==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RECEPTOR/OXIDOREDUCTASE COMPLEX 23-APR-99 1OM2 . COMPND 2 MOLECULE: PROTEIN (MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR Y.ABE,T.SHODAI,T.MUTO,K.MIHARA,H.TORII,S.NISHIKAWA,T.ENDO, . 106 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8285.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 65.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 53 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 306 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -93.9 2.2 0.3 -1.5 2 2 A A - 0 0 96 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.932 360.0 -82.7-160.4 175.0 3.6 3.9 -1.1 3 3 A G - 0 0 73 -2,-0.3 2,-0.3 1,-0.0 -1,-0.1 -0.007 33.6-135.2 -76.8-174.6 2.6 7.5 -0.9 4 4 A L + 0 0 146 4,-0.0 2,-0.3 2,-0.0 11,-0.0 -0.979 36.1 132.4-149.2 133.6 1.7 10.0 -3.7 5 5 A S - 0 0 76 -2,-0.3 2,-0.3 10,-0.0 14,-0.1 -0.935 54.2 -73.7-165.1 179.6 2.8 13.6 -4.2 6 6 A K S S- 0 0 116 -2,-0.3 10,-0.1 1,-0.2 9,-0.0 -0.670 106.3 -0.4 -89.2 143.5 4.2 16.1 -6.8 7 7 A L S S+ 0 0 83 -2,-0.3 -1,-0.2 8,-0.3 9,-0.1 0.894 74.1 169.9 41.5 62.6 7.9 15.9 -8.0 8 8 A P S S- 0 0 75 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.980 72.5 -45.0 -64.1 -60.7 8.8 12.9 -5.7 9 9 A D - 0 0 88 3,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.425 61.7-134.2-149.0 -20.1 12.2 12.1 -7.2 10 10 A L S S+ 0 0 89 2,-0.1 6,-0.1 1,-0.1 -3,-0.0 0.117 82.3 103.1 77.8 -18.0 11.9 12.2 -11.1 11 11 A K S S+ 0 0 159 4,-0.0 2,-0.3 2,-0.0 -1,-0.1 0.897 72.1 72.9 -57.8 -38.9 13.8 8.9 -11.5 12 12 A D S > S- 0 0 95 1,-0.1 4,-0.9 2,-0.0 -3,-0.1 -0.603 70.3-158.6 -79.8 135.2 10.4 7.3 -12.1 13 13 A A H > S+ 0 0 75 -2,-0.3 4,-2.7 2,-0.2 5,-0.2 0.842 91.1 59.4 -79.9 -38.3 8.8 8.2 -15.4 14 14 A E H > S+ 0 0 163 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.864 105.7 49.0 -59.0 -40.5 5.3 7.4 -14.2 15 15 A A H > S+ 0 0 23 2,-0.2 4,-2.7 1,-0.2 -8,-0.3 0.874 112.0 48.2 -66.8 -39.9 5.6 10.0 -11.4 16 16 A V H X S+ 0 0 31 -4,-0.9 4,-2.7 2,-0.2 -2,-0.2 0.879 113.2 48.5 -69.0 -38.9 6.8 12.6 -14.0 17 17 A Q H X S+ 0 0 56 -4,-2.7 