==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 06-FEB-07 2OSQ . COMPND 2 MOLECULE: NUCLEOLAR PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR P.DEKA,M.BUCHELI,L.SKRISOVSKA,F.H.ALLAIN,C.MOORE, . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4787.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 63.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 25.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 20.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 7 A E 0 0 218 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -38.2 8.1 -8.9 1.4 2 8 A L - 0 0 106 1,-0.1 2,-0.2 2,-0.0 72,-0.1 -0.218 360.0-118.7 -77.4 171.7 9.2 -12.6 0.9 3 9 A S - 0 0 34 3,-0.3 3,-0.2 70,-0.2 -1,-0.1 -0.535 10.3-125.4-106.7 174.8 12.7 -13.8 0.5 4 10 A N S S+ 0 0 104 1,-0.2 2,-0.3 -2,-0.2 48,-0.3 0.826 101.7 14.2 -88.0 -36.8 14.5 -15.7 -2.3 5 11 A T S S+ 0 0 12 68,-0.1 -1,-0.2 46,-0.1 2,-0.2 -0.723 97.8 91.8-144.4 89.9 15.8 -18.6 -0.2 6 12 A R - 0 0 86 -2,-0.3 67,-1.4 -3,-0.2 2,-0.5 -0.639 39.5-170.7 179.0 118.5 14.2 -19.0 3.2 7 13 A L E -AB 43 72A 0 36,-2.7 36,-2.1 65,-0.3 2,-0.5 -0.973 14.0-147.5-122.7 124.9 11.2 -21.0 4.5 8 14 A F E -AB 42 71A 63 63,-2.9 63,-1.9 -2,-0.5 34,-0.3 -0.792 18.1-165.3 -93.6 123.4 9.8 -20.7 8.1 9 15 A V E -AB 41 70A 0 32,-2.5 32,-2.0 -2,-0.5 61,-0.2 -0.608 23.2 -98.5-103.6 165.7 8.4 -23.8 9.6 10 16 A R - 0 0 91 59,-1.1 2,-0.3 -2,-0.2 30,-0.2 -0.227 53.5 -74.8 -76.8 169.5 6.1 -24.3 12.6 11 17 A P - 0 0 59 0, 0.0 -1,-0.1 0, 0.0 27,-0.1 -0.509 50.3-150.2 -69.8 123.1 7.3 -25.4 16.1 12 18 A F - 0 0 15 -2,-0.3 4,-0.2 25,-0.3 27,-0.2 -0.576 13.6-113.4 -94.0 157.6 8.3 -29.0 16.3 13 19 A P > - 0 0 51 0, 0.0 3,-1.8 0, 0.0 -1,-0.2 0.239 63.1 -55.5 -69.8-161.5 8.0 -31.3 19.3 14 20 A L T 3 S+ 0 0 165 1,-0.3 -2,-0.0 24,-0.0 24,-0.0 0.716 135.7 67.8 -53.4 -19.8 10.9 -32.9 21.2 15 21 A D T 3 + 0 0 69 2,-0.0 2,-1.5 1,-0.0 -1,-0.3 0.087 67.1 134.7 -88.8 23.6 11.8 -34.3 17.8 16 22 A V < + 0 0 19 -3,-1.8 2,-0.3 -4,-0.2 20,-0.1 -0.586 33.8 120.5 -77.6 89.9 12.7 -30.8 16.6 17 23 A Q S > S- 0 0 78 -2,-1.5 4,-1.3 18,-0.1 3,-0.5 -0.924 77.4-104.3-145.5 168.8 16.0 -31.4 14.9 18 24 A E H > S+ 0 0 115 -2,-0.3 4,-2.9 1,-0.2 5,-0.3 0.756 109.8 75.7 -66.7 -24.2 17.7 -31.1 11.5 19 25 A S H > S+ 0 0 74 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.936 102.1 36.8 -52.2 -52.6 17.3 -34.9 11.1 20 26 A E H > S+ 0 0 9 -3,-0.5 4,-1.7 -5,-0.3 5,-0.3 0.883 114.3 57.1 -68.7 -39.5 13.6 -34.6 10.3 21 27 A L H X S+ 0 0 0 -4,-1.3 4,-3.0 1,-0.2 -2,-0.2 0.880 112.1 42.0 -59.2 -39.4 14.1 -31.3 8.4 22 28 A N H X S+ 0 0 52 -4,-2.9 4,-0.9 2,-0.2 -1,-0.2 0.887 114.7 49.3 -75.1 -40.9 16.6 -33.1 6.1 23 29 A E H < S+ 0 0 162 -4,-2.1 -2,-0.2 -5,-0.3 -1,-0.2 0.692 123.5 34.6 -71.3 -18.5 14.5 -36.2 5.8 24 30 A I H < S+ 0 0 17 -4,-1.7 -2,-0.2 -5,-0.1 -3,-0.2 0.863 127.8 32.4 -99.1 -56.7 11.5 -34.0 5.0 25 31 A F H X S+ 0 0 2 -4,-3.0 4,-0.6 -5,-0.3 3,-0.4 0.458 99.0 92.9 -81.0 -0.9 12.9 -31.1 3.0 26 32 A G T >< S+ 0 0 32 -4,-0.9 2,-3.2 1,-0.3 3,-1.2 0.973 74.7 58.7 -55.1 -61.4 15.4 -33.4 1.5 27 33 A P T 34 S+ 0 0 100 0, 0.0 -1,-0.3 0, 0.0 -4,-0.0 -0.287 99.9 62.5 -69.8 60.4 13.5 -34.4 -1.6 28 34 A F T 34 S- 0 0 50 -2,-3.2 -2,-0.2 -3,-0.4 25,-0.1 0.408 108.0 -61.2-148.9 -41.5 13.3 -30.8 -2.7 29 35 A G S << S- 0 0 21 -3,-1.2 2,-1.4 -4,-0.6 -1,-0.3 -0.952 70.8 -42.0 165.6 176.9 16.8 -29.4 -3.4 30 36 A P - 0 0 65 0, 0.0 16,-2.5 0, 0.0 2,-0.5 -0.505 57.1-143.1 -69.8 91.5 20.2 -28.6 -2.0 31 37 A M E -C 45 0A 67 -2,-1.4 14,-0.3 14,-0.3 3,-0.1 -0.410 8.3-159.8 -60.2 109.5 19.4 -27.0 1.3 32 38 A K E S- 0 0 102 12,-0.5 2,-0.3 -2,-0.5 13,-0.2 0.864 70.3 -20.8 -59.3 -37.1 21.9 -24.2 1.7 33 39 A E E -C 44 0A 115 11,-2.6 11,-2.0 -3,-0.0 2,-0.3 -0.981 58.9-147.9-165.3 166.4 21.3 -24.2 5.5 34 40 A V E -C 43 0A 29 -2,-0.3 2,-0.4 9,-0.2 9,-0.2 -0.997 4.5-164.5-146.4 148.0 18.8 -25.2 8.2 35 41 A K E -C 42 0A 56 7,-3.4 7,-3.1 -2,-0.3 2,-0.4 -0.997 3.8-176.4-137.7 133.0 17.7 -23.9 11.6 36 42 A I E +C 41 0A 44 -2,-0.4 2,-0.4 5,-0.2 5,-0.2 -0.929 12.0 166.7-133.4 109.8 15.7 -25.6 14.4 37 43 A L E > -C 40 0A 90 3,-2.2 3,-2.4 -2,-0.4 2,-1.2 -0.941 48.4 -97.4-124.1 145.3 14.7 -23.8 17.5 38 44 A N T 3 S+ 0 0 144 -2,-0.4 3,-0.1 1,-0.3 -24,-0.0 -0.401 117.3 21.7 -61.0 93.8 12.2 -24.6 20.3 39 45 A G T 3 S+ 0 0 36 -2,-1.2 2,-0.3 -27,-0.2 -1,-0.3 0.099 128.9 23.6 134.9 -22.5 9.3 -22.6 19.1 40 46 A F E < - C 0 37A 95 -3,-2.4 -3,-2.2 -30,-0.2 2,-0.3 -0.967 60.0-148.7-167.5 152.7 10.0 -22.1 15.4 41 47 A A E -AC 9 36A 0 -32,-2.0 -32,-2.5 -2,-0.3 2,-0.3 -0.905 8.9-167.8-128.6 156.9 12.0 -23.6 12.5 42 48 A F E -AC 8 35A 37 -7,-3.1 -7,-3.4 -2,-0.3 2,-0.3 -0.995 4.4-171.6-145.0 148.3 13.7 -22.3 9.4 43 49 A V E -AC 7 34A 0 -36,-2.1 -36,-2.7 -2,-0.3 2,-0.6 -0.946 6.0-163.0-146.0 120.9 15.2 -23.7 6.2 44 50 A E E - C 0 33A 55 -11,-2.0 -11,-2.6 -2,-0.3 -12,-0.5 -0.900 14.0-154.3-108.2 112.0 17.2 -21.9 3.5 45 51 A F E - C 0 31A 1 -2,-0.6 -14,-0.3 -14,-0.3 6,-0.1 -0.503 20.8-130.2 -82.8 151.8 17.5 -23.7 0.2 46 52 A E S S+ 0 0 110 -16,-2.5 