==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 30-JAN-07 2OPV . COMPND 2 MOLECULE: KHSRP PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR I.DIAZ-MORENO,A.RAMOS,M.F.GARCIA-MAYORAL,D.HOLLINGWORTH . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5321.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 77.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 15.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 18 21.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 30.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A G 0 0 103 0, 0.0 2,-1.8 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 63.1 7.0 -9.8 0.9 2 6 A Q + 0 0 141 1,-0.2 3,-0.2 42,-0.1 66,-0.1 -0.612 360.0 178.9 -77.4 84.5 5.3 -12.3 3.1 3 7 A F S S+ 0 0 84 -2,-1.8 2,-1.7 1,-0.3 3,-0.4 0.843 75.8 63.9 -59.3 -34.9 1.9 -11.6 1.8 4 8 A H + 0 0 134 1,-0.2 -1,-0.3 -3,-0.2 -2,-0.0 -0.416 67.5 138.3 -85.3 60.9 0.5 -14.2 4.1 5 9 A D S S- 0 0 64 -2,-1.7 -1,-0.2 -3,-0.2 -2,-0.1 0.914 82.1 -36.7 -74.2 -45.1 1.6 -12.1 7.1 6 10 A N S S+ 0 0 107 -3,-0.4 2,-0.2 0, 0.0 -2,-0.1 0.352 131.9 14.8-141.3 -73.1 -1.5 -12.6 9.2 7 11 A A + 0 0 44 -4,-0.1 2,-2.3 2,-0.1 63,-0.1 -0.400 62.6 155.9-119.2 53.8 -4.9 -12.8 7.6 8 12 A N + 0 0 12 -2,-0.2 2,-1.2 61,-0.1 4,-0.1 -0.511 17.7 171.1 -76.9 72.1 -4.2 -13.4 3.9 9 13 A G - 0 0 71 -2,-2.3 2,-0.5 2,-0.1 -1,-0.1 -0.712 61.1 -14.4 -91.8 91.0 -7.6 -15.0 3.3 10 14 A G S S+ 0 0 63 -2,-1.2 2,-0.6 4,-0.0 -2,-0.1 -0.906 125.4 34.1 129.1-104.8 -7.9 -15.4 -0.5 11 15 A Q - 0 0 144 -2,-0.5 3,-0.2 1,-0.2 -2,-0.1 -0.815 57.7-157.2 -95.5 117.5 -5.5 -13.6 -2.8 12 16 A N S S+ 0 0 86 -2,-0.6 2,-1.0 1,-0.2 -1,-0.2 0.836 89.5 59.2 -59.0 -33.5 -2.0 -13.1 -1.4 13 17 A G S S+ 0 0 36 55,-0.1 2,-0.5 53,-0.1 -1,-0.2 -0.692 71.8 173.9-101.8 81.6 -1.6 -10.2 -3.7 14 18 A T E -A 67 0A 33 53,-2.9 53,-2.0 -2,-1.0 2,-0.5 -0.771 13.3-159.7 -89.0 127.9 -4.3 -7.7 -2.7 15 19 A V E -A 66 0A 73 -2,-0.5 2,-0.6 51,-0.2 51,-0.2 -0.936 7.3-166.2-113.1 127.2 -4.1 -4.4 -4.5 16 20 A Q E -A 65 0A 44 49,-2.2 49,-2.8 -2,-0.5 2,-0.6 -0.948 8.6-160.1-111.8 112.7 -5.7 -1.2 -3.2 17 21 A E E +A 64 0A 111 -2,-0.6 2,-0.3 47,-0.2 47,-0.2 -0.840 