4,-2.5 2,-0.2 -2,-0.2 0.913 112.0 49.3 -67.0 -43.8 3.9 11.7 -16.3 18 18 A K H X S+ 0 0 142 -4,-2.7 4,-2.5 1,-0.2 -2,-0.2 0.961 117.8 39.0 -59.9 -54.6 1.4 11.9 -13.4 19 19 A F H X S+ 0 0 17 -4,-2.7 4,-2.2 2,-0.2 5,-0.2 0.898 113.3 55.6 -61.3 -45.5 2.7 15.4 -12.3 20 20 A F H X S+ 0 0 11 -4,-2.7 4,-2.5 1,-0.2 -1,-0.2 0.937 113.9 41.6 -54.5 -48.7 3.2 16.6 -15.9 21 21 A L H X S+ 0 0 31 -4,-2.5 4,-2.9 2,-0.2 5,-0.3 0.876 109.5 57.8 -66.0 -40.8 -0.5 15.7 -16.6 22 22 A E H X S+ 0 0 95 -4,-2.5 4,-2.6 -5,-0.2 -1,-0.2 0.861 112.7 42.2 -57.6 -35.7 -1.6 17.2 -13.2 23 23 A E H X S+ 0 0 16 -4,-2.2 4,-3.1 2,-0.2 5,-0.2 0.912 111.3 53.2 -78.2 -45.4 0.0 20.5 -14.3 24 24 A I H X S+ 0 0 0 -4,-2.5 4,-2.2 -5,-0.2 -2,-0.2 0.934 119.9 36.2 -51.2 -50.7 -1.3 20.3 -17.9 25 25 A Q H X S+ 0 0 59 -4,-2.9 4,-2.9 2,-0.2 -2,-0.2 0.938 114.6 53.4 -71.3 -49.8 -4.8 19.8 -16.4 26 26 A L H X S+ 0 0 66 -4,-2.6 4,-2.7 -5,-0.3 5,-0.2 0.913 111.6 48.9 -51.9 -47.7 -4.4 22.1 -13.4 27 27 A G H X S+ 0 0 3 -4,-3.1 4,-2.8 2,-0.2 3,-0.4 0.980 110.8 47.3 -57.5 -63.4 -3.3 24.9 -15.8 28 28 A E H X S+ 0 0 37 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.876 115.0 49.3 -45.9 -42.3 -6.3 24.4 -18.3 29 29 A E H X S+ 0 0 80 -4,-2.9 4,-0.5 2,-0.2 -1,-0.2 0.883 109.5 49.3 -66.1 -41.3 -8.6 24.4 -15.2 30 30 A L H >X>S+ 0 0 37 -4,-2.7 5,-2.4 -3,-0.4 4,-2.1 0.913 112.0 49.4 -65.8 -39.0 -7.1 27.6 -13.7 31 31 A L H 3<5S+ 0 0 35 -4,-2.8 -2,-0.2 3,-0.3 -1,-0.2 0.851 99.6 65.1 -67.2 -31.0 -7.5 29.2 -17.1 32 32 A A H 3<5S+ 0 0 72 -4,-1.8 -1,-0.3 -5,-0.3 -2,-0.2 0.724 109.5 39.4 -60.3 -20.0 -11.1 27.9 -17.0 33 33 A Q H <<5S- 0 0 171 -3,-1.3 -2,-0.3 -4,-0.5 -1,-0.2 0.787 130.4-102.2 -92.5 -39.5 -11.3 30.4 -14.1 34 34 A G T <5S+ 0 0 26 -4,-2.1 2,-1.6 -5,-0.1 -3,-0.3 0.409 76.1 136.8 129.5 10.5 -9.2 32.9 -16.0 35 35 A D >>< + 0 0 66 -5,-2.4 4,-1.8 1,-0.2 3,-1.1 -0.289 15.0 155.0 -85.1 56.7 -5.6 32.7 -14.4 36 36 A Y H 3> + 0 0 114 -2,-1.6 4,-2.2 1,-0.3 -1,-0.2 0.812 69.6 60.6 -43.6 -43.6 -3.8 32.8 -17.8 37 37 A E H 3> S+ 0 0 102 -3,-0.3 4,-1.6 1,-0.2 -1,-0.3 0.892 107.1 44.3 -57.3 -43.7 -0.7 34.1 -16.1 38 38 A K H <> S+ 