==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 31-JAN-07 2OQK . COMPND 2 MOLECULE: PUTATIVE TRANSLATION INITIATION FACTOR EIF-1A; . SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM IOWA II; . AUTHOR A.DONG,J.LEW,Y.ZHAO,A.HASSANALI,L.LIN,W.QIU,S.J.BROKX,G.WASN . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6094.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 67.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 29.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 11.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 22 A D 0 0 216 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-166.3 -5.9 10.0 27.1 2 23 A K - 0 0 191 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.335 360.0-102.7 -70.7 144.0 -3.6 10.4 24.0 3 24 A R - 0 0 134 1,-0.1 -1,-0.1 -2,-0.1 2,-0.0 -0.280 47.0 -91.7 -62.2 149.1 -0.4 12.5 24.2 4 25 A E - 0 0 84 1,-0.1 2,-0.6 0, 0.0 -1,-0.1 -0.379 43.0-110.3 -63.2 140.0 -0.6 16.0 22.7 5 26 A L - 0 0 33 -3,-0.1 2,-0.5 -2,-0.0 -1,-0.1 -0.657 31.5-139.0 -75.1 119.4 0.4 16.1 19.0 6 27 A V - 0 0 64 -2,-0.6 2,-0.2 -3,-0.0 -1,-0.0 -0.704 16.3-160.1 -85.1 120.8 3.7 17.9 18.7 7 28 A F - 0 0 85 -2,-0.5 50,-0.0 1,-0.1 2,-0.0 -0.603 29.3 -93.8 -92.6 158.5 4.1 20.3 15.8 8 29 A K - 0 0 86 -2,-0.2 2,-0.2 4,-0.0 -1,-0.1 -0.370 42.0-168.5 -68.6 151.2 7.4 21.6 14.4 9 30 A E > - 0 0 141 1,-0.2 3,-1.4 4,-0.0 -1,-0.0 -0.676 44.1 -43.7-126.5-174.9 8.7 24.9 15.7 10 31 A E T 3 S+ 0 0 131 1,-0.3 -1,-0.2 -2,-0.2 3,-0.1 -0.215 128.0 18.9 -55.7 137.2 11.5 27.1 14.5 11 32 A G T 3 S+ 0 0 40 1,-0.3 49,-2.8 48,-0.1 2,-0.3 0.644 108.8 96.0 78.4 14.7 14.7 25.2 13.6 12 33 A Q E < -A 59 0A 35 -3,-1.4 2,-0.3 47,-0.2 -1,-0.3 -0.956 49.0-172.8-132.9 154.1 12.9 21.9 13.2 13 34 A E E -A 58 0A 41 45,-2.1 45,-2.9 -2,-0.3 2,-0.2 -0.972 28.0-111.7-141.4 151.8 11.4 20.1 10.1 14 35 A Y E +A 57 0A 2 -2,-0.3 17,-2.4 43,-0.2 2,-0.3 -0.580 42.1 179.9 -77.1 149.6 9.3 17.0 9.6 15 36 A G E -AB 56 30A 0 41,-2.4 41,-2.7 15,-0.3 2,-0.4 -0.976 27.2-135.4-145.3 167.8 11.1 14.1 7.9 16 37 A Q E -AB 55 29A 28 13,-2.3 13,-2.6 -2,-0.3 39,-0.2 -0.988 33.4-115.5-126.7 125.5 10.6 10.6 6.7 17 38 A V E + B 0 28A 2 37,-2.7 36,-3.3 -2,-0.4 11,-0.3 -0.432 30.7 179.5 -65.6 128.1 13.2 8.0 7.5 18 39 A Q E - 0 0 78 9,-3.3 2,-0.3 1,-0.4 10,-0.2 0.835 62.9 -19.2 -95.4 -46.5 14.9 6.6 4.3 19 40 A R E - B 0 27A 124 8,-1.3 8,-2.5 32,-0.1 -1,-0.4 -0.987 58.6-112.9-161.0 153.4 17.4 4.1 5.8 20 41 A X E - B 0 26A 