13.5 177.3 -98.5 119.3 -5.9 1.6 -5.8 18 22 A I E -A 63 0A 21 45,-2.7 45,-2.9 -2,-0.6 2,-0.6 -0.856 25.3-141.3-114.4 150.5 -6.4 5.1 -4.4 19 23 A M E -A 62 0A 97 -2,-0.3 41,-0.1 43,-0.2 -2,-0.0 -0.920 23.0-153.1-111.5 103.8 -6.6 8.4 -6.3 20 24 A I E -A 61 0A 0 41,-2.8 41,-2.2 -2,-0.6 5,-0.2 -0.647 21.8-110.0 -84.9 125.3 -4.8 11.0 -4.1 21 25 A P > - 0 0 50 0, 0.0 4,-1.3 0, 0.0 5,-0.1 -0.202 33.1-111.4 -50.2 139.1 -5.9 14.6 -4.5 22 26 A A T 4 S+ 0 0 51 1,-0.2 3,-0.2 2,-0.2 4,-0.1 0.852 111.0 21.6 -42.4 -57.2 -3.2 16.8 -6.2 23 27 A G T >4 S+ 0 0 72 1,-0.2 3,-1.2 2,-0.2 -1,-0.2 0.763 118.9 60.0 -90.2 -26.7 -2.2 18.9 -3.2 24 28 A K T >> S+ 0 0 64 1,-0.3 3,-1.5 2,-0.2 4,-0.8 0.542 83.5 85.5 -79.0 -4.6 -3.5 16.6 -0.4 25 29 A A H 3X S+ 0 0 3 -4,-1.3 4,-2.7 1,-0.3 5,-0.4 0.742 70.7 77.4 -63.6 -22.9 -1.1 14.1 -1.8 26 30 A G H <>>S+ 0 0 30 -3,-1.2 5,-3.0 1,-0.2 4,-1.8 0.775 92.5 52.0 -58.4 -25.7 1.5 15.8 0.5 27 31 A L H <45S+ 0 0 44 -3,-1.5 -1,-0.2 3,-0.2 -2,-0.2 0.917 111.3 43.3 -76.0 -45.8 -0.1 13.9 3.4 28 32 A V H <5S+ 0 0 0 -4,-0.8 -2,-0.2 1,-0.2 -1,-0.1 0.819 120.3 42.9 -72.0 -32.1 0.1 10.5 1.8 29 33 A I H <5S- 0 0 25 -4,-2.7 7,-2.6 6,-0.1 8,-0.3 0.887 114.2-121.1 -78.3 -42.2 3.6 11.1 0.6 30 34 A G T >X5 - 0 0 3 -4,-1.8 4,-1.9 -5,-0.4 3,-1.1 0.878 53.4 -62.1 101.3 51.5 4.6 12.8 3.8 31 35 A K T 34 S+ 0 0 14 -3,-1.1 4,-0.6 -7,-0.2 -3,-0.2 0.561 101.4 111.0 129.8 22.5 8.5 11.4 1.4 34 38 A E H X S+ 0 0 111 -4,-1.9 4,-1.7 2,-0.1 3,-0.4 0.933 81.1 45.6 -84.5 -54.1 8.8 10.7 5.1 35 39 A T H > S+ 0 0 34 -5,-0.3 4,-3.1 1,-0.2 -5,-0.3 0.896 108.6 57.2 -56.2 -44.6 5.3 9.4 5.8 36 40 A I H > S+ 0 0 22 -7,-2.6 4,-1.6 1,-0.2 -1,-0.2 0.873 106.2 50.0 -58.5 -37.8 5.3 7.1 2.8 37 41 A K H X S+ 0 0 110 -4,-0.6 4,-1.4 -3,-0.4 -1,-0.2 0.895 113.2 46.9 -66.2 -38.7 8.4 5.4 4.1 38 42 A Q H X S+ 0 0 98 -4,-1.7 4,-3.4 1,-0.2 5,-0.3 0.928 106.3 58.8 -66.1 -46.0 6.7 4.9 7.4 39 43 A L H X S+ 0 0 0 -4,-3.1 4,-1.5 1,-0.2 6,-0.4 0.881 106.0 47.2 -53.5 -46.7 3.5 3.7 5.9 40 44 A Q H X>S+ 0 0 43 -4,-1.6 5,-1.9 1,-0.2 4,-0.9 0.914 119.8 37.5 -64.5 -43.4 5.1 0.8 4.1 41 45 A E H <5S+ 0 0 159 -4,-1.4 -2,-0.2 3,-0.2 -1,-0.2 0.853 112.1 56.4 -81.1 -35.6 7.1 -0.4 7.2 42 46 A R H <5S+ 0 0 159 -4,-3.4 -1,-0.2 1,-0.2 -2,-0.2 0.856 120.5 29.6 -66.8 -35.3 4.5 0.3 9.9 43 47 A A H <5S- 0 0 18 -4,-1.5 -1,-0.2 -5,-0.3 -2,-0.2 0.571 106.1-121.6-100.6 -12.1 1.9 -1.9 8.2 44 48 A G T <5S+ 0 0 45 -4,-0.9 24,-0.3 1,-0.3 2,-0.2 0.875 74.7 111.8 71.7 37.9 4.2 -4.3 6.6 45 49 A V < - 0 0 13 -5,-1.9 2,-0.5 -6,-0.4 -1,-0.3 -0.707 67.8-111.9-129.1 178.6 2.9 -3.5 3.1 46 50 A K E -B 66 0A 112 20,-1.7 20,-3.1 -2,-0.2 2,-0.6 -0.982 24.0-172.3-120.7 124.7 4.0 -1.8 -0.1 47 51 A M E -B 65 0A 3 -2,-0.5 2,-0.9 18,-0.2 18,-0.2 -0.959 7.3-160.6-113.9 115.6 2.5 1.4 -1.2 48 52 A I E -B 64 0A 67 16,-2.5 16,-1.7 -2,-0.6 2,-0.9 -0.843 4.1-165.4 -99.3 104.8 3.5 2.6 -4.7 49 53 A L E -B 63 0A 15 -2,-0.9 2,-1.9 14,-0.2 3,-0.3 -0.807 14.5-145.3 -87.5 104.4 2.8 6.3 -5.0 50 54 A I + 0 0 44 12,-2.5 4,-0.1 -2,-0.9 -2,-0.0 -0.535 48.9 139.9 -72.7 86.6 2.9 7.1 -8.7 51 55 A Q S S+ 0 0 80 -2,-1.9 -1,-0.2 10,-0.1 3,-0.2 0.638 74.0 38.9 -99.7 -23.3 4.4 10.6 -8.2 52 56 A D S S+ 0 0 146 -3,-0.3 -2,-0.1 1,-0.1 -1,-0.1 0.279 85.0 97.3-114.7 6.1 6.8 10.4 -11.1 53 57 A G S S- 0 0 43 1,-0.1 -1,-0.1 9,-0.1 -2,-0.1 0.754 73.8-160.6 -66.3 -22.7 4.6 8.5 -13.5 54 58 A S + 0 0 59 -3,-0.2 2,-2.9 1,-0.1 -1,-0.1 -0.080 61.0 78.0 65.4-172.6 3.7 11.9 -15.1 55 59 A Q S S+ 0 0 187 1,-0.2 3,-0.4 -3,-0.1 -1,-0.1 -0.362 112.4 36.2 71.8 -62.3 0.6 12.6 -17.2 56 60 A N S > S+ 0 0 34 -2,-2.9 3,-2.0 1,-0.2 -1,-0.2 0.208 86.7 107.6-100.6 12.5 -1.5 12.8 -14.1 57 61 A T T 3 S+ 0 0 47 1,-0.3 -1,-0.2 4,-0.1 4,-0.0 0.816 79.1 52.2 -60.2 -29.8 1.3 14.4 -12.1 58 62 A N T 3 S+ 0 0 141 -3,-0.4 -1,-0.3 2,-0.0 2,-0.1 0.499 121.4 29.0 -82.7 -4.3 -0.7 17.7 -12.2 59 63 A V S < S- 0 0 68 -3,-2.0 -3,-0.1 1,-0.3 -39,-0.1 -0.342 109.9 -14.8-131.8-153.4 -3.7 15.9 -10.9 60 64 A D - 0 0 73 -2,-0.1 -1,-0.3 1,-0.1 -2,-0.0 -0.136 65.8-123.3 -53.6 151.6 -4.9 12.9 -8.7 61 65 A K E -A 20 0A 19 -41,-2.2 -41,-2.8 -3,-0.1 2,-0.7 -0.876 10.0-127.8-110.8 131.4 -2.2 10.3 -7.8 62 66 A P E -A 19 0A 19 0, 0.0 -12,-2.5 0, 0.0 2,-0.5 -0.654 30.0-175.3 -75.3 111.4 -2.4 6.6 -8.5 63 67 A L E -AB 18 49A 0 -45,-2.9 -45,-2.7 -2,-0.7 2,-0.6 -0.954 7.9-170.4-112.4 120.7 -1.7 4.7 -5.3 64 