==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 01-FEB-07 2OQQ . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR HY5; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR M.-K.YOON,H.M.KIM,G.CHOI,J.-O.LEE,B.-S.CHOI . 84 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6333.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 90.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 73 86.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 73 0, 0.0 4,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-166.5 23.8 29.0 0.9 2 2 A S > + 0 0 102 2,-0.1 4,-1.2 3,-0.1 5,-0.2 0.829 360.0 39.5 -92.4 -49.2 26.8 28.0 3.1 3 3 A A H > S+ 0 0 75 2,-0.2 4,-1.1 1,-0.2 3,-0.2 0.913 123.3 42.8 -62.5 -45.5 25.4 29.7 6.2 4 4 A Y H 4 S+ 0 0 97 1,-0.2 4,-0.5 2,-0.2 -1,-0.2 0.916 113.3 51.6 -67.0 -46.6 21.9 28.5 5.3 5 5 A L H > S+ 0 0 62 -4,-0.4 4,-0.6 1,-0.2 -1,-0.2 0.623 109.8 48.8 -68.2 -17.9 23.1 25.0 4.3 6 6 A S H X S+ 0 0 67 -4,-1.2 4,-1.3 -3,-0.2 -1,-0.2 0.740 107.8 57.0 -90.6 -25.8 25.0 24.4 7.5 7 7 A E H < S+ 0 0 88 -4,-1.1 4,-0.5 -5,-0.2 -2,-0.2 0.489 105.0 49.9 -82.2 -7.2 22.0 25.6 9.5 8 8 A L H > S+ 0 0 7 -4,-0.5 4,-1.3 2,-0.2 -1,-0.2 0.765 112.3 44.5-100.0 -34.0 19.6 23.0 8.0 9 9 A E H X S+ 0 0 64 -4,-0.6 4,-2.0 2,-0.2 -2,-0.2 0.818 116.0 49.9 -76.4 -31.5 21.8 20.0 8.6 10 10 A N H X S+ 0 0 91 -4,-1.3 4,-2.6 2,-0.2 5,-0.2 0.883 110.1 49.5 -71.4 -38.7 22.5 21.4 12.1 11 11 A R H > S+ 0 0 98 -4,-0.5 4,-1.9 1,-0.2 -2,-0.2 0.793 110.2 51.9 -71.1 -28.8 18.8 21.9 12.7 12 12 A V H X S+ 0 0 4 -4,-1.3 4,-2.2 2,-0.2 -2,-0.2 0.896 110.4 48.3 -72.9 -42.6 18.3 18.3 11.5 13 13 A K H X S+ 0 0 138 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.954 114.4 44.2 -62.4 -51.5 20.9 17.0 14.0 14 14 A D H X S+ 0 0 104 -4,-2.6 4,-3.0 1,-0.2 5,-0.2 0.905 113.5 51.0 -61.2 -42.6 19.4 18.9 16.9 15 15 A L H X S+ 0 0 20 -4,-1.9 4,-2.8 1,-0.2 -1,-0.2 0.887 110.9 49.7 -61.9 -39.3 15.9 17.9 16.0 16 16 A E H X S+ 0 0 70 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.931 113.1 45.5 -65.0 -47.3 17.0 14.3 15.8 17 17 A N H X S+ 0 0 107 -4,-2.6 4,-2.0 2,-0.2 -2,-0.2 0.964 116.2 45.9 -59.4 -53.1 18.7 14.5 19.2 18 18 A K H X S+ 0 0 67 -4,-3.0 4,-2.4 1,-0.2 -2,-0.2 0.896 113.1 49.0 -58.4 -44.0 15.8 16.2 20.8 19 19 A N H X S+ 0 0 11 -4,-2.8 4,-1.8 1,-0.2 -1,-0.2 0.861 111.0 49.9 -68.8 -31.3 13.2 13.9 19.3 20 20 A S H X S+ 0 0 67 -4,-2.2 4,-1.1 2,-0.2 -1,-0.2 0.850 111.1 51.2 -71.3 -31.9 15.2 10.8 20.4 21 21 A E H X S+ 0 0 81 -4,-2.0 4,-1.9 -5,-0.2 -2,-0.2 0.900 108.1 51.1 -69.3 -43.1 15.3 12.4 23.9 22 22 A L H X S+ 0 0 6 -4,-2.4 4,-2.2 1,-0.2 -2,-0.2 0.883 105.3 56.1 -62.6 -38.9 11.5 12.9 23.8 23 23 A E H X S+ 0 0 99 -4,-1.8 4,-2.1 1,-0.2 -1,-0.2 0.851 106.5 51.3 -63.3 -32.3 11.0 9.3 22.9 24 24 A E H X S+ 0 0 132 -4,-1.1 4,-2.6 2,-0.2 -1,-0.2 0.926 108.8 