==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGAND BINDING PROTEIN 21-FEB-07 2OY3 . COMPND 2 MOLECULE: MACROPHAGE RECEPTOR MARCO; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR J.R.M.OJALA,T.PIKKARAINEN,A.TUUTTILA,T.SANDALOVA, . 98 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5195.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 64.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 24.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 421 A Q 0 0 141 0, 0.0 2,-0.4 0, 0.0 73,-0.1 0.000 360.0 360.0 360.0 73.6 9.3 7.1 5.3 2 422 A R + 0 0 170 15,-0.5 15,-3.1 2,-0.0 2,-0.3 -0.751 360.0 171.9-102.6 135.3 8.3 8.2 8.9 3 423 A V E -A 16 0A 10 -2,-0.4 2,-0.3 13,-0.2 13,-0.2 -0.917 4.8-176.3-132.5 158.5 7.1 6.0 11.7 4 424 A R E -A 15 0A 85 11,-2.6 11,-2.7 -2,-0.3 2,-0.5 -0.989 23.7-128.5-153.0 159.1 6.3 6.6 15.4 5 425 A I E -A 14 0A 33 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.947 23.6-167.7-110.2 126.4 5.2 4.7 18.6 6 426 A M E +A 13 0A 68 7,-2.3 7,-3.4 -2,-0.5 2,-0.3 -0.971 59.3 37.2-120.6 120.8 2.3 6.2 20.5 7 427 A G E S+A 12 0A 63 -2,-0.5 5,-0.2 1,-0.3 2,-0.1 -0.753 107.9 2.4 146.9 -91.7 1.5 4.9 24.0 8 428 A G S S- 0 0 41 3,-2.1 -1,-0.3 -2,-0.3 -3,-0.1 -0.094 79.2 -88.1-112.1-154.0 4.4 4.1 26.3 9 429 A T S S+ 0 0 116 -3,-0.1 -4,-0.1 -2,-0.1 -1,-0.1 0.956 117.4 9.7 -87.6 -68.4 8.2 4.1 26.1 10 430 A N S S+ 0 0 80 86,-0.1 87,-2.6 -3,-0.0 2,-0.3 0.289 133.9 46.1 -96.7 8.2 9.3 0.8 24.6 11 431 A R E + B 0 96A 135 85,-0.3 -3,-2.1 -6,-0.1 2,-0.3 -0.987 66.4 106.9-145.6 156.4 5.7 -0.2 23.6 12 432 A G E -AB 7 95A 0 83,-1.9 83,-2.5 -2,-0.3 -5,-0.3 -0.940 66.7 -39.8 159.8-177.8 2.8 1.5 22.0 13 433 A R E -AB 6 94A 34 -7,-3.4 -7,-2.3 -2,-0.3 2,-0.7 -0.499 56.4-122.1 -77.5 136.9 0.6 1.7 18.9 14 434 A A E -A 5 0A 0 79,-2.4 11,-0.6 -9,-0.2 2,-0.3 -0.772 35.4-176.2 -82.4 113.0 2.5 1.5 15.6 15 435 A E E -AC 4 24A 10 -11,-2.7 -11,-2.6 -2,-0.7 2,-0.4 -0.889 8.9-162.1-115.4 147.7 1.8 4.7 13.5 16 436 A V E -AC 3 23A 0 7,-2.2 7,-2.8 -2,-0.3 2,-0.7 -0.959 17.3-130.4-130.6 137.6 