68 A R E -AB 17 48A 108 -16,-1.7 -16,-2.5 -2,-0.5 2,-0.7 -0.939 5.2-163.9-111.5 111.7 -1.4 0.9 -5.3 65 69 A I E -AB 16 47A 0 -49,-2.8 -49,-2.2 -2,-0.6 2,-0.5 -0.858 18.0-170.1 -91.3 112.1 -1.3 -0.7 -1.9 66 70 A I E +AB 15 46A 51 -20,-3.1 -20,-1.7 -2,-0.7 2,-0.3 -0.899 34.8 44.3-113.9 129.4 -0.1 -4.2 -2.5 67 71 A G E S+A 14 0A 5 -53,-2.0 -53,-2.9 -2,-0.5 -64,-0.1 -0.999 86.0 19.4 153.4-140.9 0.1 -7.1 -0.1 68 72 A D > - 0 0 3 -2,-0.3 4,-3.3 -24,-0.3 5,-0.3 -0.478 61.5-132.7 -72.0 130.9 -2.0 -8.9 2.6 69 73 A P H > S+ 0 0 31 0, 0.0 4,-1.2 0, 0.0 -1,-0.1 0.727 103.7 52.2 -58.0 -26.5 -5.8 -8.1 2.4 70 74 A Y H > S+ 0 0 117 2,-0.2 4,-1.7 1,-0.1 5,-0.1 0.931 118.0 33.3 -79.1 -47.6 -6.0 -7.4 6.1 71 75 A K H > S+ 0 0 26 -3,-0.2 4,-2.9 2,-0.2 5,-0.2 0.778 112.9 62.6 -80.5 -26.6 -3.2 -4.9 6.3 72 76 A V H X S+ 0 0 0 -4,-3.3 4,-2.0 2,-0.2 -1,-0.2 0.909 108.9 42.6 -60.7 -40.1 -3.9 -3.6 2.8 73 77 A Q H X S+ 0 0 69 -4,-1.2 4,-3.4 -5,-0.3 5,-0.3 0.908 114.7 48.8 -74.0 -41.2 -7.3 -2.5 4.1 74 78 A Q H X S+ 0 0 95 -4,-1.7 4,-1.0 1,-0.2 -2,-0.2 0.894 115.0 45.9 -63.1 -39.1 -6.0 -1.2 7.4 75 79 A A H X S+ 0 0 0 -4,-2.9 4,-2.5 2,-0.2 5,-0.3 0.846 113.2 50.5 -71.7 -35.3 -3.4 0.7 5.4 76 80 A C H X S+ 0 0 3 -4,-2.0 4,-3.2 2,-0.2 5,-0.3 0.969 113.7 42.9 -63.5 -54.1 -6.0 1.9 2.9 77 81 A E H X S+ 0 0 112 -4,-3.4 4,-0.9 1,-0.2 -1,-0.2 0.724 112.8 59.0 -65.2 -20.7 -8.3 3.1 5.7 78 82 A M H X S+ 0 0 37 -4,-1.0 4,-1.3 -5,-0.3 -2,-0.2 0.968 115.5 29.2 -69.5 -56.0 -5.1 4.5 7.2 79 83 A V H X S+ 0 0 0 -4,-2.5 4,-1.4 1,-0.2 -2,-0.2 0.806 119.1 56.2 -79.4 -29.6 -4.1 6.8 4.3 80 84 A M H X S+ 0 0 83 -4,-3.2 4,-1.0 -5,-0.3 -1,-0.2 0.811 102.8 57.5 -71.5 -28.9 -7.7 7.3 3.2 81 85 A D H >< S+ 0 0 105 -4,-0.9 3,-0.8 -5,-0.3 4,-0.3 0.946 106.8 47.1 -62.6 -47.9 -8.4 8.6 6.7 82 86 A I H >< S+ 0 0 41 -4,-1.3 3,-0.5 1,-0.3 -2,-0.2 0.829 111.4 53.1 -60.2 -32.5 -5.8 11.2 6.3 83 87 A L H 3< S+ 0 0 18 -4,-1.4 -1,-0.3 1,-0.2 -2,-0.2 0.663 111.8 43.3 -81.8 -17.5 -7.3 12.0 2.9 84 88 A R T << 0 0 209 -4,-1.0 -1,-0.2 -3,-0.8 -2,-0.2 0.292 360.0 360.0-102.9 5.9 -10.7 12.5 4.5 85 89 A E < 0 0 171 -3,-0.5 -1,-0.1 -4,-0.3 -4,-0.0 -0.856 360.0 360.0-102.6 360.0 -9.1 14.4 7.3