==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 13-FEB-07 2OV6 . COMPND 2 MOLECULE: V-TYPE ATP SYNTHASE SUBUNIT F; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; . AUTHOR S.GAYEN,V.SUBRAMANIAN,G.BIUKOVIC . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8268.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 74 73.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 15 14.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 15.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 27.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 181 0, 0.0 45,-0.3 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 151.9 2.1 -0.0 -1.2 2 2 A E - 0 0 101 43,-0.5 45,-2.2 40,-0.1 2,-0.7 -0.545 360.0-115.3-102.3 169.7 0.9 0.7 -4.8 3 3 A L E +a 47 0A 70 -2,-0.2 19,-2.0 43,-0.2 2,-0.5 -0.893 33.4 178.5-111.0 105.6 0.8 -1.5 -7.9 4 4 A A E +ab 48 22A 2 43,-2.4 45,-1.7 -2,-0.7 2,-0.3 -0.924 4.5 171.7-110.8 123.3 3.0 -0.2 -10.7 5 5 A V E -ab 49 23A 4 17,-3.0 19,-2.2 -2,-0.5 2,-0.4 -0.967 18.1-161.8-131.2 146.8 3.3 -2.2 -13.9 6 6 A I E +ab 50 24A 5 43,-2.7 45,-1.5 -2,-0.3 19,-0.2 -0.887 45.9 96.1-132.0 102.6 4.9 -1.5 -17.3 7 7 A G E S- b 0 25A 5 17,-1.7 19,-3.2 -2,-0.4 2,-0.1 -0.214 70.9 -30.6-145.3-122.9 3.8 -3.5 -20.3 8 8 A K > - 0 0 126 17,-0.3 4,-0.9 -2,-0.1 -1,-0.3 -0.408 54.7-104.5-104.1-177.5 1.4 -3.2 -23.2 9 9 A S H >> S+ 0 0 53 2,-0.2 4,-1.9 1,-0.2 3,-1.0 0.956 117.7 55.2 -72.9 -53.0 -2.0 -1.4 -23.6 10 10 A E H 3> S+ 0 0 147 1,-0.3 4,-1.0 2,-0.2 -1,-0.2 0.747 103.4 61.8 -52.3 -23.4 -4.2 -4.6 -23.4 11 11 A F H 3> S+ 0 0 65 2,-0.2 4,-1.4 1,-0.2 3,-0.3 0.915 104.5 43.7 -70.5 -44.6 -2.4 -5.2 -20.1 12 12 A V H X>S+ 0 0 81 -4,-1.4 4,-2.3 1,-0.2 3,-1.1 0.860 105.6 69.7 -74.5 -37.0 -6.3 -4.4 -14.6 16 16 A R H 3<5S+ 0 0 179 -4,-3.2 -1,-0.2 1,-0.3 -2,-0.2 0.794 90.1 66.2 -50.7 -29.4 -8.1 -1.0 -15.2 17 17 A L H 3<5S+ 0 0 157 -4,-0.6 -1,-0.3 -3,-0.4 -2,-0.2 0.927 111.8 30.3 -59.5 -47.2 -11.3 -3.0 -14.8 18 18 A A H <<5S- 0 0 73 -3,-1.1 -1,-0.2 -4,-0.5 -2,-0.2 0.675 96.1-143.5 -85.4 -19.6 -10.6 -3.7 -11.2 19 19 A G T <5S+ 0 0 53 -4,-2.3 -3,-0.2 2,-0.2 3,-0.1 0.619 71.4 111.8 65.9 10.9 -8.7 -0.4 -10.8 20 20 A I < + 0 0 134 -5,-0.7 2,-0.1 1,-0.2 -1,-0.1 -0.276 68.8 50.0-109.2 45.2 -6.4 -2.3 -8.4 21 21 A S - 0 0 20 -6,-0.1 2,-0.8 -9,-0.1 -2,-0.2 -0.534 68.1-146.0 178.1 108.9 -3.3 -2.3 -10.6 22 22 A K E +b 4 0A 134 -19,-2.0 -17,-3.0 -2,-0.1 2,-0.4 -0.736 29.3 174.5 -86.7 108.0 -1.7 0.6 -12.4 23 23 A V E -b 5 0A 16 -2,-0.8 -17,-0.2 -19,-0.2 2,-0.2 -0.896 14.3-153.4-116.8 145.2 -0.2 -0.6 -15.6 24 24 A Y E -b 6 0A 70 -19,-2.2 -17,-1.7 -2,-0.4 2,-0.4 -0.526 12.0-128.8-107.8 176.5 1.5 1.3 -18.4 25 25 A E E +b 7 0A 103 -2,-0.2 -17,-0.3 -19,-0.2 -16,-0.1 -0.921 24.6 171.1-133.7 108.4 1.9 0.8 -22.2 26 26 A T + 0 0 4 -19,-3.2 6,-0.1 -2,-0.4 -18,-0.0 -0.748 9.7 159.0-119.2 83.6 5.4 1.0 -23.8 27 27 A P + 0 0 74 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 0.880 65.5 56.7 -69.8 -40.0 5.1 -0.2 -27.4 28 28 A D S > S- 0 0 91 1,-0.1 4,-0.9 2,-0.0 26,-0.0 -0.691 78.6-135.2 -96.2 148.6 8.3 1.6 -28.5 29 29 A I T 4 S+ 0 0 68 -2,-0.3 4,-0.4 1,-0.2 3,-0.3 0.905 108.1 44.6 -65.9 -42.7 11.7 1.1 -26.9 30 30 A P T >4 S+ 0 0 71 0, 0.0 3,-1.3 0, 0.0 4,-0.3 0.866 107.5 57.9 -69.8 -38.0 12.4 4.9 -26.9 31 31 A A T >> S+ 0 0 35 1,-0.3 3,-2.0 2,-0.2 4,-0.8 0.759 87.5 79.2 -64.3 -24.5 8.9 5.7 -25.6 32 32 A T H 3X S+ 0 0 8 -4,-0.9 4,-1.9 1,-0.3 3,-0.4 0.845 80.7 66.6 -52.0 -36.2 9.6 3.5 -22.6 33 33 A E H <> S+ 0 0 134 -3,-1.3 4,-1.3 -4,-0.4 -1,-0.3 0.818 92.2 63.1 -55.7 -31.6 11.6 6.4 -21.1 34 34 A S H X> S+ 0 0 71 -3,-2.0 4,-0.7 -4,-0.3 3,-0.6 0.946 106.6 40.5 -59.3 -51.2 8.4 8.3 -20.8 35 35 A A H >X S+ 0 0 12 -4,-0.8 4,-1.0 -3,-0.4 3,-0.6 0.814 108.7 62.6 -67.8 -30.8 6.9 5.8 -18.3 36 36 A V H 3X S+ 0 0 61 -4,-1.9 4,-1.9 1,-0.2 -1,-0.2 0.791 94.5 62.4 -64.9 -28.0 10.3 5.5 -16.6 37 37 A R H << S+ 0 0 164 -4,-1.3 -1,-0.2 -3,-0.6 4,-0.2 0.843 108.5 40.7 -66.3 -34.1 10.0 9.2 -15.7 38 38 A S H 4 S+ 0 0 141 -4,-0.2 3,-0.5 -3,-0.2 -1,-0.2 0.680 120.8 53.5-108.2 -29.5 9.3 8.4 -8.2 42 42 A D H 3< S+ 0 0 33 -4,-1.0 3,-0.5 1,-0.2 4,-0.4 0.275 90.3 82.3 -89.4 10.6 6.6 5.7 -8.1 43 43 A K T 3< S+ 0 0 67 -4,-1.0 30,-0.5 1,-0.2 3,-0.3 0.806 92.5 44.3 -82.7 -32.2 9.3 3.1 -7.6 44 44 A S S < S+ 0 0 111 -3,-0.5 -1,-0.2 1,-0.2 -2,-0.1 0.023 99.3 76.5-100.3 25.9 9.6 3.6 -3.9 45 45 A V S S- 0 0 52 -3,-0.5 -43,-0.5 1,-0.1 2,-0.2 