==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-OCT-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN FIBRIL 17-SEP-10 3OW9 . COMPND 2 MOLECULE: KLVFFA HEXAPEPTIDE SEGMENT FROM AMYLOID BETA; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.LANDAU,D.EISENBERG . 12 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1470.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 41.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 41.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 211 0, 0.0 2,-0.3 0, 0.0 12,-0.3 0.000 360.0 360.0 360.0 163.7 7.5 -0.6 4.3 2 2 A L E -A 12 0A 73 10,-2.6 10,-2.0 2,-0.0 2,-0.4 -0.985 360.0-171.9-146.2 133.0 3.7 -0.2 3.9 3 3 A V E +A 11 0A 104 -2,-0.3 2,-0.4 8,-0.2 8,-0.2 -0.997 12.7 179.0-122.0 127.4 0.7 -0.4 6.4 4 4 A F E +A 10 0A 92 6,-2.9 6,-2.4 -2,-0.4 2,-0.4 -0.991 6.2 177.8-129.7 136.6 -2.8 -0.2 5.0 5 5 A F E A 9 0A 159 -2,-0.4 4,-0.2 4,-0.2 -2,-0.0 -0.980 360.0 360.0-140.7 124.4 -6.1 -0.5 6.9 6 6 A A 0 0 86 2,-2.5 -2,-0.0 -2,-0.4 0, 0.0 -0.991 360.0 360.0-130.0 360.0 -9.6 -0.1 5.4 7 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 8 1 B K 0 0 163 0, 0.0 -2,-2.5 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 127.3 -8.9 -5.2 5.5 9 2 B L E +A 5 0A 122 -4,-0.2 2,-0.4 2,-0.0 -4,-0.2 -0.995 360.0 175.0-128.9 122.9 -5.3 -5.0 6.9 10 3 B V E +A 4 0A 61 -6,-2.4 -6,-2.9 -2,-0.4 2,-0.3 -0.997 1.3 172.2-130.4 131.8 -2.2 -5.3 4.7 11 4 B F E +A 3 0A 138 -2,-0.4 2,-0.3 -8,-0.2 -8,-0.2 -0.999 5.5 163.7-135.8 136.9 1.4 -4.9 5.8 12 5 B F E A 2 0A 123 -10,-2.0 -10,-2.6 -2,-0.3 -2,-0.0 -0.982 360.0 360.0-150.6 158.9 4.7 -5.4 3.8 13 6 B A 0 0 138 -2,-0.3 -2,-0.0 -12,-0.3 0, 0.0 -0.863 360.0 360.0-166.8 360.0 8.4 -4.7 3.9