==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 06-FEB-07 2OSR . COMPND 2 MOLECULE: NUCLEOLAR PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR P.DEKA,M.BUCHELI,L.SKRISOVSKA,F.H.ALLAIN,C.MOORE, . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6810.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 50.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 19.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 19.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 80 A K 0 0 209 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 172.0 -6.9 -14.5 4.3 2 81 A L - 0 0 141 1,-0.2 79,-0.1 79,-0.1 0, 0.0 -0.612 360.0-108.4 -98.6 159.4 -4.0 -12.0 4.0 3 82 A P - 0 0 99 0, 0.0 2,-0.2 0, 0.0 78,-0.2 0.133 25.7-147.4 -69.8-169.5 -0.9 -12.2 1.9 4 83 A A - 0 0 52 76,-0.1 2,-0.5 2,-0.0 75,-0.0 -0.782 15.6-164.1-169.7 120.8 2.7 -12.8 3.1 5 84 A K + 0 0 160 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.430 67.8 73.8-104.9 56.7 6.1 -11.6 1.9 6 85 A R S S- 0 0 174 -2,-0.5 75,-0.1 2,-0.1 -2,-0.0 -0.883 71.1-129.3-151.8-179.0 8.2 -14.1 3.8 7 86 A Y + 0 0 107 -2,-0.3 45,-3.1 45,-0.1 2,-0.3 -0.214 68.1 105.2-134.7 43.4 9.4 -17.7 3.9 8 87 A R E -A 51 0A 126 43,-0.3 72,-0.5 45,-0.1 2,-0.3 -0.908 40.8-175.6-125.9 153.5 8.7 -18.6 7.6 9 88 A I E -A 50 0A 2 41,-3.0 41,-2.8 -2,-0.3 2,-0.4 -0.965 17.4-131.0-144.9 159.9 6.1 -20.7 9.3 10 89 A T E -AB 49 78A 43 68,-2.3 68,-3.0 -2,-0.3 39,-0.3 -0.904 16.8-140.6-116.6 143.4 5.0 -21.7 12.8 11 90 A M E - B 0 77A 21 37,-2.4 37,-0.5 -2,-0.4 2,-0.3 -0.649 16.7-170.3 -99.6 157.4 4.2 -25.2 14.2 12 91 A K E + B 0 76A 91 64,-2.5 64,-2.5 -2,-0.2 35,-0.2 -0.989 60.1 30.5-146.3 152.7 1.5 -26.2 16.6 13 92 A N S S+ 0 0 81 33,-0.5 34,-0.2 32,-0.5 33,-0.1 0.884 74.8 132.4 67.8 39.5 0.4 -29.3 18.6 14 93 A L + 0 0 10 32,-2.4 2,-2.9 31,-0.2 -1,-0.1 -0.538 27.7 175.4-121.8 65.0 4.0 -30.4 18.9 15 94 A P + 0 0 72 0, 0.0 2,-0.3 0, 0.0 29,-0.0 -0.343 43.4 110.4 -69.8 66.3 4.4 -31.3 22.7 16 95 A E S S- 0 0 64 -2,-2.9 -2,-0.1 2,-0.1 30,-0.1 -0.924 81.6-112.7-138.7 162.9 7.9 -32.6 22.3 17 96 A G + 0 0 52 -2,-0.3 2,-0.2 29,-0.0 5,-0.2 0.369 62.3 146.7 -77.0 7.2 11.4 -31.5 23.4 18 97 A C - 0 0 21 -4,-0.1 -2,-0.1 4,-0.1 2,-0.1 -0.244 30.3-170.0 -49.0 106.4 12.2 -31.0 19.7 19 98 A S > - 0 0 44 -2,-0.2 4,-2.4 20,-0.1 5,-0.4 -0.369 42.2 -83.1 -95.5 177.2 14.7 -28.1 19.8 20 99 A W H > S+ 0 0 157 1,-0.3 4,-2.0 2,-0.2 5,-0.2 0.868 132.7 51.2 -46.3 -42.4 16.1 -26.0 17.0 21 100 A Q H > S+ 0 0 78 2,-0.2 4,-2.0 3,-0.2 -1,-0.3 0.913 112.2 46.0 -63.4 -44.2 18.7 -28.7 16.4 22 101 A D H > S+ 0 0 68 -3,-0.3 4,-2.5 2,-0.2 3,-0.5 0.989 115.4 42.8 -62.3 -62.9 16.0 -31.4 16.2 23 102 A L H X S+ 0 0 1 -4,-2.4 4,-2.1 1,-0.3 -1,-0.2 0.849 115.7 52.3 -52.6 -36.3 13.6 -29.6 13.9 24 103 A K H X S+ 0 0 88 -4,-2.0 4,-2.4 -5,-0.4 -1,-0.3 0.866 108.8 49.9 -69.0 -37.0 16.6 -28.5 11.9 25 104 A D H X S+ 0 0 64 -4,-2.0 4,-1.9 -3,-0.5 -2,-0.2 0.957 116.2 39.4 -66.3 -52.4 17.8 -32.1 11.6 26 105 A L H X S+ 0 0 53 -4,-2.5 4,-1.6 2,-0.2 -2,-0.2 0.854 115.5 54.8 -66.3 -35.3 14.5 -33.5 10.4 27 106 A A H <>S+ 0 0 5 -4,-2.1 5,-1.9 -5,-0.4 -2,-0.2 0.948 112.5 40.3 -63.3 -50.7 13.9 -30.4 8.2 28 107 A R H ><5S+ 0 0 127 -4,-2.4 3,-0.8 1,-0.2 -1,-0.2 0.817 117.2 50.6 -68.2 -31.0 17.2 -30.8 6.4 29 108 A E H 3<5S+ 0 0 122 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.734 104.3 58.3 -78.2 -23.5 16.7 -34.5 6.2 30 109 A N T 3<5S- 0 0 98 -4,-1.6 -1,-0.2 2,-0.2 -2,-0.2 0.108 129.1 -95.0 -92.3 21.4 13.2 -34.1 4.9 31 110 A S T < 5S+ 0 0 99 -3,-0.8 2,-0.4 1,-0.2 -3,-0.2 0.893 92.0 121.5 67.6 40.8 14.6 -32.2 1.9 32 111 A L < - 0 0 6 -5,-1.9 2,-0.4 -6,-0.1 -2,-0.2 -0.864 45.0-163.1-140.1 103.2 13.9 -28.8 3.6 33 112 A E - 0 0 133 -2,-0.4 21,-0.3 -5,-0.1 2,-0.3 -0.721 11.2-169.7 -89.0 131.1 16.8 -26.4 4.2 34 113 A T - 0 0 22 -2,-0.4 18,-0.3 18,-0.2 3,-0.1 -0.890 23.7-165.3-121.2 151.5 16.2 -23.6 6.8 35 114 A T S S+ 0 0 86 16,-1.8 2,-0.3 -2,-0.3 17,-0.2 0.565 80.5 29.3-106.9 -15.7 18.2 -20.5 7.7 36 115 A F E +C 51 0A 87 15,-1.4 15,-2.5 2,-0.0 2,-0.3 -0.998 62.7 176.9-147.6 143.7 16.4 -19.8 11.0 37 116 A S E +C 50 0A 28 -2,-0.3 2,-0.3 13,-0.2 13,-0.2 -0.971 1.5 172.9-145.0 158.0 14.7 -21.8 13.7 38 117 A S E -C 49 0A 52 11,-2.0 11,-3.1 -2,-0.3 2,-0.3 -0.962 4.7-173.3-165.4 147.5 13.0 -21.3 17.0 39 118 A V E -C 48 0A 48 -2,-0.3 2,-0.5 9,-0.3 9,-0.2 -0.878 23.9-124.9-139.3 170.9 11.0 -23.2 19.6 40 119 A N + 0 0 45 7,-0.8 6,-0.5 -2,-0.3 7,-0.4 -0.870 40.8 146.8-125.2 98.3 9.1 -22.7 22.9 41 120 A T + 0 0 109 -2,-0.5 -1,-0.1 1,-0.1 -22,-0.0 0.655 60.0 81.2-100.7 -22.1 10.2 -24.8 25.8 42 121 A R S S+ 0 0 219 2,-0.1 2,-0.2 3,-0.0 -1,-0.1 0.855 104.4 28.3 -51.7 -37.8 9.5 -22.3 28.5 43 122 A