==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 07-FEB-07 2OT2 . COMPND 2 MOLECULE: HYDROGENASE ISOENZYMES FORMATION PROTEIN HYPC; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K12; . AUTHOR L.WANG,C.JIN . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6049.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 72.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 30.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 18.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 228 0, 0.0 52,-0.0 0, 0.0 89,-0.0 0.000 360.0 360.0 360.0 -75.7 1.5 4.3 0.7 2 2 A C - 0 0 107 50,-0.1 2,-0.3 49,-0.0 49,-0.0 -0.225 360.0-175.2 -62.8 158.2 -1.6 5.8 -0.9 3 3 A I + 0 0 37 2,-0.0 49,-1.9 0, 0.0 -1,-0.0 -0.964 21.4 163.7-153.5 154.7 -1.3 8.5 -3.7 4 4 A G E +A 51 0A 46 -2,-0.3 47,-0.2 47,-0.2 -2,-0.0 -0.248 40.3 117.9-172.8 56.9 -3.9 10.6 -5.6 5 5 A V E -A 50 0A 43 45,-1.5 45,-2.3 43,-0.0 63,-0.0 -0.986 61.0-108.7-139.2 141.1 -2.1 13.5 -7.3 6 6 A P E +A 49 0A 1 0, 0.0 2,-0.3 0, 0.0 43,-0.2 -0.309 42.6 162.6 -59.3 157.6 -1.4 14.7 -10.9 7 7 A G E -A 48 0A 0 41,-2.1 41,-2.6 14,-0.2 2,-0.4 -0.963 38.1 -98.4-164.3 172.7 2.0 14.3 -12.5 8 8 A Q E -AB 47 20A 35 12,-2.1 12,-2.6 -2,-0.3 2,-2.0 -0.859 30.5-122.0 -99.6 135.7 3.8 14.4 -15.9 9 9 A I E + B 0 19A 0 37,-3.0 36,-2.8 -2,-0.4 37,-0.2 -0.577 46.4 169.5 -68.5 80.0 4.7 11.1 -17.7 10 10 A R E + 0 0 109 -2,-2.0 2,-0.3 8,-0.7 -1,-0.2 0.766 60.4 3.1 -80.1 -24.7 8.3 12.3 -17.6 11 11 A T E - B 0 18A 60 7,-0.7 7,-2.5 -3,-0.2 2,-0.3 -0.964 64.7-149.3-151.6 158.6 9.9 8.9 -18.7 12 12 A I E + B 0 17A 41 -2,-0.3 5,-0.3 5,-0.3 3,-0.1 -0.964 14.5 176.5-130.0 146.3 8.5 5.5 -19.8 13 13 A D - 0 0 139 3,-2.5 2,-0.2 -2,-0.3 4,-0.2 0.573 67.5 -65.4-121.8 -23.6 10.1 2.0 -19.3 14 14 A G S S- 0 0 37 2,-2.1 -1,-0.2 21,-0.0 16,-0.0 -0.802 109.1 -12.3 171.3-126.8 7.4 -0.3 -20.6 15 15 A N S S+ 0 0 72 -2,-0.2 15,-2.4 -3,-0.1 2,-0.3 0.795 132.7 68.7 -63.8 -29.2 4.0 -0.8 -19.1 16 16 A Q E S- C 0 29A 54 13,-0.2 -3,-2.5 14,-0.1 -2,-2.1 -0.655 70.1-172.0 -86.4 151.9 5.5 1.1 -16.2 17 17 A A E -BC 12 28A 0 11,-2.3 11,-2.5 -2,-0.3 2,-0.8 -0.896 29.1-121.7-138.6 166.0 6.4 4.7 -16.4 18 18 A K E -BC 11 27A 97 -7,-2.5 -8,-0.7 -2,-0.3 -7,-0.7 -0.810 33.9-168.0-114.5 78.2 