==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOLIPOPROTEIN 08-MAY-97 1OPP . COMPND 2 MOLECULE: APOLIPOPROTEIN C-I; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.ROZEK,G.W.BUCHKO,P.KANDA,R.J.CUSHLEY . 38 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4203.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 60.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 21.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 28.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A T 0 0 161 0, 0.0 3,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 151.8 -20.3 -8.7 -9.2 2 2 A P - 0 0 98 0, 0.0 2,-1.5 0, 0.0 5,-0.1 0.385 360.0 -34.7 -54.8-162.8 -19.8 -8.1 -5.4 3 3 A D > - 0 0 116 3,-0.1 2,-1.9 1,-0.1 3,-1.4 -0.499 65.0-157.8 -64.6 91.4 -22.3 -6.6 -3.0 4 4 A V T 3 S+ 0 0 115 -2,-1.5 -1,-0.1 -3,-0.2 0, 0.0 -0.527 80.0 49.1 -79.0 84.6 -23.8 -4.2 -5.4 5 5 A S T 3 S+ 0 0 104 -2,-1.9 -1,-0.2 0, 0.0 -2,-0.1 0.118 125.5 18.6 169.2 -31.1 -25.2 -1.7 -2.9 6 6 A S S < S+ 0 0 71 -3,-1.4 4,-0.3 2,-0.0 -2,-0.2 -0.108 88.7 108.0-150.2 44.1 -22.3 -1.0 -0.6 7 7 A A S > S+ 0 0 36 -4,-0.3 4,-0.5 2,-0.2 3,-0.4 0.726 75.1 58.2 -97.1 -26.2 -19.3 -2.2 -2.6 8 8 A L H >> S+ 0 0 114 1,-0.2 4,-0.7 2,-0.2 3,-0.6 0.772 91.5 75.2 -68.5 -28.7 -18.0 1.3 -3.3 9 9 A D H >4 S+ 0 0 118 1,-0.2 3,-1.2 2,-0.2 -1,-0.2 0.890 89.7 55.6 -49.3 -45.0 -17.8 1.8 0.5 10 10 A K H 3> S+ 0 0 148 -3,-0.4 4,-1.7 -4,-0.3 5,-0.3 0.857 98.1 61.4 -62.1 -36.4 -14.7 -0.4 0.7 11 11 A L H << S+ 0 0 92 -3,-0.6 2,-1.1 -4,-0.5 4,-0.4 0.664 88.3 73.5 -70.5 -17.4 -12.8 1.7 -1.8 12 12 A K T << S+ 0 0 163 -3,-1.2 -1,-0.3 -4,-0.7 -2,-0.1 -0.432 116.7 15.1 -87.0 60.0 -13.1 4.7 0.5 13 13 A E T >> S+ 0 0 115 -2,-1.1 4,-1.7 -3,-0.1 3,-0.7 -0.257 115.7 62.0 170.1 -80.7 -10.5 3.1 2.8 14 14 A F T 3< S+ 0 0 131 -4,-1.7 4,-0.3 1,-0.2 -3,-0.2 0.656 107.0 55.8 -43.0 -17.0 -8.6 0.2 1.2 15 15 A G T >> S+ 0 0 33 -4,-0.4 4,-1.3 -5,-0.3 3,-0.9 0.860 100.1 54.6 -86.7 -42.9 -7.4 3.0 -1.2 16 16 A N T <4 S+ 0 0 107 -3,-0.7 4,-0.3 1,-0.2 -2,-0.2 0.867 104.2 58.7 -50.0 -38.8 -6.0 5.2 1.5 17 17 A T