D S S- 0 0 82 1,-0.0 3,-0.4 0, 0.0 -3,-0.0 -0.652 83.0-116.2-118.7 176.0 5.8 -23.4 28.4 44 123 A F S S+ 0 0 184 -2,-0.2 -3,-0.1 1,-0.2 -2,-0.1 0.024 79.9 112.3-101.1 25.6 3.9 -26.5 27.4 45 124 A D S S- 0 0 84 -5,-0.1 -32,-0.5 2,-0.1 -31,-0.2 0.769 70.6-144.3 -68.0 -25.7 2.2 -24.8 24.5 46 125 A G + 0 0 9 -6,-0.5 -32,-2.4 -3,-0.4 -33,-0.5 0.980 46.7 138.1 58.6 61.5 4.2 -27.1 22.2 47 126 A T + 0 0 43 -7,-0.4 -7,-0.8 -35,-0.2 2,-0.2 -1.000 25.0 175.5-140.7 137.8 4.7 -24.6 19.4 48 127 A G E - C 0 39A 4 -37,-0.5 -37,-2.4 -2,-0.4 2,-0.3 -0.679 16.3-141.4-129.6-176.1 7.7 -23.8 17.2 49 128 A A E +AC 10 38A 22 -11,-3.1 -11,-2.0 -39,-0.3 2,-0.3 -0.963 15.1 179.0-154.4 133.6 8.8 -21.7 14.2 50 129 A L E -AC 9 37A 7 -41,-2.8 -41,-3.0 -2,-0.3 2,-0.3 -0.919 9.1-157.8-133.5 159.3 11.1 -22.2 11.2 51 130 A E E -AC 8 36A 45 -15,-2.5 -16,-1.8 -2,-0.3 -15,-1.4 -0.999 5.2-153.0-140.9 140.9 12.2 -20.2 8.2 52 131 A F - 0 0 3 -45,-3.1 -18,-0.2 -2,-0.3 -45,-0.1 -0.796 23.5-127.7-113.1 155.3 13.6 -21.2 4.8 53 132 A P S S+ 0 0 61 0, 0.0 2,-0.3 0, 0.0 -19,-0.1 0.748 96.1 36.8 -69.8 -24.6 15.9 -19.3 2.4 54 133 A S S > S- 0 0 41 -21,-0.3 4,-1.0 -47,-0.1 -2,-0.1 -0.898 75.4-129.7-129.0 158.3 13.4 -19.8 -0.5 55 134 A E H > S+ 0 0 90 -2,-0.3 4,-2.9 1,-0.2 5,-0.4 0.834 103.9 67.4 -73.7 -33.6 9.6 -20.0 -0.8 56 135 A E H > S+ 0 0 127 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.912 104.6 42.7 -52.3 -47.2 9.8 -23.3 -2.6 57 136 A I H > S+ 0 0 31 2,-0.2 4,-2.9 3,-0.2 -1,-0.2 0.825 113.4 54.5 -69.6 -32.2 11.0 -25.0 0.5 58 137 A L H X S+ 0 0 18 -4,-1.0 4,-2.5 2,-0.2 -2,-0.2 0.978 113.3 38.1 -65.4 -57.9 8.5 -23.1 2.6 59 138 A V H X S+ 0 0 54 -4,-2.9 4,-2.1 2,-0.2 -2,-0.2 0.889 121.3 47.4 -61.0 -40.7 5.4 -24.1 0.7 60 139 A E H X S+ 0 0 92 -4,-2.1 4,-1.8 -5,-0.4 -2,-0.2 0.957 115.4 42.9 -66.0 -52.3 6.7 -27.6 0.2 61 140 A A H X S+ 0 0 0 -4,-2.9 4,-1.7 1,-0.2 5,-0.2 0.834 114.4 53.2 -63.2 -33.0 7.7 -28.1 3.8 62 141 A L H X S+ 0 0 44 -4,-2.5 4,-2.0 -5,-0.2 15,-0.3 0.888 113.8 40.7 -69.7 -40.1 4.5 -26.5 4.9 63 142 A E H < S+ 0 0 119 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.696 119.3 47.2 -80.5 -20.4 2.4 -28.9 2.8 64 143 A R H < S+ 0 0 189 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.689 120.5 36.9 -91.9 -22.6 4.6 -31.8 3.7 65 144 A L H < S+ 0 0 15 -4,-1.7 -2,-0.2 -5,-0.2 -3,-0.2 0.738 88.2 109.5 -98.3 -30.6 4.6 -31.0 7.4 66 145 A N S < S+ 0 0 75 -4,-2.0 10,-0.2 -5,-0.2 9,-0.1 -0.254 92.3 1.9 -51.1 121.5 1.0 -29.8 7.7 67 146 A N S S+ 0 0 108 8,-0.2 2,-0.3 1,-0.2 9,-0.2 0.979 88.7 160.3 60.2 86.1 -0.9 -32.5 9.6 68 147 A I E -D 75 0B 49 7,-2.2 7,-2.5 2,-0.1 2,-0.4 -1.000 38.3-125.6-141.1 139.9 1.7 -35.1 10.6 69 148 A E E +D 74 0B 158 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.711 38.3 157.9 -87.2 128.6 1.8 -37.8 13.2 70 149 A F E > -D 73 0B 116 3,-2.8 3,-1.6 -2,-0.4 -2,-0.1 -0.907 67.1 -9.9-154.9 121.9 4.8 -37.8 15.5 71 150 A R T 3 S- 0 0 168 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 0.832 127.9 -56.6 60.4 32.8 5.2 -39.3 19.0 72 151 A G T 3 S+ 0 0 70 1,-0.2 2,-0.4 0, 0.0 -1,-0.3 0.594 121.0 108.4 75.6 9.8 1.5 -40.0 19.1 73 152 A S E < -D 70 0B 22 -3,-1.6 -3,-2.8 -5,-0.0 2,-0.9 -0.962 68.1-133.0-123.9 138.4 0.8 -36.3 18.5 74 153 A V E -D 69 0B 74 -2,-0.4 2,-0.2 -5,-0.2 -5,-0.2 -0.771 26.9-164.2 -92.2 102.6 -0.5 -34.6 15.3 75 154 A I E -D 68 0B 11 -7,-2.5 -7,-2.2 -2,-0.9 2,-0.3 -0.610 4.0-166.1 -87.3 145.8 1.7 -31.6 14.5 76 155 A T E -B 12 0A 35 -64,-2.5 -64,-2.5 -2,-0.2 2,-0.4 -0.969 8.9-147.6-133.3 148.3 0.6 -28.9 12.1 77 156 A V E +B 11 0A 6 -2,-0.3 2,-0.3 -15,-0.3 -66,-0.2 -0.942 18.3 171.2-118.8 137.0 2.4 -26.0 10.4 78 157 A E E -B 10 0A 105 -68,-3.0 -68,-2.3 -2,-0.4 2,-0.0 -0.977 31.4-119.5-147.3 130.0 0.9 -22.6 9.4 79 158 A R - 0 0 106 -2,-0.3 2,-0.3 -70,-0.3 -70,-0.2 -0.348 25.4-167.5 -66.8 145.5 2.5 -19.5 8.1 80 159 A D - 0 0 82 -72,-0.5 2,-0.6 -2,-0.0 -76,-0.1 -0.859 3.1-168.4-141.4 103.2 2.2 -16.3 10.2 81 160 A D + 0 0 50 -2,-0.3 -79,-0.1 -78,-0.2 -72,-0.0 -0.817 10.7 171.6 -95.7 122.2 3.1 -12.9 8.8 82 161 A N + 0 0 122 -2,-0.6 -1,-0.1 -78,-0.0 -78,-0.0 -0.596 13.4 176.6-130.0 71.3 3.3 -10.1 11.3 83 162 A P - 0 0 81 0, 0.0 -2,-0.0 0, 0.0 -79,-0.0 -0.146 35.8 -85.2 -69.8 167.8 4.7 -7.0 9.5 84 163 A P - 0 0 110 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.145 48.9 -94.2 -69.8 167.7 5.2 -3.6 11.1 85 164 A P - 0 0 95 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.112 35.7-101.6 -69.7-170.9 2.5 -0.9 11.3 86 165 A I 0 0 183 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.709 360.0 360.0 -88.2 -23.4 1.9 2.0 8.9 87 166 A R 0 0 256 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.307 360.0 360.0 -71.3 360.0 3.6 4.6 11.1