8.3 7.2 -14.2 19 19 A V E -BC 9 26A 0 7,-1.7 7,-2.7 -2,-0.8 2,-0.9 -0.636 19.5-134.3 -74.2 123.4 5.7 9.9 -13.6 20 20 A D E -BC 8 25A 43 -12,-2.6 -12,-2.1 -2,-0.4 2,-1.8 -0.739 12.0-155.9 -75.0 107.9 7.1 13.1 -12.0 21 21 A V - 0 0 18 3,-2.4 -14,-0.2 -2,-0.9 3,-0.1 -0.483 61.2 -78.4 -85.5 61.2 4.5 13.8 -9.3 22 22 A C S S+ 0 0 53 -2,-1.8 -1,-0.1 1,-0.2 3,-0.1 0.780 127.5 27.1 45.9 44.0 5.6 17.5 -9.4 23 23 A G S S+ 0 0 52 1,-0.2 2,-0.3 63,-0.0 -1,-0.2 0.080 125.7 13.9 171.6 -36.7 8.8 17.0 -7.3 24 24 A I S S- 0 0 89 -3,-0.1 -3,-2.4 -5,-0.1 2,-0.3 -0.979 78.2-100.8-153.7 152.9 10.1 13.4 -7.7 25 25 A Q E -C 20 0A 75 -2,-0.3 2,-0.3 -5,-0.3 -5,-0.3 -0.584 32.7-167.2 -77.5 138.7 9.4 10.5 -10.1 26 26 A R E -C 19 0A 68 -7,-2.7 -7,-1.7 -2,-0.3 2,-0.4 -0.939 28.1-113.4-117.9 144.9 7.2 7.6 -9.0 27 27 A D E -C 18 0A 102 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.683 42.9-176.9 -74.6 129.9 6.8 4.3 -10.7 28 28 A V E -C 17 0A 1 -11,-2.5 -11,-2.3 -2,-0.4 2,-0.4 -0.997 26.7-127.1-137.0 136.1 3.3 4.1 -12.1 29 29 A D E -Cd 16 54A 31 24,-2.6 26,-2.3 -2,-0.4 3,-0.3 -0.723 17.1-167.9 -82.4 126.3 1.4 1.3 -14.0 30 30 A L >> + 0 0 0 -15,-2.4 4,-2.8 -2,-0.4 3,-2.4 0.251 50.7 116.5-100.8 10.9 -0.1 2.5 -17.3 31 31 A T T 34 S+ 0 0 87 1,-0.3 -1,-0.2 2,-0.2 -15,-0.0 0.829 74.6 56.6 -50.8 -36.6 -2.4 -0.5 -18.1 32 32 A L T 34 S+ 0 0 118 -3,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.575 125.4 18.9 -74.5 -10.4 -5.5 1.7 -17.7 33 33 A V T <4 S- 0 0 26 -3,-2.4 -2,-0.2 24,-0.1 -1,-0.2 0.508 105.0-119.6-132.2 -17.6 -4.3 4.2 -20.4 34 34 A G < - 0 0 30 -4,-2.8 -3,-0.1 1,-0.1 -2,-0.1 0.358 24.8-100.0 74.2 145.9 -1.6 2.3 -22.4 35 35 A S S S+ 0 0 23 7,-0.1 8,-2.4 2,-0.0 2,-0.3 0.547 105.3 52.5 -73.6 -5.3 2.0 3.6 -22.6 36 36 A C B S-F 42 0B 61 6,-0.3 5,-0.0 7,-0.1 2,-0.0 -0.940 84.4-113.5-132.0 151.8 1.2 5.1 -26.1 37 37 A D > - 0 0 47 4,-2.9 3,-2.2 -2,-0.3 -2,-0.0 -0.225 47.7 -91.6 -66.1 165.6 -1.4 7.4 -27.7 38 38 A E T 3 S+ 0 0 197 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.828 128.9 54.4 -52.5 -37.5 -3.9 6.0 -30.3 39 39 A N T 3 S- 0 0 136 2,-0.1 -1,-0.3 1,-0.1 -2,-0.0 0.254 124.5-103.4 -85.9 10.2 -1.4 7.0 -33.1 40 40 A G S < S+ 0 0 51 -3,-2.2 -2,-0.1 1,-0.3 -1,-0.1 0.501 73.1 146.0 83.7 5.3 1.4 