T 4 - 0 0 8 1,-0.3 2,-0.7 -8,-0.3 4,-0.4 0.674 66.8 -87.6 76.7 10.1 -15.0 -1.1 -1.0 37 37 A G T 4 S+ 0 0 61 1,-0.2 -1,-0.3 2,-0.1 -8,-0.0 0.033 125.9 14.2 68.0 -28.9 -18.3 -0.6 -2.9 38 38 A N T 4 S- 0 0 132 -2,-0.7 -2,-0.2 -3,-0.4 -1,-0.2 0.226 103.4-109.2-153.6 7.3 -16.8 2.8 -4.1 39 39 A A S >X S+ 0 0 25 -4,-1.9 4,-1.1 1,-0.1 3,-0.8 0.610 75.8 137.1 52.6 20.0 -13.0 2.8 -3.3 40 40 A G T 34 + 0 0 49 -4,-0.4 -1,-0.1 1,-0.2 -4,-0.1 0.269 29.4 105.7 -75.8 8.5 -13.9 5.3 -0.5 41 41 A W T 34 S- 0 0 47 -6,-0.1 -1,-0.2 1,-0.1 -5,-0.0 0.936 114.9 -82.4 -56.3 -47.2 -11.6 3.6 2.1 42 42 A N T <4 - 0 0 111 -3,-0.8 -2,-0.2 0, 0.0 -1,-0.1 0.199 56.6-120.4-164.5 3.7 -9.4 6.6 1.4 43 43 A K < 0 0 137 -4,-1.1 -22,-0.1 -22,-0.1 -3,-0.1 0.958 360.0 360.0 -41.7 144.1 -8.0 5.3 -1.5 44 44 A b 0 0 92 -23,-0.2 -23,-0.1 -24,-0.1 -22,-0.1 0.870 360.0 360.0 -66.9 360.0 -4.2 5.0 -1.1