78 -2,-0.3 6,-0.3 6,-0.2 31,-0.0 -0.732 23.6-175.8 -85.1 137.7 19.2 3.2 9.0 21 42 A L E - 0 0 84 4,-2.8 5,-0.2 -2,-0.4 -1,-0.1 0.556 31.4-132.0-112.0 -9.7 23.0 3.7 8.9 22 43 A G E > S+ B 0 25A 41 3,-1.1 3,-0.7 1,-0.1 -1,-0.1 -0.110 82.6 87.0 75.1 176.6 24.1 2.3 12.3 23 44 A N T 3 S- 0 0 90 1,-0.2 17,-0.1 16,-0.0 3,-0.1 0.859 131.1 -65.3 54.3 34.2 26.4 4.1 14.7 24 45 A G T 3 S+ 0 0 18 1,-0.2 16,-3.0 15,-0.1 2,-0.3 0.810 109.2 120.2 57.6 39.3 23.0 5.6 15.8 25 46 A R E < -BC 22 39A 120 -3,-0.7 -4,-2.8 14,-0.2 -3,-1.1 -0.903 36.4-177.6-127.2 159.2 22.4 7.5 12.5 26 47 A L E -BC 20 38A 0 12,-1.7 12,-3.1 -2,-0.3 2,-0.5 -0.981 27.8-120.0-145.5 158.6 19.7 7.5 9.8 27 48 A D E -BC 19 37A 39 -8,-2.5 -9,-3.3 -2,-0.3 -8,-1.3 -0.874 34.3-172.4 -95.4 129.2 19.1 9.3 6.5 28 49 A A E -BC 17 36A 1 8,-2.5 8,-2.7 -2,-0.5 2,-0.7 -0.981 23.9-140.6-122.7 136.6 15.9 11.3 6.5 29 50 A Y E -BC 16 35A 94 -13,-2.6 -13,-2.3 -2,-0.4 2,-0.3 -0.882 29.1-152.9 -87.1 117.5 14.1 13.1 3.7 30 51 A C E > -B 15 0A 0 4,-2.5 3,-1.9 -2,-0.7 4,-0.4 -0.698 19.9-122.0 -97.3 147.3 12.9 16.3 5.3 31 52 A F T 3 S+ 0 0 54 -17,-2.4 -16,-0.1 1,-0.3 -1,-0.1 0.397 107.2 72.1 -76.3 4.3 9.8 18.1 3.9 32 53 A D T 3 S- 0 0 73 -18,-0.3 -1,-0.3 2,-0.2 3,-0.1 0.254 123.7-101.3 -86.8 7.1 11.8 21.3 3.3 33 54 A G S < S+ 0 0 47 -3,-1.9 2,-0.5 1,-0.2 -2,-0.2 0.581 85.0 123.1 89.2 11.6 13.3 19.3 0.5 34 55 A Q - 0 0 62 -4,-0.4 -4,-2.5 2,-0.0 2,-0.4 -0.906 55.2-140.9-114.9 129.0 16.6 18.5 2.3 35 56 A K E -C 29 0A 110 -2,-0.5 2,-0.4 -6,-0.2 -6,-0.2 -0.717 27.6-168.5 -76.9 133.9 18.1 15.1 3.0 36 57 A R E -C 28 0A 3 -8,-2.7 -8,-2.5 -2,-0.4 2,-0.7 -0.993 24.9-138.1-133.2 135.7 19.7 15.1 6.4 37 58 A L E -Cd 27 67A 47 29,-2.7 31,-1.7 -2,-0.4 2,-0.4 -0.849 39.2-159.5 -89.4 113.1 22.0 12.6 8.1 38 59 A C E -Cd 26 68A 0 -12,-3.1 -12,-1.7 -2,-0.7 2,-0.3 -0.831 18.7-132.4-113.9 133.6 20.5 12.5 11.6 39 60 A H E -Cd 25 69A 79 29,-2.3 31,-2.6 -2,-0.4 2,-0.5 -0.610 21.1-145.6 -73.1 132.6 21.8 11.4 15.1 40 61 A I - 0 0 7 -16,-3.0 2,-0.1 -2,-0.3 31,-0.1 -0.910 18.7-124.8-101.6 127.9 19.4 9.2 17.0 41 62 A R > - 0 0 110 -2,-0.5 4,-2.1 29,-0.5 3,-0.5 -0.433 13.1-124.9 -77.1 141.8 19.4 9.7 20.8 42 63 A G H > S+ 0 0 48 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.837 108.0 55.2 -52.8 -41.7 20.1 6.8 23.1 43 64 A K H > S+ 0 0 127 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.888 109.9 46.7 -61.9 -42.6 16.9 7.2 25.1 44 65 A X H > S+ 0 0 11 -3,-0.5 4,-2.6 2,-0.2 3,-0.4 