5.0 -31.4 41 41 A Q - 0 0 107 1,-0.1 -4,-2.9 2,-0.0 -1,-0.3 -0.580 56.7-113.0 -70.1 132.5 3.2 8.1 -30.0 42 42 A P B -F 36 0B 85 0, 0.0 -6,-0.3 0, 0.0 -1,-0.1 -0.460 23.9-122.8 -65.9 141.4 4.8 7.3 -26.6 43 43 A R > + 0 0 32 -8,-2.4 3,-2.3 -2,-0.1 -34,-0.3 0.329 61.1 142.5 -72.8 8.6 3.0 9.3 -23.8 44 44 A V T 3 S+ 0 0 68 1,-0.3 -34,-0.2 -9,-0.2 3,-0.1 -0.317 72.7 19.5 -53.1 125.5 6.3 11.0 -22.7 45 45 A G T 3 S+ 0 0 23 -36,-2.8 -1,-0.3 1,-0.4 -35,-0.1 0.063 98.2 114.0 97.7 -19.3 5.4 14.6 -21.7 46 46 A Q < - 0 0 53 -3,-2.3 -37,-3.0 -37,-0.2 -1,-0.4 -0.275 64.1-122.0 -70.1 167.4 1.6 14.0 -21.3 47 47 A W E -AE 8 59A 48 12,-1.6 12,-2.6 -39,-0.3 2,-0.3 -0.722 27.1-174.4-116.0 162.8 0.1 14.3 -17.8 48 48 A V E -AE 7 58A 0 -41,-2.6 -41,-2.1 10,-0.3 2,-0.7 -0.994 31.6-116.5-156.6 146.2 -1.8 11.8 -15.7 49 49 A L E -AE 6 57A 43 8,-2.7 7,-2.9 -2,-0.3 8,-0.7 -0.855 34.3-151.6 -83.8 112.1 -3.7 11.4 -12.4 50 50 A V E +AE 5 55A 2 -45,-2.3 -45,-1.5 -2,-0.7 2,-0.3 -0.810 22.8 170.4 -84.7 127.8 -1.6 9.0 -10.3 51 51 A H E > -AE 4 54A 85 3,-2.7 3,-2.6 -2,-0.5 -47,-0.2 -0.988 65.9 -19.5-141.0 130.2 -3.9 7.0 -7.9 52 52 A V T 3 S- 0 0 83 -49,-1.9 3,-0.1 -2,-0.3 -48,-0.1 0.733 126.7 -52.7 41.7 35.8 -2.8 4.0 -5.8 53 53 A G T 3 S+ 0 0 28 1,-0.3 -24,-2.6 -25,-0.0 2,-0.3 0.494 120.1 97.6 86.8 6.9 0.2 3.4 -8.2 54 54 A F E < S-dE 29 51A 87 -3,-2.6 -3,-2.7 -26,-0.2 2,-0.9 -0.873 84.3-103.8-122.4 154.8 -1.9 3.4 -11.4 55 55 A A E - E 0 50A 0 -26,-2.3 -5,-0.2 -2,-0.3 3,-0.2 -0.711 35.5-175.7 -71.8 104.9 -2.7 5.9 -14.1 56 56 A M E S- 0 0 112 -7,-2.9 2,-0.3 -2,-0.9 -1,-0.2 0.952 70.3 -11.2 -70.1 -47.8 -6.3 6.8 -13.1 57 57 A S E - E 0 49A 51 -8,-0.7 -8,-2.7 -3,-0.1 2,-0.3 -0.975 64.3-130.0-152.0 136.2 -6.8 9.1 -16.1 58 58 A V E + E 0 48A 48 -2,-0.3 -10,-0.3 -10,-0.2 2,-0.3 -0.736 40.6 178.0 -84.1 138.7 -4.4 10.6 -18.7 59 59 A I E - E 0 47A 21 -12,-2.6 -12,-1.6 -2,-0.3 2,-0.1 -0.891 29.1 -97.1-141.9 163.0 -5.0 14.4 -19.0 60 60 A N > - 0 0 100 -2,-0.3 4,-2.4 -14,-0.1 5,-0.2 -0.378 41.4-104.8 -77.0 166.2 -3.8 17.5 -20.8 61 61 A E H > S+ 0 0 118 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.887 121.4 52.3 -57.6 -43.1 -1.2 20.0 -19.2 62 62 A A H > S+ 0 0 65 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.873 