==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFUNGAL PROTEIN 10-APR-03 1P0A . COMPND 2 MOLECULE: DEFENSIN ARD1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOPREPONA DEMOPHON; . AUTHOR C.LANDON,M.GUENNEUGUES,F.BARBAULT,M.LEGRAIN,L.MENIN, . 44 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3189.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 28 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 20.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 80 0, 0.0 2,-0.4 0, 0.0 42,-0.2 0.000 360.0 360.0 360.0 140.5 5.5 -2.5 -4.1 2 2 A K E -A 42 0A 116 40,-1.3 40,-2.7 38,-0.0 2,-0.8 -0.949 360.0-130.0-117.6 132.4 2.2 -2.7 -6.0 3 3 A L E +A 41 0A 102 -2,-0.4 38,-0.2 38,-0.2 3,-0.1 -0.700 45.0 146.9 -82.0 109.4 -0.0 0.2 -6.7 4 4 A I E - 0 0 19 36,-1.8 2,-0.2 -2,-0.8 -1,-0.2 0.651 66.8 -34.7-113.2 -27.4 -3.6 -0.7 -5.7 5 5 A G E -A 40 0A 5 35,-0.8 35,-2.2 10,-0.1 2,-0.4 -0.782 67.9 -75.0-164.3-151.3 -4.9 2.6 -4.5 6 6 A S E -Ab 39 14A 15 7,-3.3 9,-2.3 33,-0.3 33,-0.3 -0.998 12.8-151.1-136.9 136.9 -4.2 5.8 -2.7 7 7 A a S S+ 0 0 27 31,-1.4 2,-0.4 -2,-0.4 32,-0.2 -0.178 72.0 96.5 -96.6 39.6 -3.7 6.6 1.0 8 8 A V S > S- 0 0 48 30,-0.2 3,-1.5 5,-0.0 -2,-0.1 -0.997 78.6-114.4-133.5 129.1 -5.0 10.1 0.6 9 9 A W T 3 S+ 0 0 209 -2,-0.4 3,-0.1 1,-0.2 -2,-0.1 -0.262 100.3 30.2 -59.7 143.0 -8.5 11.3 1.3 10 10 A G T 3 S+ 0 0 80 1,-0.4 -1,-0.2 2,-0.1 4,-0.1 -0.035 89.3 123.2 97.4 -31.8 -10.5 12.5 -1.7 11 11 A A X - 0 0 35 -3,-1.5 3,-1.2 1,-0.1 -1,-0.4 -0.274 68.7-126.1 -63.5 148.8 -8.6 10.2 -4.1 12 12 A V T 3 S+ 0 0 146 1,-0.3 2,-0.3 -3,-0.1 -1,-0.1 0.956 112.0 42.6 -60.9 -52.0 -10.8 7.7 -6.1 13 13 A N T 3 S+ 0 0 98 2,-0.0 -7,-3.3 -8,-0.0 -1,-0.3 -0.115 88.9 162.4 -86.9 36.8 -8.8 4.7 -5.0 14 14 A Y B < +b 6 0A 116 -3,-1.2 2,-0.3 -2,-0.3 -7,-0.2 -0.367 5.8 160.8 -63.0 133.8 -8.8 6.0 -1.4 15 15 A T - 0 0 30 -9,-2.3 3,-0.4 1,-0.1 -10,-0.1 -0.925 23.5-169.8-157.1 123.8 -8.0 3.5 1.3 16 16 A S S S+ 0 0 93 -2,-0.3 2,-2.1 1,-0.2 3,-0.3 0.947 85.9 53.1 -80.3 -54.8 -6.8 4.2 4.8 17 17 A N > + 0 0 103 1,-0.2 4,-2.7 2,-0.1 -1,-0.2 -0.378 65.7 154.6 -82.3 60.3 -5.9 0.7 6.1 18 18 A b H > + 0 0 3 -2,-2.1 4,-3.0 -3,-0.4 5,-0.3 0.890 69.2 56.3 -53.9 -44.8 -3.6 0.1 3.1 19 19 A N H > S+ 0 0 77 -3,-0.3 4,-2.5 11,-0.2 -1,-0.2 0.929 111.5 41.8 -55.2 -49.9 -1.6 -2.4 5.1 20 20 A A H > S+ 0 0 34 2,-0.2 4,-3.0 1,-0.2 -1,-0.2 0.900 113.3 53.5 -66.0 -41.9 -4.6 -4.5 5.9 21 21 A E H X S+ 0 0 66 -4,-2.7 4,-2.6 2,-0.2 -2,-0.2 0.950 113.9 41.6 -57.7 -50.9 -6.0 -4.2 2.4 22 22 A c H X>S+ 0 0 0 -4,-3.0 4,-2.3 1,-0.2 5,-1.9 0.913 115.1 50.8 -62.9 -44.0 -2.8 -5.4 0.8 23 23 A K H <5S+ 0 0 126 -4,-2.5 -2,-0.2 -5,-0.3 -1,-0.2 0.890 111.3 49.7 -60.8 -40.1 -2.4 -8.1 3.5 24 24 A R H <5S+ 0 0 209 -4,-3.0 -2,-0.2 1,-0.2 -1,-0.2 0.938 109.8 49.3 -63.6 -50.4 -6.0 -9.2 2.8 25 25 A R H <5S- 0 0 144 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.874 132.2 -88.3 -58.7 -39.2 -5.5 -9.4 -1.0 26 26 A G T <5S+ 0 0 62 -4,-2.3 2,-0.3 -5,-0.2 -3,-0.2 0.623 79.5 131.6 130.6 43.4 -2.3 -11.5 -0.4 27 27 A Y < - 0 0 61 -5,-1.9 17,-0.2 -8,-0.2 -1,-0.2 -0.764 65.8-111.3-117.3 164.7 0.7 -9.2 -0.0 28 28 A K S S- 0 0 138 15,-1.2 2,-0.2 -2,-0.3 16,-0.2 0.930 82.7 -63.6 -58.5 -47.2 3.5 -9.1 2.5 29 29 A G E -C 43 0A 1 14,-1.3 14,-1.0 -7,-0.1 2,-0.3 -0.799 49.0-105.0-169.6-147.2 2.2 -5.8 3.9 30 30 A G E +C 42 0A 7 12,-0.3 -11,-0.2 -2,-0.2 12,-0.2 -0.933 30.5 157.3-168.1 142.0 1.5 -2.2 3.2 31 31 A H - 0 0 59 10,-1.6 11,-0.1 -2,-0.3 -1,-0.1 0.333 52.7-119.6-150.6 2.0 3.1 1.2 3.9 32 32 A a S S- 0 0 18 9,-0.9 7,-0.3 2,-0.1 3,-0.2 0.809 79.4 -50.2 57.3 30.7 1.9 3.6 1.2 33 33 A G - 0 0 13 8,-0.5 4,-0.1 4,-0.2 10,-0.0 0.360 56.2-105.4 82.4 139.7 5.5 4.1 0.3 34 34 A S S S+ 0 0 112 2,-0.1 -1,-0.1 1,-0.1 -2,-0.1 0.121 113.1 1.3 -86.8 23.4 8.4 5.0 2.7 35 35 A F S S+ 0 0 172 -3,-0.2 2,-1.4 0, 0.0 -1,-0.1 0.137 126.1 60.3-168.4 -52.0 8.4 8.6 1.4 36 36 A L > + 0 0 111 1,-0.1 2,-3.1 2,-0.0 3,-1.2 -0.471 64.4 173.9 -91.4 60.8 5.7 9.2 -1.2 37 37 A N T 3 + 0 0 108 -2,-1.4 -4,-0.2 1,-0.2 -1,-0.1 -0.153 52.3 92.3 -66.0 47.6 3.0 8.2 1.3 38 38 A V T 3 S+ 0 0 68 -2,-3.1 -31,-1.4 -6,-0.2 2,-0.3 0.730 76.7 55.0-109.2 -37.6 0.3 9.2 -1.3 39 39 A N E < S-A 6 0A 52 -3,-1.2 2,-1.6 -7,-0.3 -33,-0.3 -0.740 88.1-112.8-101.5 149.7 -0.3 5.9 -3.0 40 40 A b E -A 5 0A 0 -35,-2.2 -36,-1.8 -2,-0.3 -35,-0.8 -0.623 40.2-172.8 -80.9 88.0 -1.3 2.6 -1.4 41 41 A W E -A 3 0A 69 -2,-1.6 -10,-1.6 -38,-0.2 -9,-0.9 -0.774 16.2-141.5 -89.6 112.5 1.8 0.7 -2.1 42 42 A c E -AC 2 30A 0 -40,-2.7 -40,-1.3 -2,-0.8 2,-0.3 -0.576 25.0-114.3 -73.3 125.7 1.5 -3.0 -1.1 43 43 A E E C 0 29A 67 -14,-1.0 -14,-1.3 -2,-0.4 -15,-1.2 -0.469 360.0 360.0 -65.3 120.1 4.7 -4.3 0.4 44 44 A T 0 0 90 -2,-0.3 -17,-0.0 -16,-0.2 -2,-0.0 -0.913 360.0 360.0-169.9 360.0 6.1 -6.9 -2.0