0.690 112.0 -52.1-104.6 -28.2 5.9 3.7 -3.4 46 46 A G S S- 0 0 18 -4,-0.4 2,-0.5 -45,-0.3 27,-0.4 -0.682 90.3 -17.2-171.1-132.9 5.2 -0.0 -3.7 47 47 A I E -a 3 0A 62 -45,-2.2 -43,-2.4 -2,-0.2 2,-0.3 -0.874 52.8-157.6-105.3 130.5 5.8 -3.0 -5.9 48 48 A L E -ac 4 74A 2 25,-1.3 27,-2.5 -2,-0.5 2,-0.3 -0.767 10.0-178.2-105.8 151.2 7.0 -2.5 -9.6 49 49 A V E +ac 5 75A 25 -45,-1.7 -43,-2.7 -2,-0.3 2,-0.2 -0.890 4.5 173.8-152.9 117.4 6.6 -4.9 -12.4 50 50 A M E -ac 6 76A 15 25,-1.3 27,-2.2 -2,-0.3 2,-0.6 -0.690 31.1-113.2-117.8 171.7 7.8 -4.6 -16.0 51 51 A H E >> - c 0 77A 17 -45,-1.5 3,-2.1 25,-0.3 4,-1.5 -0.930 7.5-152.0-112.1 118.7 8.0 -6.8 -19.1 52 52 A N H 3> S+ 0 0 16 25,-2.4 4,-1.9 -2,-0.6 5,-0.2 0.655 88.4 86.5 -59.4 -13.6 11.4 -7.8 -20.4 53 53 A D H 34 S+ 0 0 132 24,-0.5 -1,-0.3 1,-0.2 25,-0.1 0.599 109.7 17.5 -63.4 -9.1 9.6 -8.0 -23.8 54 54 A D H <4 S+ 0 0 31 -3,-2.1 3,-0.4 4,-0.0 -2,-0.2 0.543 123.7 57.1-131.3 -30.8 10.4 -4.3 -24.1 55 55 A I H >< S+ 0 0 6 -4,-1.5 3,-3.0 1,-0.2 8,-0.4 0.884 93.3 68.5 -73.1 -40.0 13.1 -3.7 -21.5 56 56 A G T 3< S+ 0 0 32 -4,-1.9 -1,-0.2 1,-0.3 -3,-0.1 0.774 82.0 77.5 -50.0 -27.5 15.4 -6.3 -23.0 57 57 A N T 3 S+ 0 0 94 -3,-0.4 -1,-0.3 1,-0.3 -2,-0.2 0.780 95.7 49.8 -54.5 -27.0 15.7 -3.9 -26.0 58 58 A L <>> + 0 0 26 -3,-3.0 5,-3.0 -4,-0.2 4,-1.5 -0.675 69.4 147.7-116.6 76.2 18.1 -1.9 -23.7 59 59 A P T 4>S+ 0 0 64 0, 0.0 5,-2.6 0, 0.0 6,-0.3 0.991 80.8 22.1 -69.7 -79.8 20.6 -4.5 -22.4 60 60 A E T 45S+ 0 0 147 3,-0.2 -2,-0.1 1,-0.2 0, 0.0 0.602 133.1 49.2 -66.3 -9.7 23.9 -2.6 -21.9 61 61 A V T 45S+ 0 0 88 3,-0.1 4,-0.4 -4,-0.0 -1,-0.2 0.897 134.4 0.0 -93.3 -56.1 21.8 0.5 -21.8 62 62 A L T X>S+ 0 0 45 -4,-1.5 4,-3.1 -7,-0.2 5,-0.6 0.873 131.8 51.1 -98.5 -65.9 19.1 -0.3 -19.3 63 63 A R H >>5S+ 0 0 87 -4,-0.4 4,-1.8 -6,-0.3 3,-1.4 0.958 118.5 44.3 -64.6 -52.7 22.2 0.6 -15.6 66 66 A L H 3X5S+ 0 0 50 -4,-3.1 4,-0.8 1,-0.3 -1,-0.2 0.787 95.2 80.9 -62.9 -27.3 19.5 -1.0 -13.6 67 67 A N H 3< + 0 0 40 -2,-0.4 2,-2.2 -27,-0.2 3,-0.6 -0.728 69.4 117.6 97.0-144.3 10.3 -12.9 -19.4 79 79 A G T 3 S+ 0 0 65 -2,-0.3 -2,-0.1 1,-0.3 -1,-0.1 -0.473 100.0 9.7 78.5 -74.1 14.0 -12.7 -20.3 80 80 A S T 3 S+ 0 0 113 -2,-2.2 2,-1.5 1,-0.1 -1,-0.3 