==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFUNGAL PROTEIN 10-APR-03 1P00 . COMPND 2 MOLECULE: DEFENSIN ARD1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOPREPONA DEMOPHON; . AUTHOR C.LANDON,M.GUENNEUGUES,F.BARBAULT,M.LEGRAIN,L.MENIN, . 44 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3203.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 70.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 27.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 100 0, 0.0 2,-0.5 0, 0.0 42,-0.2 0.000 360.0 360.0 360.0 136.2 -0.6 9.6 -0.1 2 2 A K E -A 42 0A 103 40,-2.3 40,-3.4 2,-0.0 2,-0.6 -0.921 360.0-144.8-110.3 125.4 2.6 7.8 1.0 3 3 A L E +A 41 0A 68 -2,-0.5 38,-0.2 38,-0.2 3,-0.1 -0.758 30.0 159.4 -88.1 121.9 4.1 5.0 -1.1 4 4 A I E - 0 0 42 36,-1.3 2,-0.3 -2,-0.6 -1,-0.2 0.580 63.0 -52.3-115.1 -19.4 5.6 2.3 1.0 5 5 A G E -A 40 0A 2 35,-0.8 35,-1.7 10,-0.0 2,-0.4 -0.907 68.4 -58.5 177.6-148.9 5.7 -0.6 -1.4 6 6 A S E -Ab 39 14A 13 7,-2.7 9,-1.6 -2,-0.3 2,-0.4 -0.991 19.2-148.0-132.2 136.8 3.5 -2.6 -3.8 7 7 A a S S+ 0 0 20 31,-1.1 2,-0.4 -2,-0.4 32,-0.1 -0.211 70.8 104.0 -92.5 42.9 0.4 -4.6 -3.1 8 8 A V S > S- 0 0 51 -2,-0.4 3,-1.1 30,-0.3 2,-0.4 -0.990 77.0-116.7-129.3 131.7 1.4 -7.1 -5.9 9 9 A W T 3 S+ 0 0 215 -2,-0.4 3,-0.1 1,-0.2 -2,-0.1 -0.526 99.7 35.6 -68.8 119.4 2.8 -10.6 -5.3 10 10 A G T 3 S+ 0 0 63 1,-0.5 -1,-0.2 -2,-0.4 4,-0.0 -0.203 84.5 111.0 132.9 -43.1 6.3 -10.7 -6.8 11 11 A A S X S- 0 0 37 -3,-1.1 3,-1.0 1,-0.1 -1,-0.5 -0.293 77.1-118.4 -63.7 146.7 7.7 -7.2 -6.0 12 12 A V T 3 S+ 0 0 148 1,-0.3 -1,-0.1 -3,-0.1 -3,-0.1 0.003 112.3 48.8 -77.8 33.2 10.4 -6.9 -3.5 13 13 A N T 3 S+ 0 0 72 -2,-0.5 -7,-2.7 -5,-0.3 2,-0.3 -0.071 74.3 164.5-162.7 41.3 8.1 -4.8 -1.3 14 14 A Y B < -b 6 0A 108 -3,-1.0 2,-0.5 -9,-0.2 -7,-0.2 -0.517 29.7-139.8 -71.0 126.7 4.9 -6.7 -1.2 15 15 A T - 0 0 14 -9,-1.6 3,-0.4 -2,-0.3 -1,-0.1 -0.766 4.7-147.6 -91.1 129.3 2.5 -5.5 1.5 16 16 A S S S- 0 0 94 -2,-0.5 2,-0.3 1,-0.3 -1,-0.2 0.898 94.7 -1.3 -59.8 -39.0 0.6 -8.2 3.4 17 17 A N > - 0 0 87 1,-0.1 4,-3.2 -3,-0.1 5,-0.3 -0.817 67.5-155.7-156.6 105.8 -2.2 -5.7 3.8 18 18 A b H > S+ 0 0 12 -3,-0.4 4,-1.9 -2,-0.3 5,-0.2 0.908 96.4 40.8 -48.8 -54.4 -1.8 -2.2 2.3 19 19 A R H > S+ 0 0 167 11,-0.3 4,-2.3 2,-0.2 -1,-0.2 0.925 118.1 47.0 -64.0 -46.8 -4.4 -0.6 4.6 20 20 A A H > S+ 0 0 39 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.940 111.9 48.3 -61.8 -51.9 -3.2 -2.5 7.7 21 21 