0.937 108.2 54.7 -63.2 -51.3 14.8 7.0 22.0 45 66 A R H < S+ 0 0 98 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.843 108.4 51.2 -49.5 -41.2 16.6 3.9 20.6 46 67 A K H < S+ 0 0 113 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.865 117.5 35.7 -67.7 -38.6 15.9 2.1 23.9 47 68 A K H < S+ 0 0 129 -4,-1.4 2,-0.3 -3,-0.4 -2,-0.2 0.769 119.5 28.5 -90.7 -28.3 12.1 2.8 23.9 48 69 A V S < S- 0 0 40 -4,-2.6 2,-0.4 -5,-0.1 -1,-0.1 -0.920 70.1-117.5-135.4 156.0 11.0 2.7 20.3 49 70 A W - 0 0 213 -2,-0.3 2,-0.5 -3,-0.0 -3,-0.1 -0.798 25.3-160.8 -87.1 135.4 11.9 1.1 16.9 50 71 A V + 0 0 13 -2,-0.4 3,-0.0 -5,-0.1 6,-0.0 -0.988 23.0 163.6-117.8 124.4 12.9 3.6 14.3 51 72 A N > - 0 0 79 -2,-0.5 3,-2.2 1,-0.1 -34,-0.3 -0.895 45.0 -69.8-136.1 160.3 12.6 2.2 10.7 52 73 A P T 3 S+ 0 0 76 0, 0.0 -34,-0.2 0, 0.0 3,-0.1 -0.223 119.2 28.2 -51.0 138.2 12.4 3.3 7.1 53 74 A G T 3 S+ 0 0 30 -36,-3.3 -35,-0.1 1,-0.3 -34,-0.0 0.071 88.4 132.5 90.3 -20.9 9.2 5.1 6.3 54 75 A D < - 0 0 37 -3,-2.2 -37,-2.7 40,-0.1 2,-0.4 -0.285 57.0-125.2 -60.9 145.7 8.7 6.4 9.9 55 76 A I E +A 16 0A 5 19,-0.4 19,-2.9 -39,-0.2 2,-0.3 -0.837 36.1 178.7 -94.8 132.6 7.8 10.1 10.4 56 77 A V E -AE 15 73A 0 -41,-2.7 -41,-2.4 -2,-0.4 2,-0.5 -0.895 32.7-123.6-132.8 155.9 10.1 12.0 12.6 57 78 A L E -AE 14 72A 3 15,-2.6 14,-2.7 -2,-0.3 15,-1.1 -0.942 33.7-157.6-101.5 126.7 10.7 15.5 14.0 58 79 A V E -AE 13 70A 0 -45,-2.9 -45,-2.1 -2,-0.5 2,-0.5 -0.907 10.6-145.8-112.5 126.8 14.2 16.7 13.1 59 80 A S E -AE 12 69A 34 10,-3.4 10,-1.8 -2,-0.5 -47,-0.2 -0.835 27.0-132.6 -88.7 124.2 16.1 19.4 14.9 60 81 A L E - E 0 68A 41 -49,-2.8 2,-0.5 -2,-0.5 8,-0.2 -0.260 4.7-133.2 -72.5 160.8 18.3 21.3 12.4 61 82 A R > - 0 0 66 6,-0.7 3,-0.6 3,-0.3 6,-0.2 -0.977 9.0-147.4-116.0 116.3 22.0 22.2 12.8 62 83 A D T 3 S+ 0 0 161 -2,-0.5 3,-0.2 1,-0.2 -1,-0.1 0.819 96.9 36.9 -51.2 -37.1 22.8 25.9 12.0 63 84 A F T 3 S+ 0 0 207 1,-0.2 2,-0.3 2,-0.0 -1,-0.2 0.633 121.9 42.0 -95.9 -14.7 26.3 25.1 10.7 64 85 A Q X + 0 0 84 -3,-0.6 3,-2.0 1,-0.1 -3,-0.3 -0.712 57.5 175.1-132.8 87.6 25.7 21.8 9.0 65 86 A D T 3 S+ 0 0 80 -2,-0.3 -1,-0.1 1,-0.3 -3,-0.1 0.677 80.5 64.6 -64.2 -20.8 22.4 21.7 7.0 66 87 A S T 3 S+ 0 0 63 -30,-0.1 -29,-2.7 -6,-0.0 -1,-0.3 0.435 104.2 60.8 -78.6 -1.0 23.2 18.2 5.7 67 88 A K E < +d 37 0A 62 -3,-2.0 -6,-0.7 -31,-0.3 2,-0.3 -0.799 58.7 157.6-125.3 164.4 22.9 17.0 9.3 68 89 A G E -dE 38 60A 0 -31,-1.7 -29,-2.3 -2,-0.3 2,-0.4 -0.963 