==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 26-FEB-03 1OMQ . COMPND 2 MOLECULE: HOMEOTIC ANTENNAPEDIA PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.LINDBERG,H.BIVERSTAHL,A.GRASLUND,L.MALER . 16 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2509.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 7 43.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 31.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 43 A R 0 0 267 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -64.7 2.1 0.0 -1.2 2 44 A Q + 0 0 142 2,-0.1 0, 0.0 3,-0.1 0, 0.0 0.016 360.0 73.1-131.8 24.2 3.3 -3.6 -1.3 3 45 A I S > S+ 0 0 113 2,-0.1 4,-0.8 3,-0.1 -1,-0.0 0.555 95.6 49.5-111.0 -18.7 1.8 -4.8 2.0 4 46 A K T 4 S+ 0 0 179 2,-0.2 4,-0.3 1,-0.1 -2,-0.1 0.560 115.5 44.3 -94.9 -13.2 -1.8 -4.9 0.8 5 47 A I T 4 S+ 0 0 72 2,-0.1 -1,-0.1 3,-0.1 -2,-0.1 0.534 114.6 48.8-104.0 -13.9 -0.8 -6.9 -2.3 6 48 A W T > S+ 0 0 150 2,-0.2 4,-2.8 3,-0.1 5,-0.2 0.750 105.3 57.7 -93.7 -31.6 1.5 -9.2 -0.4 7 49 A F H X S+ 0 0 140 -4,-0.8 4,-0.6 1,-0.2 -2,-0.1 0.829 110.0 44.2 -66.9 -33.6 -1.0 -9.9 2.3 8 50 A Q H 4 S+ 0 0 121 -4,-0.3 -1,-0.2 2,-0.2 -2,-0.2 0.577 114.3 51.9 -85.7 -12.0 -3.5 -11.2 -0.3 9 51 A N H >4 S+ 0 0 83 -3,-0.2 3,-1.4 2,-0.1 -2,-0.2 0.839 107.1 49.4 -89.5 -40.7 -0.7 -13.1 -2.0 10 52 A R H >X S+ 0 0 172 -4,-2.8 3,-2.0 1,-0.3 4,-0.8 0.725 94.4 76.3 -70.0 -22.3 0.5 -14.9 1.2 11 53 A R H 3X S+ 0 0 202 -4,-0.6 4,-0.6 1,-0.3 -1,-0.3 0.692 88.1 60.8 -61.1 -18.4 -3.1 -15.8 1.8 12 54 A M H <4 S+ 0 0 135 -3,-1.4 -1,-0.3 1,-0.2 -2,-0.2 0.660 88.6 71.2 -81.9 -18.4 -2.5 -18.4 -1.0 13 55 A K H <4 S+ 0 0 131 -3,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.912 88.7 61.6 -62.8 -44.2 0.2 -20.0 1.1 14 56 A W H < S+ 0 0 229 -4,-0.8 -1,-0.2 2,-0.1 -2,-0.2 0.926 79.1 99.1 -46.1 -53.7 -2.4 -21.4 3.5 15 57 A K < 0 0 149 -4,-0.6 -3,-0.0 1,-0.2 0, 0.0 -0.130 360.0 360.0 -40.7 107.8 -3.9 -23.3 0.6 16 58 A K 0 0 224 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.162 360.0 360.0 -50.2 360.0 -2.3 -26.7 1.2