2,-0.4 -2,-0.2 -15,-0.1 0.452 96.6 53.1 -78.9 0.0 20.4 -23.1 -2.2 47 53 A E S > S- 0 0 99 1,-0.1 4,-2.1 -17,-0.1 5,-0.2 -0.977 72.6-144.9-141.2 124.7 17.9 -22.6 -5.0 48 54 A A H > S+ 0 0 44 -2,-0.4 4,-3.3 1,-0.2 5,-0.2 0.881 104.5 54.5 -51.2 -42.3 14.9 -20.2 -5.0 49 55 A E H > S+ 0 0 146 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.950 106.0 49.9 -58.0 -52.6 12.9 -22.8 -7.0 50 56 A S H > S+ 0 0 13 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.874 115.4 45.3 -54.7 -39.7 13.5 -25.5 -4.4 51 57 A A H X S+ 0 0 0 -4,-2.1 4,-2.3 2,-0.2 -2,-0.2 0.955 109.9 51.6 -69.7 -52.4 12.4 -23.1 -1.7 52 58 A A H X S+ 0 0 43 -4,-3.3 4,-0.8 -48,-0.3 -2,-0.2 0.827 115.7 45.1 -54.0 -33.4 9.3 -21.8 -3.5 53 59 A K H >X S+ 0 0 126 -4,-2.3 4,-1.7 -5,-0.2 3,-1.1 0.955 109.2 51.5 -76.0 -53.9 8.3 -25.4 -4.1 54 60 A A H 3X>S+ 0 0 0 -4,-2.5 4,-2.5 1,-0.3 5,-0.7 0.819 106.0 59.1 -52.8 -32.4 8.9 -26.7 -0.5 55 61 A I H 3<5S+ 0 0 19 -4,-2.3 4,-0.5 1,-0.2 15,-0.3 0.863 113.6 35.5 -65.9 -36.8 6.8 -23.8 0.7 56 62 A E H <<5S+ 0 0 145 -3,-1.1 -2,-0.2 -4,-0.8 -1,-0.2 0.551 124.8 45.3 -92.4 -10.5 3.8 -25.0 -1.3 57 63 A E H <5S+ 0 0 104 -4,-1.7 -3,-0.2 -5,-0.1 -2,-0.2 0.896 116.2 37.7 -94.9 -61.8 4.7 -28.7 -0.7 58 64 A V T ><5S+ 0 0 0 -4,-2.5 3,-2.2 -5,-0.1 -3,-0.2 0.889 97.0 94.9 -58.4 -41.3 5.6 -28.9 3.0 59 65 A H T 3 +D 66 0B 54 3,-2.3 3,-0.7 -2,-0.3 -2,-0.0 -0.849 65.2 7.5-172.0 132.5 4.0 -34.5 11.3 64 70 A A T 3 S- 0 0 47 -2,-0.3 -49,-0.0 1,-0.2 -2,-0.0 0.866 127.4 -60.9 61.3 37.4 4.0 -35.5 15.0 65 71 A N T 3 S+ 0 0 176 1,-0.2 -1,-0.2 0, 0.0 -3,-0.0 0.833 121.4 98.8 59.3 33.1 0.2 -36.1 14.8 66 72 A Q E < S-D 63 0B 106 -3,-0.7 -3,-2.3 0, 0.0 2,-0.3 -0.997 82.1 -98.7-150.7 147.9 -0.2 -32.4 13.9 67 73 A P E -D 62 0B 90 0, 0.0 -5,-0.3 0, 0.0 2,-0.1 -0.506 40.0-139.2 -69.7 124.1 -0.6 -30.3 10.7 68 74 A L - 0 0 14 -7,-2.8 -8,-1.2 -2,-0.3 2,-0.3 -0.363 15.2-162.4 -80.4 162.7 2.6 -28.8 9.5 69 75 A E + 0 0 84 -10,-0.2 -59,-1.1 -9,-0.1 2,-0.4 -0.954 10.4 174.8-151.6 128.0 3.0 -25.2 8.2 70 76 A V E +B 9 0A 1 -2,-0.3 2,-0.3 -15,-0.3 -61,-0.2 -0.996 5.5 166.2-137.0 140.0 5.7 -23.6 6.1 71 77 A V E -B 8 0A 57 -63,-1.9 -63,-2.9 -2,-0.4 2,-1.0 -0.900 50.1 -70.5-143.8 171.6 6.0 -20.1 4.5 72 78 A Y E -B 7 0A 55 -2,-0.3 -65,-0.3 -65,-0.2 2,-0.1 -0.533 53.9-133.2 -70.0 100.9 8.5 -17.7 2.9 73 79 A S 0 0 9 -67,-1.4 -70,-0.2 -2,-1.0 -68,-0.1 -0.347 360.0 360.0 -58.4 124.8 10.6 -16.7 5.9 74 80 A K 0 0 191 -72,-0.1 -1,-0.2 -2,-0.1 -2,-0.0 0.787 360.0 360.0 -57.8 360.0 11.0 -12.9 5.8