109.4 48.5 -66.5 -38.6 -4.0 22.5 -18.5 63 63 A E H > S+ 0 0 94 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.923 114.2 46.3 -67.0 -44.4 -6.2 19.9 -16.7 64 64 A A H X S+ 0 0 0 -4,-2.4 4,-2.9 2,-0.2 -2,-0.2 0.946 113.4 49.0 -62.0 -48.6 -3.2 18.8 -14.6 65 65 A R H X S+ 0 0 142 -4,-3.0 4,-2.3 2,-0.2 -2,-0.2 0.913 113.3 46.7 -58.8 -46.8 -2.2 22.4 -13.8 66 66 A D H X S+ 0 0 87 -4,-2.5 4,-2.1 2,-0.2 -1,-0.2 0.920 113.8 48.0 -63.2 -43.1 -5.8 23.3 -12.8 67 67 A T H X S+ 0 0 51 -4,-2.5 4,-2.9 1,-0.2 -2,-0.2 0.914 112.7 48.9 -64.2 -42.0 -6.1 20.1 -10.7 68 68 A L H X S+ 0 0 29 -4,-2.9 4,-2.6 2,-0.2 -1,-0.2 0.874 109.3 52.5 -65.2 -40.4 -2.7 20.9 -9.0 69 69 A D H X S+ 0 0 90 -4,-2.3 4,-0.7 -5,-0.2 -1,-0.2 0.907 115.1 41.5 -63.6 -41.2 -3.7 24.5 -8.3 70 70 A A H >< S+ 0 0 55 -4,-2.1 3,-0.7 2,-0.2 4,-0.4 0.942 115.8 50.3 -66.7 -48.4 -6.9 23.3 -6.6 71 71 A L H >< S+ 0 0 58 -4,-2.9 3,-0.7 1,-0.3 -2,-0.2 0.883 110.8 46.8 -62.0 -45.0 -5.2 20.4 -4.8 72 72 A Q H >X S+ 0 0 65 -4,-2.6 4,-3.1 1,-0.2 3,-2.4 0.678 88.2 88.9 -72.2 -18.3 -2.3 22.5 -3.3 73 73 A N H > S+ 0 0 118 0, 0.0 4,-1.6 0, 0.0 3,-1.4 0.597 102.1 91.8 -65.8 -7.6 5.3 27.5 4.5 80 80 A D H 3> S+ 0 0 80 1,-0.3 4,-2.6 2,-0.2 5,-0.2 0.801 73.1 68.9 -52.3 -29.7 4.4 23.8 5.2 81 81 A V H <> S+ 0 0 42 -3,-1.8 4,-2.6 -6,-0.7 -1,-0.3 0.879 102.3 43.6 -58.0 -37.1 4.3 23.4 1.4 82 82 A G H <> S+ 0 0 22 -3,-1.4 4,-2.8 2,-0.2 -2,-0.2 0.915 110.5 53.6 -75.7 -42.2 8.1 23.9 1.4 83 83 A A H < S+ 0 0 60 -4,-1.6 -2,-0.2 1,-0.2 4,-0.2 0.887 115.9 41.6 -58.9 -40.2 8.6 21.6 4.4 84 84 A L H >< S+ 0 0 44 -4,-2.6 3,-1.4 2,-0.2 5,-0.3 0.972 115.9 48.3 -64.8 -58.5 6.6 18.9 2.4 85 85 A L H 3< S+ 0 0 71 -4,-2.6 -2,-0.2 1,-0.3 -3,-0.2 0.870 121.2 33.8 -57.8 -45.2 8.3 19.6 -1.0 86 86 A Y T 3< S+ 0 0 205 -4,-2.8 -1,-0.3 -5,-0.1 -2,-0.2 0.305 108.8 88.6 -95.7 6.6 11.9 19.6 0.3 87 87 A G S < S- 0 0 27 -3,-1.4 3,-0.1 -5,-0.2 -3,-0.1 -0.306 78.1-126.1 -95.1-177.3 11.3 16.9 3.0 88 88 A E S S+ 0 0 191 1,-0.1 -4,-0.1 -2,-0.1 -3,-0.1 0.090 78.6 107.7-118.1 15.7 11.4 13.1 2.9 89 89 A E 0 0 136 -5,-0.3 -1,-0.1 0, 0.0 -5,-0.1 0.311 360.0 360.0 -74.8 6.3 7.8 12.6 4.3 90 90 A K 0 0 101 -6,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.855 360.0 360.0-151.7 360.0 6.8 11.5 0.7