3.0 5.5 10.0 17 437 A Y E + C 0 22A 96 -15,-3.1 -15,-0.5 -2,-0.4 2,-0.3 -0.808 47.8 135.8 -94.8 117.5 3.2 8.8 8.1 18 438 A Y E > + C 0 21A 80 3,-2.7 3,-2.0 -2,-0.7 -2,-0.1 -0.993 56.5 20.9-157.6 152.6 1.6 8.7 4.7 19 439 A N T 3 S- 0 0 89 -2,-0.3 -1,-0.1 1,-0.3 3,-0.1 0.914 130.3 -59.5 49.3 43.9 -0.7 10.7 2.5 20 440 A N T 3 S+ 0 0 126 1,-0.1 2,-0.3 -3,-0.1 -1,-0.3 0.485 120.0 86.3 66.2 9.4 0.1 13.8 4.6 21 441 A E E < S-C 18 0A 81 -3,-2.0 -3,-2.7 -5,-0.1 2,-0.6 -0.977 80.2-113.7-140.5 149.5 -1.1 12.3 7.9 22 442 A W E +C 17 0A 75 -2,-0.3 37,-0.4 -5,-0.2 2,-0.3 -0.748 50.0 173.2 -75.9 122.9 -0.1 10.1 10.8 23 443 A G E -C 16 0A 0 -7,-2.8 -7,-2.2 -2,-0.6 37,-0.2 -0.782 24.1-111.0-127.5 175.0 -2.2 7.0 10.4 24 444 A T E -Cd 15 60A 0 35,-2.4 37,-2.3 -2,-0.3 38,-1.4 -0.428 16.7-123.3-107.5 179.7 -2.5 3.6 12.0 25 445 A I E - d 0 62A 0 -11,-0.6 68,-3.6 68,-0.3 38,-0.2 -0.965 22.9-130.4-127.6 115.2 -1.8 -0.1 11.0 26 446 A a B -F 92 0B 1 36,-3.2 39,-0.4 -2,-0.5 38,-0.2 -0.379 16.2-132.4 -65.0 144.8 -4.5 -2.7 11.2 27 447 A D > + 0 0 22 64,-1.9 3,-2.2 36,-0.1 2,-0.3 0.405 58.7 133.2 -85.9 -0.4 -3.4 -5.8 13.1 28 448 A D T 3 S- 0 0 56 1,-0.3 36,-0.7 63,-0.1 37,-0.4 -0.405 95.2 -13.0 -55.2 109.1 -4.7 -8.4 10.5 29 449 A D T 3 S+ 0 0 109 -2,-0.3 2,-0.5 1,-0.2 -1,-0.3 0.549 93.9 154.2 71.3 14.4 -1.6 -10.7 10.3 30 450 A W < + 0 0 16 -3,-2.2 -1,-0.2 4,-0.1 2,-0.2 -0.598 20.9 164.2 -71.8 118.3 0.6 -8.3 12.1 31 451 A D >> - 0 0 70 -2,-0.5 4,-2.6 34,-0.2 3,-0.5 -0.712 53.3 -79.1-131.2-175.4 3.4 -10.4 13.6 32 452 A N H 3> S+ 0 0 88 1,-0.3 4,-2.7 2,-0.2 15,-0.3 0.808 124.4 57.4 -57.3 -35.4 6.8 -10.3 15.2 33 453 A N H 3> S+ 0 0 75 2,-0.2 4,-2.1 1,-0.2 -1,-0.3 0.929 111.6 42.4 -60.2 -43.8 8.5 -10.0 11.8 34 454 A D H <> S+ 0 0 1 -3,-0.5 4,-2.6 2,-0.2 -2,-0.2 0.915 114.8 49.7 -66.1 -46.5 6.5 -6.9 11.1 35 455 A A H X S+ 0 0 0 -4,-2.6 4,-2.8 1,-0.2 -2,-0.2 0.862 109.7 53.4 -62.4 -36.3 7.0 -5.5 14.6 36 456 A T H X S+ 0 0 26 -4,-2.7 4,-2.3 11,-0.4 -2,-0.2 0.949 109.6 45.8 -64.1 -50.0 10.8 -6.2 14.2 37 457 A V H X S+ 0 0 1 -4,-2.1 4,-1.1 2,-0.2 -2,-0.2 0.934 115.9 48.3 -53.4 -47.9 11.0 -4.2 10.9 38 458 A F H >< S+ 0 0 0 -4,-2.6 3,-0.6 1,-0.2 4,-0.5 0.929 112.2 46.4 -62.4 -50.8 9.0 -1.4 12.5 39 459 A b H ><>S+ 0 0 0 -4,-2.8 5,-2.2 1,-0.2 3,-1.1 0.846 106.7 59.2 -59.4 -38.8 11.0 -1.2 15.8 40 460 A R H ><5S+ 0 0 137 -4,-2.3 3,-1.2 1,-0.3 -1,-0.2 0.784 96.8 61.6 -65.2 -26.0 14.3 -1.3 13.8 41 461 A M T <<5S+ 0 0 48 -4,-1.1 -1,-0.3 -3,-0.6 -2,-0.2 0.724 105.4 48.9 -69.1 -19.5 13.2 2.0 12.0 42 462 A L T < 5S- 0 0 69 -3,-1.1 -1,-0.2 -4,-0.5 -2,-0.2 0.145 128.6 -94.6-108.1 17.4 13.2 3.6 15.4 43 463 A G T < 5S+ 0 0 74 -3,-1.2 -3,-0.2 1,-0.3 2,-0.2 0.598 86.4 122.1 86.1 9.8 16.6 2.4 16.5 44 464 A Y < - 0 0 58 -5,-2.2 -1,-0.3 -6,-0.1 3,-0.1 -0.517 61.7-132.6 -87.3 169.7 15.6 -0.7 18.4 45 465 A S S S- 0 0 58 53,-1.9 2,-0.3 1,-0.2 -5,-0.2 0.759 77.0 -6.8 -89.0 -30.4 16.9 -4.2 17.4 46 466 A R - 0 0 131 52,-1.7 52,-2.1 -7,-0.1 2,-0.3 -0.944 58.5-147.4-160.3 165.7 13.7 -6.2 17.4 47 467 A G E -E 97 0A 8 -15,-0.3 2,-0.4 -2,-0.3 -11,-0.4 -0.996 11.6-138.7-146.2 151.3 9.9 -6.1 18.2 48 468 A R E -E 96 0A 122 48,-2.4 48,-1.9 -2,-0.3 2,-0.2 -0.928 36.8-114.3-102.5 132.1 7.1 -8.3 19.5 49 469 A A E -E 95 0A 18 -2,-0.4 2,-0.6 46,-0.2 46,-0.2 -0.471 22.3-155.6 -63.1 131.4 3.7 -7.7 17.7 50 470 A L E > -E 94 0A 21 44,-2.6 44,-2.7 -2,-0.2 3,-0.6 -0.961 11.8-149.9-109.2 115.6 0.9 -6.3 19.8 51 471 A S T 3 S- 0 0 92 -2,-0.6 41,-0.1 1,-0.2 42,-0.1 -0.717 74.2 -0.3 -87.0 138.8 -2.4 -7.3 18.4 52 472 A S T 3 + 0 0 63 39,-0.5 -1,-0.2 -2,-0.4 41,-0.2 0.899 69.8 157.6 48.7 52.2 -5.3 -4.9 19.0 53 473 A Y < + 0 0 83 39,-1.8 40,-0.2 -3,-0.6 38,-0.1 0.853 34.2 177.5 -65.3 -37.0 -3.3 -2.3 20.9 54 474 A G + 0 0 7 38,-2.1 36,-0.2 35,-0.1 -41,-0.1 0.001 36.9 106.1 74.1-173.2 -6.1 0.1 19.8 55 475 A G + 0 0 63 1,-0.2 35,-0.1 -3,-0.0 -1,-0.1 0.413 50.2 123.9 86.5 0.9 -6.6 3.8 20.6 56 476 A G - 0 0 12 33,-0.6 2,-0.3 2,-0.0 -1,-0.2 -0.275 38.5-162.5 -83.2 176.0 -5.7 5.5 17.4 57 477 A S + 0 0 97 2,-0.1 2,-0.2 -2,-0.1 -33,-0.1 -0.919 46.8 34.0-149.7 175.7 -7.8 7.8 