49.1 -70.6 -43.5 12.9 8.3 26.0 25 25 A R H X S+ 0 0 101 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.881 110.6 52.5 -61.3 -38.1 10.8 10.5 28.3 26 26 A L H X S+ 0 0 8 -4,-2.2 4,-2.5 2,-0.2 5,-0.2 0.936 109.1 48.6 -62.9 -46.8 7.7 9.0 26.7 27 27 A S H X S+ 0 0 56 -4,-2.1 4,-2.1 1,-0.2 -2,-0.2 0.922 110.6 52.2 -59.4 -45.1 9.0 5.5 27.4 28 28 A T H X S+ 0 0 87 -4,-2.6 4,-2.0 1,-0.2 -2,-0.2 0.946 112.6 43.2 -57.3 -52.2 9.8 6.5 31.0 29 29 A L H X S+ 0 0 23 -4,-2.4 4,-3.5 2,-0.2 5,-0.3 0.867 110.2 55.2 -64.5 -39.2 6.3 7.9 31.7 30 30 A Q H X S+ 0 0 101 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.917 111.7 46.4 -61.0 -38.5 4.5 5.0 30.0 31 31 A N H X S+ 0 0 112 -4,-2.1 4,-1.4 -5,-0.2 -2,-0.2 0.872 114.8 45.1 -72.6 -34.6 6.4 2.7 32.3 32 32 A E H X S+ 0 0 54 -4,-2.0 4,-2.5 2,-0.2 -2,-0.2 0.919 114.2 49.4 -73.8 -42.4 5.7 4.8 35.5 33 33 A N H X S+ 0 0 0 -4,-3.5 4,-2.9 1,-0.2 5,-0.2 0.913 107.8 53.4 -63.7 -41.7 2.0 5.2 34.5 34 34 A Q H X S+ 0 0 96 -4,-2.3 4,-2.1 -5,-0.3 -1,-0.2 0.913 111.6 47.0 -59.3 -40.4 1.5 1.5 33.9 35 35 A M H X S+ 0 0 98 -4,-1.4 4,-2.0 2,-0.2 -2,-0.2 0.916 111.7 49.7 -66.3 -43.2 2.9 0.8 37.4 36 36 A L H X S+ 0 0 16 -4,-2.5 4,-2.7 1,-0.2 5,-0.2 0.886 110.1 51.1 -64.3 -37.1 0.7 3.5 39.0 37 37 A R H X S+ 0 0 62 -4,-2.9 4,-3.9 1,-0.2 -1,-0.2 0.926 108.4 52.0 -65.8 -40.7 -2.3 2.1 37.2 38 38 A H H X S+ 0 0 91 -4,-2.1 4,-2.8 -5,-0.2 -1,-0.2 0.873 112.7 45.7 -61.6 -37.0 -1.4 -1.4 38.6 39 39 A I H < S+ 0 0 90 -4,-2.0 -1,-0.2 2,-0.2 -2,-0.2 0.893 115.2 44.5 -72.0 -43.1 -1.2 0.0 42.1 40 40 A L H < S+ 0 0 73 -4,-2.7 -2,-0.2 -5,-0.2 -3,-0.2 0.971 118.4 50.3 -62.2 -47.4 -4.4 1.9 41.8 41 41 A K H < 0 0 141 -4,-3.9 -2,-0.2 1,-0.2 -3,-0.2 0.822 360.0 360.0 -56.7 -47.0 -5.8 -1.2 40.2 42 42 A N < 0 0 190 -4,-2.8 -1,-0.2 -5,-0.1 -4,-0.0 -0.821 360.0 360.0-114.3 360.0 -4.8 -3.9 42.7 43 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 44 1 B G >> 0 0 72 0, 0.0 4,-4.8 0, 0.0 5,-0.5 0.000 360.0 360.0 360.0 -68.4 22.1 20.0 -3.5 45 2 B S H >5 + 0 0 118 1,-0.2 4,-1.3 2,-0.2 5,-0.1 0.915 360.0 27.5 -59.2 -41.5 18.9 21.1 -5.3 46 3 B A H >5S+ 0 0 69 2,-0.2 4,-1.5 3,-0.2 -1,-0.2 0.665 123.5 54.5 -91.0 -20.5 17.5 17.7 -4.5 47 4 B Y H >5S+ 0 0 117 2,-0.2 4,-1.6 3,-0.2 -2,-0.2 0.953 112.9 40.9 -73.2 -54.8 19.7 17.5 -1.3 48 5 B L H X>S+ 0 0 42 -4,-4.8 4,-2.9 2,-0.2 5,-0.5 0.938 113.7 52.3 -58.7 -54.0 18.4 20.8 0.1 49 6 B S H X< S+ 0 0 92 -4,-2.6 3,-0.6 1,-0.2 -2,-0.2 0.926 113.2 47.0 -62.7 -44.6 -5.8 9.8 43.2 83 40 B L H 3< S+ 0 0 59 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.827 106.8 55.8 -68.4 -33.0 -3.4 7.5 45.0 84 41 B K H 3< 0 0 139 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.676 360.0 360.0 -75.3 -14.7 -2.3 10.0 47.6 85 42 B N << 0 0 182 -4,-0.8 -1,-0.3 -3,-0.6 -2,-0.1 -0.345 360.0 360.0-105.4 360.0 -5.9 10.5 48.7