==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 28-MAY-03 1OHN . COMPND 2 MOLECULE: BACTERIOCIN SAKACIN P; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS SAKE; . AUTHOR M.UTENG,H.H.HAUGE,P.R.MARKWICK,G.FIMLAND,D.MANTZILAS, . 43 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3592.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 53.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 30.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 157 0, 0.0 3,-0.2 0, 0.0 8,-0.1 0.000 360.0 360.0 360.0 -45.2 -16.2 4.7 -4.5 2 2 A Y + 0 0 181 5,-0.1 5,-0.0 1,-0.1 0, 0.0 0.263 360.0 109.2-114.9 7.3 -12.7 6.0 -3.3 3 3 A Y S S- 0 0 202 3,-0.0 2,-0.2 4,-0.0 -1,-0.1 0.591 76.6 -11.4 -76.2 -16.8 -13.4 9.5 -1.8 4 4 A G S S- 0 0 20 -3,-0.2 13,-0.3 0, 0.0 4,-0.3 -0.583 92.0 -26.7-159.7-155.4 -12.9 9.1 2.0 5 5 A N S S- 0 0 151 1,-0.2 12,-0.3 -2,-0.2 11,-0.1 0.897 118.1 -10.8 -52.5 -65.0 -12.5 7.1 5.3 6 6 A G S S+ 0 0 35 10,-0.1 -1,-0.2 9,-0.1 10,-0.1 0.366 99.8 104.7-123.6 -0.8 -14.0 3.6 4.9 7 7 A V + 0 0 50 8,-0.1 2,-0.7 1,-0.1 -5,-0.1 0.872 57.5 81.9 -59.4 -53.2 -16.0 3.7 1.6 8 8 A H - 0 0 3 -4,-0.3 8,-0.5 6,-0.1 2,-0.3 -0.425 64.5-170.5 -58.4 97.0 -13.7 1.7 -0.8 9 9 A a + 0 0 60 -2,-0.7 2,-0.2 5,-0.2 -1,-0.1 -0.770 29.7 141.0-138.3 88.6 -14.6 -1.9 0.0 10 10 A G >> + 0 0 34 -2,-0.3 5,-1.3 6,-0.0 4,-1.2 -0.419 60.5 17.5 90.8 84.4 -12.5 -3.4 -1.5 11 11 A K T 45S- 0 0 163 1,-0.2 2,-0.9 -2,-0.2 -2,-0.1 0.486 106.1 -98.3 61.5 9.9 -10.7 -6.5 -0.0 12 12 A H T 45S+ 0 0 187 1,-0.2 -1,-0.2 0, 0.0 -3,-0.0 -0.001 124.5 76.3 64.1 -23.9 -13.7 -7.0 2.5 13 13 A S T 45S- 0 0 94 -2,-0.9 -2,-0.2 -3,-0.1 -1,-0.2 0.484 114.2-114.1 -75.7 -10.0 -11.4 -5.2 5.2 14 14 A a T <5 - 0 0 43 -4,-1.2 2,-0.5 1,-0.1 -5,-0.2 0.998 28.9-134.5 59.6 78.8 -12.3 -2.0 3.4 15 15 A T < - 0 0 46 -5,-1.3 -1,-0.1 1,-0.1 3,-0.1 0.277 28.8-120.7 -55.7 -1.3 -8.7 -1.3 2.2 16 16 A V > - 0 0 44 -2,-0.5 3,-2.1 -8,-0.5 -10,-0.1 0.356 33.6 -82.5 65.6 152.3 -8.4 2.5 3.1 17 17 A D T 3 S+ 0 0 114 -12,-0.3 3,-0.2 -13,-0.3 -1,-0.1 0.646 130.4 60.6 -61.0 -13.5 -7.6 5.3 0.4 18 18 A W T >> S+ 0 0 146 1,-0.1 4,-1.9 -3,-0.1 3,-1.0 0.433 74.6 128.6 -82.7 -6.2 -3.8 4.4 0.7 19 19 A G H <> + 0 0 16 -3,-2.1 4,-2.2 1,-0.2 -1,-0.1 0.661 68.8 33.4 -27.2 -73.4 -4.6 0.8 -0.5 20 20 A T H 3> S+ 0 0 128 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.817 117.6 54.3 -67.0 -30.3 -2.1 0.0 -3.4 21 21 A A H <> S+ 0 0 44 -3,-1.0 4,-2.6 2,-0.2 -1,-0.2 0.966 111.6 44.0 -65.6 -50.7 0.7 2.1 -2.0 22 22 A I H X S+ 0 0 84 -4,-1.9 4,-2.8 2,-0.2 -2,-0.2 0.863 112.1 56.5 -61.9 -34.6 0.6 0.2 1.4 23 23 A G H X S+ 0 0 43 -4,-2.2 4,-2.3 -5,-0.3 -2,-0.2 0.955 109.8 42.5 -57.0 -54.5 0.3 -3.0 -0.8 24 24 A N H X S+ 0 0 58 -4,-2.5 4,-2.4 2,-0.2 5,-0.2 0.901 115.2 51.7 -59.4 -44.2 3.6 -2.2 -2.7 25 25 A I H X S+ 0 0 48 -4,-2.6 4,-2.2 2,-0.2 -2,-0.2 0.953 112.2 44.3 -54.0 -58.1 5.3 -1.1 0.7 26 26 A G H X S+ 0 0 43 -4,-2.8 4,-1.9 2,-0.2 -2,-0.2 0.871 112.9 52.8 -61.3 -38.8 4.3 -4.4 2.5 27 27 A N H X S+ 0 0 109 -4,-2.3 4,-2.0 -5,-0.2 -2,-0.2 0.946 114.0 40.5 -59.4 -52.1 5.3 -6.5 -0.5 28 28 A N H X>S+ 0 0 39 -4,-2.4 4,-2.8 2,-0.2 5,-0.8 0.777 108.6 61.7 -76.1 -22.5 8.8 -5.0 -0.8 29 29 A A H X5S+ 0 0 42 -4,-2.2 4,-1.2 -5,-0.2 5,-0.2 0.956 110.9 40.2 -57.9 -50.5 9.2 -5.0 3.0 30 30 A A H <5S+ 0 0 93 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.893 122.8 42.0 -63.5 -41.3 8.9 -8.9 2.9 31 31 A A H <5S+ 0 0 76 -4,-2.0 -2,-0.2 -5,-0.1 -1,-0.2 0.870 133.0 7.9 -76.0 -40.7 11.1 -9.1 -0.3 32 32 A N H ><>S+ 0 0 35 -4,-2.8 3,-2.3 -5,-0.1 5,-1.1 0.583 93.4 93.9-128.3 -18.2 14.0 -6.7 0.4 33 33 A W G ><