15.3 58 478 A G S S+ 0 0 58 -2,-0.3 2,-0.2 -35,-0.1 -35,-0.1 -0.528 103.7 8.7 75.1-142.7 -8.0 9.2 11.8 59 479 A N - 0 0 61 -37,-0.4 -35,-2.4 -2,-0.2 2,-0.7 -0.468 55.1-145.8 -77.7 139.9 -6.9 7.1 8.8 60 480 A I E +d 24 0A 8 -37,-0.2 -35,-0.2 -2,-0.2 27,-0.1 -0.954 25.3 179.3 -94.6 113.6 -6.0 3.4 9.0 61 481 A W E + 0 0 12 -37,-2.3 22,-3.0 -2,-0.7 23,-0.4 0.783 52.9 33.6 -92.9 -31.7 -3.2 3.4 6.4 62 482 A L E +d 25 0A 0 -38,-1.4 -36,-3.2 20,-0.2 2,-0.3 -0.929 52.3 171.1-129.2 153.7 -2.0 -0.3 6.4 63 483 A D + 0 0 5 -2,-0.3 17,-1.9 -38,-0.2 -36,-0.1 -0.959 65.9 22.8-152.8 152.8 -3.5 -3.7 6.8 64 484 A N S S- 0 0 35 -36,-0.7 2,-0.3 -2,-0.3 -35,-0.2 0.902 72.3-168.7 56.2 48.6 -2.1 -7.2 6.2 65 485 A V - 0 0 1 -37,-0.4 14,-0.3 -39,-0.4 -34,-0.2 -0.562 7.4-171.5 -70.6 133.6 1.5 -6.3 6.5 66 486 A N B +G 78 0C 58 12,-3.4 12,-0.7 -2,-0.3 2,-0.1 -0.451 13.3 167.2-131.5 57.0 3.8 -9.2 5.4 67 487 A c - 0 0 7 10,-0.2 -33,-0.2 1,-0.1 -34,-0.1 -0.453 36.6-142.4 -66.3 144.8 7.4 -8.4 6.2 68 488 A R - 0 0 169 -2,-0.1 -1,-0.1 -35,-0.1 -34,-0.1 0.776 45.4-114.6 -73.5 -27.0 10.0 -11.1 6.0 69 489 A G S S+ 0 0 15 -36,-0.1 -2,-0.1 -35,-0.1 8,-0.0 0.252 102.5 81.6 109.8 -6.9 11.6 -9.5 9.1 70 490 A T + 0 0 126 3,-0.1 -3,-0.0 -34,-0.0 -37,-0.0 0.550 60.9 119.0-104.8 -12.2 14.8 -8.6 7.3 71 491 A E - 0 0 29 1,-0.1 3,-0.1 3,-0.0 -4,-0.0 -0.090 58.5-143.5 -60.7 152.5 13.6 -5.3 5.6 72 492 A N S S+ 0 0 151 1,-0.2 2,-0.3 -31,-0.0 -1,-0.1 0.658 87.5 23.5 -85.1 -20.9 15.3 -1.9 6.3 73 493 A S S > S- 0 0 5 1,-0.1 3,-1.2 -32,-0.0 4,-0.3 -0.996 70.6-127.1-146.2 147.4 11.9 -0.2 6.0 74 494 A L G > S+ 0 0 0 -2,-0.3 3,-1.4 1,-0.2 -1,-0.1 0.780 109.7 68.2 -55.5 -31.9 8.2 -1.1 6.3 75 495 A W G 3 S+ 0 0 56 1,-0.3 -1,-0.2 -74,-0.1 4,-0.1 0.750 96.0 54.0 -64.3 -25.1 7.9 0.5 2.8 76 496 A D G < S+ 0 0 106 -3,-1.2 -1,-0.3 2,-0.1 2,-0.2 0.519 92.2 98.0 -83.8 -8.9 9.9 -2.5 1.4 77 497 A c S < S- 0 0 3 -3,-1.4 -10,-0.2 -4,-0.3 2,-0.1 -0.570 84.3-108.2 -82.6 144.1 7.5 -5.0 3.0 78 498 A S B +G 66 0C 59 -12,-0.7 -12,-3.4 -2,-0.2 2,-0.3 -0.463 59.3 144.1 -55.7 138.2 4.7 -6.7 1.2 79 499 A K - 0 0 48 -14,-0.3 -14,-0.2 -2,-0.1 -15,-0.2 -0.948 53.8 -73.6-169.7 161.6 1.4 -5.2 2.5 80 500 A N - 0 0 44 -17,-1.9 -17,-0.2 -2,-0.3 3,-0.1 -0.251 67.9 -82.1 -54.5 155.6 -2.1 -4.2 1.4 81 501 A S > - 0 0 88 1,-0.1 3,-2.1 -19,-0.1 -1,-0.1 -0.246 66.4 -77.0 -56.2 148.9 -2.3 -1.1 -0.8 82 502 A W T 3 S+ 0 0 61 1,-0.3 -20,-0.2 -3,-0.1 -1,-0.1 -0.246 117.5 8.3 -55.8 135.0 -2.4 2.2 1.4 83 503 A G T 3 S+ 0 0 35 -22,-3.0 2,-0.8 1,-0.2 -1,-0.3 0.546 93.9 127.5 66.5 9.8 -5.8 2.9 3.0 84 504 A N < + 0 0 93 -3,-2.1 2,-0.3 -23,-0.4 -1,-0.2 -0.862 35.6 121.2 -96.4 107.2 -7.1 -0.6 1.9 85 505 A H - 0 0 68 -2,-0.8 -22,-0.1 -3,-0.1 -25,-0.0 -0.984 57.6-146.5-157.6 160.8 -8.5 -2.2 5.1 86 506 A N + 0 0 151 -2,-0.3 2,-0.2 2,-0.1 -2,-0.0 -0.491 66.8 115.5-127.9 59.3 -11.6 -3.7 6.7 87 507 A a - 0 0 16 -27,-0.1 2,-0.3 -59,-0.0 -27,-0.1 -0.750 54.1-142.5-124.5 166.2 -10.7 -2.6 10.2 88 508 A V > - 0 0 80 -2,-0.2 3,-1.8 1,-0.0 -34,-0.1 -0.870 40.7-103.3-117.9 166.9 -11.6 -0.4 13.2 89 509 A H G > S+ 0 0 41 -2,-0.3 3,-2.0 1,-0.3 -33,-0.6 0.721 115.3 71.5 -66.5 -22.5 -9.2 1.5 15.5 90 510 A N G 3 S+ 0 0 124 1,-0.3 -1,-0.3 -36,-0.2 -36,-0.1 0.830 96.7 56.1 -53.6 -32.4 -9.6 -1.1 18.3 91 511 A E G < S+ 0 0 62 -3,-1.8 -64,-1.9 -38,-0.1 -39,-0.5 0.288 76.1 136.2 -86.4 4.4 -7.6 -3.3 15.9 92 512 A D B < -F 26 0B 0 -3,-2.0 -38,-2.1 -66,-0.2 -39,-1.8 -0.370 54.9-125.3 -54.9 122.6 -4.6 -0.8 15.6 93 513 A A - 0 0 0 -68,-3.6 -79,-2.4 -41,-0.2 -68,-0.3 -0.427 28.2-169.9 -67.8 148.6 -1.4 -2.8 15.9 94 514 A G E -BE 13 50A 0 -44,-2.7 -44,-2.6 -81,-0.3 2,-0.3 -0.716 9.1-140.1-128.2-178.2 1.3 -2.0 18.4 95 515 A V E -BE 12 49A 0 -83,-2.5 -83,-1.9 -46,-0.2 2,-0.5 -0.981 8.2-154.8-142.8 145.3 4.9 -3.1 19.1 96 516 A E E -BE 11 48A 66 -48,-1.9 -48,-2.4 -2,-0.3 -85,-0.3 -0.953 32.0-167.0-119.0 107.1 7.0 -3.9 22.1 97 517 A b E E 0 47A 7 -87,-2.6 -50,-0.2 -2,-0.5 -61,-0.1 -0.529 360.0 360.0 -95.7 158.5 10.5 -3.2 21.1 98 518 A S 0 0 88 -52,-2.1 -53,-1.9 -2,-0.2 -52,-1.7 -0.973 360.0 360.0-146.3 360.0 13.9 -4.0 22.6