0.846 74.6 147.2-101.1 -70.5 15.0 -16.1 -19.1 81 81 A G S < S- 0 0 72 -3,-0.6 2,-0.3 1,-0.1 -1,-0.1 -0.518 79.1 -14.4 71.3 -92.2 11.9 -18.1 -18.2 82 82 A S S S+ 0 0 119 -2,-1.5 2,-0.2 2,-0.0 -1,-0.1 -0.799 89.6 117.2-151.0 102.9 13.1 -21.7 -19.1 83 83 A G - 0 0 78 -2,-0.3 2,-0.2 1,-0.0 -3,-0.0 -0.549 46.1-107.9-140.9-153.9 16.1 -22.3 -21.3 84 84 A S - 0 0 115 -2,-0.2 2,-0.2 1,-0.0 -2,-0.0 -0.677 17.0-144.8-135.4-170.9 19.6 -24.0 -21.3 85 85 A T - 0 0 138 -2,-0.2 2,-0.3 0, 0.0 -1,-0.0 -0.460 12.0-129.1-136.7-151.4 23.3 -23.1 -21.3 86 86 A S - 0 0 108 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.877 9.1-148.6-156.1-174.1 26.6 -24.3 -22.6 87 87 A L - 0 0 156 -2,-0.3 2,-0.2 2,-0.0 0, 0.0 -0.890 5.8-165.2-153.8-177.9 30.2 -25.3 -21.8 88 88 A R - 0 0 203 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.864 2.5-158.3-158.1-170.1 33.8 -25.4 -23.1 89 89 A E - 0 0 168 -2,-0.2 2,-0.2 0, 0.0 -2,-0.0 -0.975 7.7-136.8-170.1 174.0 37.3 -26.8 -22.5 90 90 A K - 0 0 156 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.623 23.2-119.2-130.9-170.1 41.0 -26.3 -23.2 91 91 A I - 0 0 113 -2,-0.2 2,-2.8 1,-0.1 -1,-0.1 0.674 27.5-163.7-106.9 -27.5 44.0 -28.3 -24.1 92 92 A K S > S+ 0 0 141 1,-0.2 3,-2.9 3,-0.0 4,-0.3 -0.317 79.3 77.7 74.7 -59.7 46.2 -27.7 -21.1 93 93 A Q G > S+ 0 0 159 -2,-2.8 3,-2.9 1,-0.3 4,-0.2 0.792 75.8 78.5 -49.8 -29.5 49.3 -28.9 -22.9 94 94 A A G > S+ 0 0 47 1,-0.3 3,-2.5 2,-0.2 4,-0.3 0.803 75.2 75.5 -50.6 -30.8 49.2 -25.5 -24.6 95 95 A V G X> S+ 0 0 100 -3,-2.9 3,-2.3 1,-0.3 4,-0.6 0.783 74.9 79.4 -53.4 -27.7 50.8 -24.1 -21.4 96 96 A G H X> S+ 0 0 41 -3,-2.9 3,-1.2 1,-0.3 4,-1.0 0.781 80.2 67.5 -52.2 -27.9 54.0 -25.7 -22.5 97 97 A V H <> S+ 0 0 86 -3,-2.5 4,-1.6 1,-0.3 -1,-0.3 0.810 91.7 60.0 -63.2 -30.2 54.4 -22.7 -24.8 98 98 A D H <4 S+ 0 0 112 -3,-2.3 -1,-0.3 -4,-0.3 -2,-0.2 0.704 97.2 62.8 -70.6 -19.5 54.9 -20.5 -21.7 99 99 A L H << S+ 0 0 160 -3,-1.2 -1,-0.2 -4,-0.6 -2,-0.2 0.952 108.8 36.5 -70.2 -51.3 57.9 -22.6 -20.8 100 100 A W H < 0 0 211 -4,-1.0 -2,-0.2 -3,-0.0 -1,-0.2 0.789 360.0 360.0 -71.9 -28.3 59.9 -21.7 -23.9 101 101 A K < 0 0 175 -4,-1.6 -3,-0.0 -5,-0.2 0, 0.0 -0.377 360.0 360.0 -67.1 360.0 58.6 -18.2 -23.8