32.8-110.6-168.1-177.5 20.3 16.9 12.1 69 90 A D E -dE 39 59A 27 -10,-1.8 -10,-3.4 -2,-0.3 2,-0.6 -1.000 26.3-127.3-132.7 131.4 19.1 15.4 15.3 70 91 A I E + E 0 58A 0 -31,-2.6 -29,-0.5 -2,-0.4 -12,-0.2 -0.686 27.4 175.4 -79.7 117.7 15.9 13.2 15.8 71 92 A I E - 0 0 47 -14,-2.7 2,-0.3 -2,-0.6 -1,-0.2 0.902 63.3 -7.9 -83.5 -50.6 13.9 14.7 18.6 72 93 A L E - E 0 57A 34 -15,-1.1 -15,-2.6 -28,-0.0 2,-0.5 -0.953 53.7-132.3-149.2 159.1 10.9 12.4 18.3 73 94 A K E - E 0 56A 47 -2,-0.3 2,-0.3 -17,-0.2 -17,-0.2 -0.962 27.8-134.6-112.2 132.6 9.2 9.7 16.3 74 95 A Y - 0 0 5 -19,-2.9 -19,-0.4 -2,-0.5 -69,-0.0 -0.656 17.7-123.0 -84.8 141.3 5.5 10.0 15.4 75 96 A T > - 0 0 55 -2,-0.3 4,-3.1 1,-0.1 5,-0.2 -0.385 32.9-104.1 -70.7 161.1 3.1 7.0 15.9 76 97 A P H > S+ 0 0 72 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.926 124.4 49.9 -52.1 -46.4 1.2 6.0 12.8 77 98 A D H > S+ 0 0 117 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.909 111.7 47.6 -59.0 -44.2 -1.9 7.6 14.2 78 99 A E H > S+ 0 0 21 2,-0.2 4,-3.0 1,-0.2 -1,-0.2 0.911 109.4 53.4 -63.4 -42.5 -0.0 10.8 14.9 79 100 A A H X S+ 0 0 2 -4,-3.1 4,-2.1 2,-0.2 -2,-0.2 0.929 109.5 48.1 -58.1 -44.2 1.5 10.8 11.4 80 101 A R H X S+ 0 0 121 -4,-2.5 4,-3.1 -5,-0.2 -1,-0.2 0.882 109.6 53.8 -63.9 -35.2 -2.0 10.5 9.9 81 102 A A H X S+ 0 0 30 -4,-2.0 4,-2.7 2,-0.2 6,-0.2 0.943 107.0 51.3 -62.5 -46.5 -3.1 13.4 12.2 82 103 A L H <>S+ 0 0 0 -4,-3.0 5,-2.3 1,-0.2 6,-0.7 0.921 113.2 45.6 -52.1 -45.4 -0.2 15.5 10.8 83 104 A K H ><5S+ 0 0 45 -4,-2.1 3,-1.6 2,-0.2 -2,-0.2 0.926 111.2 50.6 -66.8 -44.8 -1.4 14.6 7.3 84 105 A S H 3<5S+ 0 0 108 -4,-3.1 -1,-0.2 1,-0.3 -2,-0.2 0.893 111.4 50.7 -62.2 -35.9 -5.1 15.3 8.0 85 106 A K T 3<5S- 0 0 124 -4,-2.7 -1,-0.3 -5,-0.2 -2,-0.2 0.427 117.2-113.5 -81.8 1.1 -4.0 18.7 9.5 86 107 A G T < 5S+ 0 0 63 -3,-1.6 -3,-0.2 -4,-0.2 -2,-0.1 0.562 82.0 122.4 80.7 10.8 -1.9 19.6 6.4 87 108 A E S - 0 0 59 0, 0.0 3,-2.0 0, 0.0 -2,-0.1 -0.248 33.0-126.7 -64.0 148.0 1.8 16.1 2.2 90 111 A E T 3 S+ 0 0 156 1,-0.3 -7,-0.1 -7,-0.1 -6,-0.0 0.782 109.4 56.5 -58.7 -28.4 -1.4 14.1 1.6 91 112 A T T 3 S+ 0 0 136 2,-0.1 -1,-0.3 -8,-0.0 2,-0.1 0.392 75.4 128.3 -86.4 2.8 0.5 11.6 -0.5 92 113 A T < - 0 0 10 -3,-2.0 2,-0.7 1,-0.1 -4,-0.0 -0.436 63.4-125.2 -64.0 132.5 3.0 10.7 2.2 93 114 A K 0 0 173 -2,-0.1 -1,-0.1 1,-0.0 -2,-0.1 -0.726 360.0 360.0 -80.7 116.1 3.2 7.0 2.7 94 115 A I 0 0 72 -2,-0.7 -40,-0.1 -40,-0.0 -41,-0.0 -0.814 360.0 360.0 -94.4 360.0 2.5 6.2 6.3