==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 27-MAR-03 1OVY . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L18; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; . AUTHOR C.F.TURNER,P.B.MOORE . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5942.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 68.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 12.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 26.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 24 A G 0 0 31 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 57.4 -8.0 0.8 2.0 2 25 A T - 0 0 121 4,-0.0 22,-0.1 3,-0.0 23,-0.0 0.152 360.0 -5.8-146.9 16.1 -11.8 0.6 1.8 3 26 A T S S+ 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.085 129.2 59.3-177.3 -40.6 -12.8 4.2 2.5 4 27 A E S S- 0 0 160 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.959 130.2 -50.4 -69.8 -54.5 -9.6 6.1 3.3 5 28 A R - 0 0 138 19,-0.1 2,-0.7 2,-0.0 17,-0.1 -0.180 52.0-148.2 171.9 83.0 -7.8 5.4 0.0 6 29 A P + 0 0 37 0, 0.0 2,-0.3 0, 0.0 18,-0.2 -0.505 58.2 87.2 -67.0 106.7 -7.6 1.8 -1.3 7 30 A R S S- 0 0 107 -2,-0.7 15,-1.0 16,-0.4 2,-0.2 -0.956 86.1 -56.9 177.7 169.6 -4.2 1.6 -3.2 8 31 A L E -A 21 0A 0 63,-0.4 2,-0.4 -2,-0.3 13,-0.3 -0.456 56.9-151.3 -64.3 129.9 -0.5 1.0 -3.0 9 32 A S E -A 20 0A 9 11,-3.4 11,-2.6 63,-0.2 2,-0.4 -0.881 17.5-177.2-110.9 139.4 0.9 3.5 -0.4 10 33 A V E +A 19 0A 1 -2,-0.4 65,-0.6 9,-0.2 64,-0.4 -0.913 17.3 151.0-139.0 108.9 4.4 4.9 -0.4 11 34 A F E -A 18 0A 75 7,-1.9 7,-2.0 -2,-0.4 2,-0.8 -0.899 46.4-107.3-134.0 163.4 5.5 7.2 2.4 12 35 A R E -A 17 0A 195 -2,-0.3 2,-1.5 5,-0.3 5,-0.3 -0.825 25.7-149.8 -96.3 110.8 8.7 8.2 4.2 13 36 A S E > -A 16 0A 25 3,-1.3 3,-1.9 -2,-0.8 2,-1.3 -0.619 58.4 -70.9 -82.3 88.4 8.8 6.8 7.7 14 37 A N T 3 S- 0 0 139 -2,-1.5 -2,-0.1 1,-0.3 -1,-0.0 -0.482 122.4 -3.9 66.6 -93.8 10.9 9.3 9.6 15 38 A K T 3 S+ 0 0 160 -2,-1.3 2,-0.3 2,-0.0 -1,-0.3 0.360 131.1 60.7-111.0 1.9 14.4 8.7 8.1 16 39 A H E < S-A 13 0A 14 -3,-1.9 -3,-1.3 31,-0.0 2,-0.8 -0.848 84.5-109.2-127.1 163.8 13.5 5.7 5.9 17 40 A I E -A 12 0A 7 28,-0.9 2,-0.6 -5,-0.3 -5,-0.3 -0.833 30.4-151.1 -98.5 109.8 11.1 5.1 3.0 18 41 A Y E -A 11 0A 52 -7,-2.0 -7,-1.9 -2,-0.8 2,-0.5 -0.692 3.6-156.6 -83.8 121.4 8.2 2.9 4.1 19 42 A A E +AB 10 33A 0 14,-1.6 14,-1.3 -2,-0.6 2,-0.4 -0.844 20.6 170.2 -96.7 123.8 6.7 0.8 1.3 20 43 A Q E -AB 9 32A 65 -11,-2.6 -11,-3.4 -2,-0.5 2,-0.6 -0.950 17.7-162.9-141.0 119.9 3.1 -0.2 2.0 21 44 A I E +AB 8 31A 0 10,-1.5 10,-0.9 -2,-0.4 2,-0.4 -0.893 10.9 177.3-106.5 123.0 0.6 -1.8 -0.3 22 45 A I E - B 0 30A 14 -15,-1.0 8,-0.3 -2,-0.6 -15,-0.2 -0.983 35.8-103.4-124.5 129.0 -3.1 -1.7 0.5 23 46 A D - 0 0 29 6,-0.6 -16,-0.4 -2,-0.4 5,-0.2 0.083 28.7-146.0 -47.1 158.4 -5.7 -3.2 -1.8 24 47 A D - 0 0 12 3,-0.5 -17,-0.2 -18,-0.2 4,-0.1 0.592 58.6 -45.0 -95.5-115.6 -7.8 -1.0 -4.0 25 48 A T S S+ 0 0 134 72,-0.2 3,-0.1 2,-0.1 -2,-0.1 0.619 138.2 31.5 -98.3 -16.9 -11.4 -1.7 -5.0 26 49 A K S S- 0 0 149 1,-0.3 2,-0.3 71,-0.1 -3,-0.1 0.841 116.9 -79.3-103.0 -60.3 -10.9 -5.4 -5.7 27 50 A S + 0 0 43 -5,-0.1 -3,-0.5 -21,-0.0 40,-0.3 -0.928 52.6 144.3 168.0 171.2 -8.2 -6.7 -3.5 28 51 A A - 0 0 8 -2,-0.3 2,-0.2 37,-0.2 -5,-0.2 -0.964 57.5 -32.6 166.2-159.7 -4.4 -6.9 -2.9 29 52 A T - 0 0 6 -2,-0.3 -6,-0.6 30,-0.2 33,-0.1 -0.561 35.0-160.5 -86.9 152.6 -2.0 -6.9 0.0 30 53 A I E S+B 22 0A 111 -8,-0.3 2,-0.3 -2,-0.2 -8,-0.2 -0.167 72.1 40.1-121.7 35.3 -2.7 -4.9 3.2 31 54 A V E +B 21 0A 86 -10,-0.9 -10,-1.5 27,-0.1 2,-0.2 -0.898 51.0 157.9-161.5-173.8 0.9 -4.9 4.4 32 55 A S E -B 20 0A 18 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.2 -0.854 35.8 -81.1 176.4-140.0 4.6 -4.5 3.3 33 56 A A E +B 19 0A 0 -14,-1.3 -14,-1.6 -2,-0.2 2,-0.2 -0.995 36.0 149.9-159.9 154.4 7.9 -3.5 4.9 34 57 A S S > S- 0 0 0 -2,-0.3 3,-3.0 -16,-0.2 6,-0.2 -0.851 72.6 -46.2-160.1-167.6 10.2 -0.7 5.9 35 58 A T T 3 S+ 0 0 22 1,-0.3 8,-0.4 -2,-0.2 6,-0.1 0.776 133.7 63.5 -45.0 -26.9 12.9 0.1 8.5 36 59 A L T 3 S+ 0 0 124 6,-0.1 -1,-0.3 4,-0.1 2,-0.1 0.167 87.5 106.9 -84.9 17.9 10.4 -1.5 10.9 37 60 A D S <> S- 0 0 33 -3,-3.0 4,-0.6 1,-0.1 -4,-0.1 -0.298 71.8-126.7 -90.3 177.2 10.8 -4.8 9.0 38 61 A K T >4 S+ 0 0 180 2,-0.2 3,-0.9 1,-0.1 -1,-0.1 0.938 101.2 51.7 -88.1 -65.3 12.6 -8.0 10.0 39 62 A E T 34 S+ 0 0 115 1,-0.3 -1,-0.1 2,-0.1 11,-0.0 0.782 109.6 56.4 -45.1 -31.6 15.1 -8.8 7.2 40 63 A F T 34 S+ 0 0 16 -6,-0.2 2,-0.5 1,-0.2 -1,-0.3 0.925 85.6 179.6 -69.3 -45.1 16.3 -5.3 7.5 41 64 A G << + 0 0 40 -3,-0.9 2,-1.0 -4,-0.6 -1,-0.2 -0.677 56.4 8.2 84.4-127.8 17.2 -5.5 11.2 42 65 A L S S- 0 0 162 -2,-0.5 -6,-0.1 1,-0.2 -1,-0.1 -0.774 129.4 -31.9 -96.7 96.0 18.6 -2.5 12.9 43 66 A D S S+ 0 0 108 -2,-1.0 -1,-0.2 -8,-0.4 -7,-0.0 0.679 85.1 118.3 65.9 128.0 18.4 0.4 10.4 44 67 A S > + 0 0 39 -3,-0.1 3,-1.9 5,-0.0 6,-0.5 0.101 51.4 86.5 175.0 -36.6 18.7 -0.3 6.6 45 68 A T T 3 + 0 0 0 1,-0.3 -28,-0.9 5,-0.2 6,-0.2 0.704 66.8 91.8 -57.7 -19.2 15.4 0.8 5.0 46 69 A N T 3 S+ 0 0 94 -30,-0.2 2,-0.5 2,-0.1 -1,-0.3 0.861 87.7 53.1 -44.0 -36.9 17.0 4.3 4.8 47 70 A N S X> S- 0 0 76 -3,-1.9 3,-1.9 1,-0.1 4,-0.9 -0.884 93.7-130.0-103.4 125.2 18.2 3.0 1.4 48 71 A I H 3> S+ 0 0 18 -2,-0.5 4,-3.5 1,-0.3 5,-0.3 0.717 97.8 85.6 -47.0 -21.6 15.4 1.7 -0.8 49 72 A E H 3> S+ 0 0 151 2,-0.2 4,-0.8 1,-0.2 -1,-0.3 0.906 101.3 30.5 -46.5 -48.0 17.6 -1.4 -1.3 50 73 A A H X> S+ 0 0 4 -3,-1.9 4,-1.4 -6,-0.5 3,-1.0 0.963 119.9 50.0 -77.2 -56.8 16.2 -2.9 1.9 51 74 A A H 3X S+ 0 0 0 -4,-0.9 4,-1.8 1,-0.3 -2,-0.2 0.829 113.6 51.0 -51.6 -29.6 12.7 -1.4 1.8 52 75 A K H 3X S+ 0 0 58 -4,-3.5 4,-1.6 -5,-0.3 5,-0.4 0.802 98.8 66.8 -77.0 -30.7 12.7 -2.7 -1.8 53 76 A K H S+ 0 0 12 -4,-1.4 4,-3.3 2,-0.2 5,-0.5 0.874 122.9 67.2 -86.6 -41.7 10.6 -6.8 1.3 55 78 A G H X5S+ 0 0 0 -4,-1.8 4,-0.8 -5,-0.5 -3,-0.2 0.826 110.6 41.0 -47.4 -30.8 8.6 -3.8 -0.0 56 79 A E H X5S+ 0 0 78 -4,-1.6 4,-3.3 2,-0.2 -1,-0.2 0.904 110.2 56.0 -82.6 -46.7 8.9 -5.7 -3.3 57 80 A L H X5S+ 0 0 85 -4,-1.2 4,-1.9 -5,-0.4 -2,-0.2 0.938 113.2 42.0 -49.8 -51.8 8.2 -9.1 -1.8 58 81 A V H X5S+ 0 0 7 -4,-3.3 4,-1.0 1,-0.2 -1,-0.3 0.866 112.3 57.6 -63.4 -36.1 5.0 -7.8 -0.4 59 82 A A H >X S+ 0 0 208 -64,-0.4 3,-0.7 3,-0.0 -63,-0.1 0.525 127.7 58.3-138.1 -39.8 1.0 10.3 -3.5 75 98 A G T 3 S+ 0 0 30 -65,-0.6 8,-0.1 1,-0.2 -66,-0.1 0.281 93.2 73.6 -82.9 12.7 4.7 10.3 -2.5 76 99 A G T 3 S+ 0 0 0 10,-0.1 3,-0.4 11,-0.1 -1,-0.2 0.763 72.6 175.1 -94.1 -29.2 5.5 7.6 -5.1 77 100 A Y < - 0 0 78 -3,-0.7 -5,-0.1 1,-0.2 -2,-0.1 0.202 61.8 -50.0 46.8-176.6 5.3 9.9 -8.1 78 101 A L S S- 0 0 149 1,-0.1 -1,-0.2 -6,-0.0 -2,-0.0 0.643 96.7-100.0 -61.4 -14.2 6.1 8.6 -11.6 79 102 A Y S S+ 0 0 30 -3,-0.4 -1,-0.1 12,-0.0 -2,-0.1 0.471 82.4 114.9 94.5 125.6 9.3 7.3 -10.0 80 103 A H + 0 0 159 -4,-0.2 -3,-0.1 -3,-0.1 -4,-0.0 0.070 69.3 59.0 175.0 -34.8 12.8 8.8 -10.1 81 104 A G S S- 0 0 19 -5,-0.2 4,-0.2 0, 0.0 -5,-0.0 0.430 104.1 -72.0 -87.1-135.3 13.6 9.8 -6.5 82 105 A R S > S+ 0 0 147 2,-0.1 3,-2.1 1,-0.1 4,-0.4 0.911 124.0 52.4 -92.1 -58.7 13.8 7.5 -3.5 83 106 A V T >> S+ 0 0 5 1,-0.3 4,-1.4 2,-0.2 3,-0.7 0.723 93.7 80.3 -51.2 -23.1 10.2 6.6 -2.6 84 107 A K H 3> S+ 0 0 44 1,-0.2 4,-2.9 2,-0.2 -1,-0.3 0.864 77.6 67.5 -54.4 -40.4 10.0 5.5 -6.2 85 108 A A H <> S+ 0 0 3 -3,-2.1 4,-3.6 2,-0.2 -1,-0.2 0.901 101.7 47.7 -48.2 -47.4 11.7 2.2 -5.5 86 109 A L H <> S+ 0 0 1 -3,-0.7 4,-1.5 -4,-0.4 5,-0.2 0.988 120.5 34.5 -58.2 -63.0 8.7 1.1 -3.4 87 110 A A H X S+ 0 0 0 -4,-1.4 4,-1.3 1,-0.2 -1,-0.2 0.705 118.4 58.7 -65.0 -18.5 6.1 2.0 -6.0 88 111 A D H X>S+ 0 0 39 -4,-2.9 4,-3.5 -5,-0.3 5,-0.6 0.936 96.8 56.5 -75.6 -50.4 8.7 1.0 -8.6 89 112 A A H X5S+ 0 0 4 -4,-3.6 4,-1.2 1,-0.3 -2,-0.2 0.914 117.7 37.0 -47.4 -45.3 9.1 -2.6 -7.3 90 113 A A H X5S+ 0 0 0 -4,-1.5 4,-1.1 -5,-0.2 -1,-0.3 0.829 116.7 56.4 -74.9 -33.3 5.4 -2.9 -7.9 91 114 A R H >X5S+ 0 0 116 -4,-1.3 3,-1.5 -7,-0.2 4,-1.3 0.986 109.4 41.1 -61.0 -62.5 5.6 -0.7 -11.0 92 115 A E H 3<5S+ 0 0 157 -4,-3.5 -1,-0.2 1,-0.3 -2,-0.2 0.827 112.0 58.9 -56.4 -32.7 8.2 -2.8 -12.8 93 116 A A H 3<