0 0 79 -3,-1.1 4,-3.1 1,-0.2 5,-0.3 0.844 108.4 59.1 -71.4 -33.3 -0.5 31.0 -13.9 39 39 A G H X S+ 0 0 3 -4,-1.8 4,-2.6 2,-0.2 5,-0.2 0.892 104.5 50.4 -61.5 -39.8 -1.2 28.9 -17.1 40 40 A V H X S+ 0 0 9 -4,-2.2 4,-2.7 2,-0.2 -2,-0.2 0.949 115.5 42.2 -61.6 -49.3 1.9 30.3 -18.7 41 41 A D H X S+ 0 0 66 -4,-1.6 4,-2.0 2,-0.2 -2,-0.2 0.938 117.1 46.1 -61.0 -53.0 4.0 29.5 -15.6 42 42 A H H X S+ 0 0 41 -4,-3.1 4,-2.3 2,-0.2 -1,-0.2 0.874 113.6 48.9 -61.9 -39.6 2.5 26.0 -15.0 43 43 A L H X S+ 0 0 18 -4,-2.6 4,-2.3 -5,-0.3 5,-0.2 0.960 108.4 53.8 -68.0 -43.9 2.8 25.2 -18.7 44 44 A T H X S+ 0 0 58 -4,-2.7 4,-1.5 1,-0.2 -2,-0.2 0.868 109.6 49.7 -52.9 -37.4 6.5 26.3 -18.6 45 45 A N H X S+ 0 0 61 -4,-2.0 4,-1.5 2,-0.2 -1,-0.2 0.908 104.2 56.8 -68.9 -41.6 6.9 23.9 -15.6 46 46 A A H >X S+ 0 0 0 -4,-2.3 4,-1.5 1,-0.3 3,-0.6 0.934 109.8 46.6 -55.5 -44.0 5.2 21.1 -17.7 47 47 A I H 3X S+ 0 0 35 -4,-2.3 4,-2.8 1,-0.2 -1,-0.3 0.848 105.2 61.2 -63.9 -35.4 8.0 21.8 -20.3 48 48 A A H 3< S+ 0 0 75 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.792 113.5 35.1 -64.2 -29.4 10.6 21.8 -17.4 49 49 A V H << S+ 0 0 34 -4,-1.5 -1,-0.2 -3,-0.6 -2,-0.2 0.631 120.9 48.3 -99.1 -17.8 9.7 18.2 -16.6 50 50 A C H < S- 0 0 53 -4,-1.5 -2,-0.2 -5,-0.2 -3,-0.2 0.921 77.4-161.9 -85.7 -51.0 9.1 17.1 -20.2 51 51 A G S < S+ 0 0 60 -4,-2.8 -3,-0.1 -5,-0.1 -4,-0.1 0.493 71.1 86.5 79.6 5.4 12.2 18.4 -21.9 52 52 A Q > + 0 0 107 -5,-0.1 4,-1.7 1,-0.1 3,-0.3 -0.604 47.7 161.6-131.9 65.6 10.4 18.1 -25.3 53 53 A P H > S+ 0 0 47 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.925 71.1 55.4 -52.8 -54.1 8.5 21.5 -25.6 54 54 A Q H > S+ 0 0 139 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.820 105.4 51.8 -52.9 -40.0 8.0 21.3 -29.3 55 55 A Q H > S+ 0 0 99 -3,-0.3 4,-2.1 1,-0.2 -1,-0.2 0.961 113.5 44.7 -62.5 -48.9 6.3 17.9 -29.2 56 56 A L H X S+ 0 0 4 -4,-1.7 4,-2.5 1,-0.2 -2,-0.2 0.880 109.3 56.3 -62.6 -38.5 3.9 19.2 -26.5 57 57 A L H X S+ 0 0 45 -4,-2.8 4,-2.1 2,-0.2 -1,-0.2 0.918 108.7 46.7 -62.1 -39.9 3.4 22.5 -28.5 58 58 A Q H X S+ 0 0 106 -4,-2.1 4,-1.4 2,-0.2 -1,-0.2 0.906 113.3 50.0 -65.1 -40.3 2.2 20.4 -31.5 59 59 A V H X S+ 0 0 2 -4,-2.1 4,-1.3 1,-0.2 -2,-0.2 0.834 112.7 46.4 -66.2 -33.7 0.0 18.4 -29.2 60 60 A L H X S+ 0 0 9 -4,-2.5 4,-1.1 2,-0.2 -1,-0.2 0.800 111.1 51.9 -78.9 -31.8 -1.4 21.6 -27.7 61 61 A Q H < S+ 0 0 138 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.769 116.1 40.2 -75.7 -27.0 -2.0 23.2 -31.1 62 62 A Q H < S+ 0 0 144 -4,-1.4 -2,-0.2 -5,-0.1 -1,-0.2 0.687 109.8 56.0 -94.7 -24.3 -3.9 20.1 -32.4 63 63 A T H < S- 0 0 33 -4,-1.3 -2,-0.1 1,-0.3 -3,-0.1 0.856 129.5 -21.2 -79.4 -33.5 -6.0 19.2 -29.3 64 64 A L S < S- 0 0 66 -4,-1.1 -1,-0.3 -5,-0.1 36,-0.0 -0.917 76.5 -90.1-169.0 147.6 -7.6 22.7 -29.1 65 65 A P - 0 0 115 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 -0.529 47.3-151.5 -64.7 112.5 -6.8 26.2 -30.4 66 66 A P > + 0 0 23 0, 0.0 4,-0.8 0, 0.0 -6,-0.0 -0.795 27.7 172.3 -95.8 106.1 -4.7 27.6 -27.4 67 67 A P H > S+ 0 0 99 0, 0.0 4,-1.0 0, 0.0 3,-0.4 0.877 84.2 58.3 -73.9 -36.3 -4.9 31.5 -27.0 68 68 A V H >> S+ 0 0 22 1,-0.2 4,-2.4 2,-0.2 3,-0.9 0.906 96.9 61.0 -56.6 -47.4 -2.9 31.1 -23.7 69 69 A F H 3> S+ 0 0 31 1,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.883 101.0 54.1 -46.2 -46.1 -0.1 29.5 -25.6 70 70 A Q H 3X S+ 0 0 108 -4,-0.8 4,-0.6 -3,-0.4 -1,-0.3 0.843 109.3 47.5 -59.6 -35.7 0.2 32.7 -27.6 71 71 A M H S+ 0 0 98 -2,-0.2 4,-1.3 3,-0.0 3,-0.1 0.594 74.9 52.6-126.5 -48.8 10.8 41.1 -23.3 79 79 A I H > S+ 0 0 128 1,-0.2 4,-1.8 2,-0.2 3,-0.4 0.910 103.7 60.4 -59.3 -46.1 13.4 42.9 -25.4 80 80 A S H > S+ 0 0 69 1,-0.3 4,-1.9 2,-0.2 3,-0.2 0.896 103.0 50.5 -48.6 -49.8 11.8 41.8 -28.6 81 81 A Q H > S+ 0 0 94 1,-0.2 4,-2.4 2,-0.2 -1,-0.3 0.857 107.0 55.3 -59.6 -37.2 8.6 43.7 -27.7 82 82 A R H < S+ 0 0 200 -4,-1.3 -1,-0.2 -3,-0.4 -2,-0.2 0.881 104.8 52.4 -64.8 -39.9 10.6 46.8 -26.9 83 83 A I H >X S+ 0 0 83 -4,-1.8 4,-3.1 -3,-0.2 3,-0.8 0.964 112.2 44.8 -60.5 -52.7 12.2 46.8 -30.5 84 84 A V H 3X S+ 0 0 68 -4,-1.9 6,-2.3 1,-0.3 2,-1.4 0.915 106.6 61.3 -55.8 -45.1 8.8 46.6 -32.1 85 85 A S H 3< S+ 0 0 85 -4,-2.4 -1,-0.3 4,-0.2 -2,-0.1 -0.158 123.0 19.3 -76.5 42.0 7.5 49.3 -29.7 86 86 A A H X4 S+ 0 0 68 -2,-1.4 3,-1.7 -3,-0.8 -2,-0.2 0.079 108.8 69.8-166.8 -61.3 10.1 51.8 -31.1 87 87 A Q H 3< S+ 0 0 157 -4,-3.1 -3,-0.2 1,-0.3 -2,-0.1 0.817 131.7 5.2 -37.8 -52.1 11.4 50.6 -34.6 88 88 A S T >< S- 0 0 36 -4,-1.0 3,-0.6 -5,-0.3 -1,-0.3 -0.186 111.0-105.2-128.4 30.1 8.0 51.4 -36.2 89 89 A L T < S- 0 0 140 -3,-1.7 2,-0.9 1,-0.3 -4,-0.2 0.801 80.1 -53.7 40.4 43.9 6.6 52.9 -33.0 90 90 A G T 3 S+ 0 0 35 -6,-2.3 -1,-0.3 -7,-0.2 2,-0.3 -0.481 129.1 5.0 96.1 -58.9 4.5 49.7 -32.5 91 91 A E < + 0 0 169 -2,-0.9 2,-0.3 -3,-0.6 -7,-0.0 -0.974 65.6 179.1-155.2 146.4 2.9 49.8 -36.0 92 92 A D - 0 0 110 -2,-0.3 2,-0.1 1,-0.0 -4,-0.0 -0.924 27.4-105.2-145.1 164.1 3.3 52.1 -39.2 93 93 A D - 0 0 129 -2,-0.3 2,-0.3 0, 0.0 -1,-0.0 -0.248 24.2-144.4 -87.3 176.9 1.9 52.3 -42.7 94 94 A V 0 0 135 1,-0.1 0, 0.0 -2,-0.1 0, 0.0 -0.979 360.0 360.0-143.1 148.6 3.4 51.3 -46.1 95 95 A E 0 0 259 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.462 360.0 360.0-137.9 360.0 3.1 52.8 -49.6 96 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 97 1 B G 0 0 103 0, 0.0 2,-2.4 0, 0.0 -68,-0.0 0.000 360.0 360.0 360.0 168.8 -14.0 21.0 -20.3 98 2 B P + 0 0 40 0, 0.0 -69,-0.2 0, 0.0 2,-0.2 -0.346 360.0 95.9 -74.1 58.7 -11.1 21.8 -17.9 99 3 B R + 0 0 151 -2,-2.4 -74,-0.1 -71,-0.1 -73,-0.1 -0.675 45.4 179.8-150.5 85.5 -9.3 18.4 -18.6 100 4 B L + 0 0 10 1,-0.2 2,-2.0 -2,-0.2 4,-0.5 0.460 55.8 107.7 -68.0 -1.9 -6.6 18.8 -21.2 101 5 B S + 0 0 46 1,-0.2 -1,-0.2 2,-0.1 -80,-0.0 -0.228 45.1 101.0 -76.8 51.8 -5.8 15.0 -20.8 102 6 B R S > S+ 0 0 199 -2,-2.0 3,-1.8 2,-0.1 -1,-0.2 0.873 88.7 32.1 -93.1 -69.3 -7.4 14.2 -24.2 103 7 B L G > S+ 0 0 22 -3,-0.5 3,-2.4 1,-0.3 -2,-0.1 0.824 108.6 72.0 -55.3 -36.8 -4.2 13.8 -26.3 104 8 B L G > S+ 0 0 4 -4,-0.5 3,-1.7 1,-0.3 -1,-0.3 0.653 75.8 79.0 -61.5 -14.2 -2.4 12.5 -23.2 105 9 B S G < S+ 0 0 111 -3,-1.8 -1,-0.3 1,-0.3 -2,-0.2 0.682 79.8 74.5 -63.5 -15.6 -4.4 9.2 -23.5 106 10 B Y G < 0 0 126 -3,-2.4 -1,-0.3 -4,-0.1 -2,-0.2 0.408 360.0 360.0 -73.8 -4.6 -1.7 8.5 -26.3 107 11 B A < 0 0 103 -3,-1.7 -2,-0.2 -4,-0.0 -3,-0.1 0.331 360.0 360.0-158.3 360.0 1.0 7.8 -23.6