T 3X S+ 0 0 54 -4,-1.7 4,-0.9 1,-0.2 -1,-0.2 0.738 101.8 52.2 -71.0 -25.5 -3.9 2.3 2.6 18 18 A L T <4 S+ 0 0 118 -3,-0.9 4,-0.4 -4,-0.3 -1,-0.2 0.797 100.3 60.2 -81.4 -32.6 -2.2 1.8 -0.7 19 19 A E T < S+ 0 0 129 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.539 114.5 38.4 -71.1 -7.5 -1.1 5.5 -1.0 20 20 A D T >>>S+ 0 0 56 -4,-0.3 4,-1.2 -3,-0.2 5,-0.8 0.537 112.2 56.4-110.9 -20.0 0.8 4.8 2.3 21 21 A K T 3<5S+ 0 0 129 -4,-0.9 -2,-0.2 1,-0.2 -3,-0.1 0.337 119.1 33.8 -89.3 3.1 1.9 1.3 1.3 22 22 A A T 345S+ 0 0 40 -4,-0.4 -1,-0.2 3,-0.1 -3,-0.1 -0.034 124.5 42.7-140.6 30.6 3.5 2.8 -1.8 23 23 A R T <45S+ 0 0 148 -3,-0.5 -3,-0.2 0, 0.0 4,-0.2 0.429 126.6 26.6-141.0 -41.0 4.6 6.1 -0.4 24 24 A E T >X5S+ 0 0 97 -4,-1.2 4,-0.7 2,-0.1 3,-0.6 0.711 122.6 55.7 -91.2 -30.9 6.0 5.2 3.0 25 25 A L H 3> S+ 0 0 104 1,-0.3 4,-1.4 2,-0.2 -1,-0.2 0.769 97.5 52.4 -67.0 -26.3 8.9 3.2 -1.1 27 27 A S H <> S+ 0 0 65 -3,-0.6 4,-0.9 2,-0.2 -1,-0.3 0.771 107.8 51.6 -75.4 -30.1 11.4 4.4 1.5 28 28 A R H < S+ 0 0 179 -4,-0.7 -2,-0.2 2,-0.2 -1,-0.2 0.712 109.4 51.8 -72.0 -21.5 11.5 0.8 2.7 29 29 A I H >< S+ 0 0 83 -4,-1.1 3,-0.8 1,-0.2 -2,-0.2 0.828 104.4 54.0 -85.9 -33.9 12.1 -0.3 -0.8 30 30 A K H >< S+ 0 0 144 -4,-1.4 3,-0.6 1,-0.3 -2,-0.2 0.821 103.6 57.6 -67.8 -32.5 15.0 2.1 -1.5 31 31 A Q T 3< S+ 0 0 162 -4,-0.9 -1,-0.3 1,-0.2 -2,-0.1 -0.068 107.9 47.2 -92.6 35.9 16.9 0.8 1.6 32 32 A S T < S+ 0 0 41 -3,-0.8 -1,-0.2 -2,-0.1 -2,-0.1 -0.033 74.1 100.7-170.3 41.7 16.9 -2.8 0.4 33 33 A E < + 0 0 172 -3,-0.6 -2,-0.1 1,-0.1 -3,-0.1 -0.003 66.9 72.9-126.7 29.2 18.0 -3.0 -3.2 34 34 A L S S- 0 0 102 -3,-0.0 -1,-0.1 0, 0.0 -3,-0.0 0.743 72.1-152.1-107.2 -37.2 21.7 -4.0 -2.8 35 35 A S S S+ 0 0 121 1,-0.0 -3,-0.0 0, 0.0 -2,-0.0 0.793 72.3 103.7 59.1 28.1 21.4 -7.6 -1.7 36 36 A A S S- 0 0 82 2,-0.0 -1,-0.0 0, 0.0 -4,-0.0 0.746 98.9 -4.4-104.6 -35.6 24.7 -7.0 0.0 37 37 A K 0 0 187 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.112 360.0 360.0-157.1 42.9 23.5 -6.7 3.6 38 38 A M 0 0 197 -6,-0.1 -5,-0.0 0, 0.0 -2,-0.0 0.994 360.0 360.0 -49.4 360.0 19.8 -6.9 3.7