A E H X S+ 0 0 29 -4,-3.2 4,-1.9 1,-0.2 -1,-0.2 0.919 113.8 47.1 -57.0 -46.8 0.5 -1.9 7.3 22 22 A c H <>S+ 0 0 0 -4,-1.9 5,-1.3 -5,-0.3 -1,-0.2 0.922 110.5 52.4 -62.6 -43.3 0.1 1.8 6.7 23 23 A K H ><5S+ 0 0 117 -4,-2.3 3,-1.3 1,-0.2 4,-0.3 0.907 107.8 52.5 -58.6 -42.0 -2.3 2.1 9.7 24 24 A R H 3<5S+ 0 0 190 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.892 103.3 57.9 -59.6 -42.7 0.4 0.4 11.9 25 25 A R T 3<5S- 0 0 150 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.059 132.1 -90.4 -80.2 29.1 3.0 2.9 10.7 26 26 A G T < 5S+ 0 0 71 -3,-1.3 2,-0.3 1,-0.2 -3,-0.2 0.882 83.2 138.3 66.9 42.7 0.9 5.7 12.0 27 27 A Y < - 0 0 60 -5,-1.3 -1,-0.2 -4,-0.3 17,-0.2 -0.831 64.0-121.1-117.7 156.7 -1.2 6.4 8.9 28 28 A K S S- 0 0 169 15,-1.5 2,-0.3 -2,-0.3 16,-0.1 0.863 79.3 -67.4 -60.7 -37.1 -4.8 7.2 8.4 29 29 A G E -C 43 0A 2 14,-0.6 14,-1.1 -7,-0.1 2,-0.3 -0.881 51.1-108.2 179.2-146.4 -5.2 4.1 6.2 30 30 A G E -C 42 0A 10 12,-0.4 2,-0.4 -2,-0.3 12,-0.3 -0.899 13.3-156.8-175.0 143.7 -4.0 2.8 2.8 31 31 A H E -C 41 0A 70 10,-3.2 10,-2.8 -2,-0.3 2,-0.5 -0.992 14.2-138.7-132.9 138.4 -5.3 2.0 -0.6 32 32 A a E +C 40 0A 53 -2,-0.4 8,-0.2 8,-0.2 2,-0.2 -0.787 54.0 103.0 -93.5 129.3 -4.1 -0.4 -3.3 33 33 A G E > +C 39 0A 19 6,-2.8 5,-1.6 -2,-0.5 6,-1.3 -0.587 14.4 109.2-164.2-132.2 -4.3 1.0 -6.8 34 34 A S T > 5S+ 0 0 80 3,-0.2 2,-1.1 4,-0.2 3,-0.6 -0.450 96.0 4.4 70.0-141.0 -2.1 2.6 -9.6 35 35 A F T 3 5S- 0 0 181 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 -0.660 143.6 -28.5 -81.3 99.3 -1.6 0.3 -12.6 36 36 A A T 3 5S- 0 0 75 -2,-1.1 -1,-0.3 1,-0.2 -2,-0.1 0.958 118.4 -56.9 57.7 58.5 -3.8 -2.8 -11.9 37 37 A N T < 5S+ 0 0 101 -3,-0.6 -3,-0.2 -5,-0.1 -1,-0.2 0.859 102.4 130.1 40.9 52.8 -3.6 -2.5 -8.0 38 38 A V < + 0 0 41 -5,-1.6 -31,-1.1 1,-0.1 2,-0.4 0.838 54.1 59.2 -97.4 -44.0 0.2 -2.7 -8.1 39 39 A N E -AC 6 33A 44 -6,-1.3 -6,-2.8 -33,-0.3 2,-0.6 -0.739 69.4-147.7 -94.6 138.1 1.2 0.3 -5.9 40 40 A b E -AC 5 32A 0 -35,-1.7 -36,-1.3 -2,-0.4 -35,-0.8 -0.900 14.7-169.4-104.9 118.4 0.1 0.6 -2.3 41 41 A W E -AC 3 31A 89 -10,-2.8 -10,-3.2 -2,-0.6 -38,-0.2 -0.935 14.9-138.7-114.9 122.5 -0.5 4.2 -1.0 42 42 A c E -AC 2 30A 0 -40,-3.4 -40,-2.3 -2,-0.5 2,-0.4 -0.520 32.4-103.4 -75.1 138.6 -1.0 5.0 2.6 43 43 A E E C 0 29A 79 -14,-1.1 -15,-1.5 -2,-0.2 -14,-0.6 -0.492 360.0 360.0 -66.4 118.6 -3.7 7.5 3.4 44 44 A T 0 0 118 -2,-0.4 -17,-0.0 -17,-0.2 -14,-0.0 -0.934 360.0 360.0-171.5 360.0 -2.0 10.8 4.2