==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-APR-03 1P1L . COMPND 2 MOLECULE: PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUT . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR R.KNIEWEL,J.A.BUGLINO,C.D.LIMA,S.K.BURLEY,NEW YORK SGX RESEA . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6626.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 72 70.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 28.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 28.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 157 0, 0.0 59,-1.9 0, 0.0 60,-0.4 0.000 360.0 360.0 360.0 -28.1 11.2 24.3 9.7 2 2 A H E +A 59 0A 11 84,-0.4 84,-2.3 57,-0.3 2,-0.3 -0.973 360.0 173.1-129.4 143.9 13.3 25.8 12.4 3 3 A N E -AB 58 85A 8 55,-2.1 55,-1.8 -2,-0.4 2,-0.5 -0.968 31.9-125.7-148.1 161.5 16.8 24.9 13.6 4 4 A F E -AB 57 84A 67 80,-3.1 80,-3.5 -2,-0.3 2,-0.7 -0.951 24.8-152.0-106.2 123.7 19.6 25.9 15.8 5 5 A I E -AB 56 83A 0 51,-2.7 51,-2.8 -2,-0.5 2,-0.5 -0.907 10.2-156.2-101.8 116.3 22.9 26.2 13.9 6 6 A Y E +AB 55 82A 73 76,-3.2 76,-2.5 -2,-0.7 2,-0.3 -0.816 21.6 162.8 -95.7 127.7 25.8 25.5 16.2 7 7 A I E -AB 54 81A 0 47,-2.0 47,-2.6 -2,-0.5 2,-0.4 -0.971 26.0-142.8-141.0 150.8 29.2 27.0 15.2 8 8 A T E -A 53 0A 14 72,-0.8 72,-0.2 -2,-0.3 45,-0.2 -0.933 16.3-167.7-118.5 145.7 32.5 27.7 17.1 9 9 A A E -A 52 0A 0 43,-3.0 43,-2.4 -2,-0.4 6,-0.1 -0.942 28.7-122.4-130.2 154.0 34.7 30.7 16.6 10 10 A P S S+ 0 0 43 0, 0.0 2,-0.3 0, 0.0 40,-0.1 0.777 88.4 5.7 -65.7 -28.6 38.3 31.6 17.7 11 11 A S S > S- 0 0 38 1,-0.1 4,-2.3 41,-0.1 5,-0.1 -0.948 71.6-106.9-150.8 168.7 37.4 34.8 19.5 12 12 A L H > S+ 0 0 79 -2,-0.3 4,-3.0 2,-0.2 5,-0.3 0.909 118.2 57.1 -64.2 -42.0 34.6 37.0 20.8 13 13 A E H > S+ 0 0 131 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.918 111.3 40.3 -55.8 -49.0 35.5 39.5 18.0 14 14 A E H > S+ 0 0 19 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.884 113.9 55.0 -70.1 -36.1 35.1 37.0 15.2 15 15 A A H X S+ 0 0 0 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.937 112.2 42.2 -61.5 -45.6 32.0 35.5 16.9 16 16 A E H X S+ 0 0 86 -4,-3.0 4,-2.7 2,-0.2 -1,-0.2 0.846 112.1 55.4 -69.9 -33.7 30.3 38.9 17.1 17 17 A R H X S+ 0 0 131 -4,-1.9 4,-1.7 -5,-0.3 -2,-0.2 0.921 111.3 43.9 -63.4 -45.0 31.4 39.7 13.5 18 18 A I H X S+ 0 0 0 -4,-2.5 4,-2.0 2,-0.2 -2,-0.2 0.906 113.8 51.4 -66.5 -41.8 29.8 36.6 12.2 19 19 A A H X S+ 0 0 9 -4,-2.2 4,-2.2 -5,-0.2 -2,-0.2 0.914 110.1 47.5 -62.3 -46.2 26.7 37.1 14.3 20 20 A K H X S+ 0 0 128 -4,-2.7 4,-2.6 1,-0.2 -1,-0.2 0.848 110.4 53.0 -66.2 -34.0 26.2 40.7 13.1 21 21 A R H X S+ 0 0 101 -4,-1.7 4,-1.7 -5,-0.2 -1,-0.2 0.909 109.4 48.0 -68.2 -41.6 26.7 39.7 9.5 22 22 A L H <>S+ 0 0 1 -4,-2.0 5,-2.9 2,-0.2 6,-0.8 0.922 114.7 46.4 -64.7 -42.0 24.1 37.0 9.6 23 23 A L H ><5S+ 0 0 65 -4,-2.2 3,-1.4 1,-0.2 -2,-0.2 0.931 111.1 51.0 -66.4 -44.7 21.6 39.3 11.3 24 24 A E H 3<5S+ 0 0 148 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.821 112.0 47.1 -62.4 -32.5 22.2 42.2 8.8 25 25 A K T 3<5S- 0 0 134 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.382 112.9-121.6 -89.5 2.8 21.7 39.8 5.9 26 26 A K T < 5S+ 0 0 101 -3,-1.4 -3,-0.2 -4,-0.2 -2,-0.1 0.842 74.5 129.9 60.4 37.4 18.5 38.5 7.5 27 27 A L S -C 45 0A 141 3,-3.0 3,-0.7 -2,-0.6 -2,-0.1 -0.966 61.3 -12.5-145.5 127.3 44.1 16.9 14.5 43 43 A E T 3 S- 0 0 148 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.935 130.0 -42.9 49.9 58.1 47.2 15.6 12.7 44 44 A G T 3 S+ 0 0 59 1,-0.1 2,-0.3 -3,-0.1 -1,-0.2 0.559 124.0 68.0 72.2 12.4 47.8 12.7 15.1 45 45 A K E < S- C 0 42A 90 -3,-0.7 -3,-3.0 -5,-0.0 2,-0.4 -0.989 81.5-100.1-156.6 163.5 47.2 14.4 18.4 46 46 A I E - C 0 41A 113 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.731 37.9-165.4 -87.7 132.9 44.7 16.0 20.7 47 47 A E E - C 0 40A 60 -7,-3.0 -7,-2.4 -2,-0.4 2,-0.4 -0.944 3.0-157.3-120.5 143.6 44.7 19.8 20.5 48 48 A A E + C 0 39A 58 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.934 18.0 161.5-121.2 143.8 43.0 22.1 23.0 49 49 A A E - C 0 38A 41 -11,-2.0 -11,-3.4 -2,-0.4 2,-0.4 -0.991 39.3-114.6-157.7 152.5 42.0 25.7 22.5 50 50 A T E + C 0 37A 101 -2,-0.3 2,-0.2 -13,-0.2 -13,-0.2 -0.759 49.0 158.9 -87.9 139.3 39.7 28.3 24.0 51 51 A E E - C 0 36A 12 -15,-2.8 -15,-2.5 -2,-0.4 2,-0.4 -0.798 38.9-110.4-144.3-173.6 36.9 29.2 21.6 52 52 A F E -AC 9 35A 41 -43,-2.4 -43,-3.0 -17,-0.3 2,-0.2 -0.999 24.2-144.4-131.1 127.6 33.4 30.7 21.5 53 53 A A E -AC 8 34A 0 -19,-3.2 -19,-1.8 -2,-0.4 2,-0.4 -0.632 13.1-157.7 -88.7 151.3 30.3 28.7 20.7 54 54 A M E -AC 7 33A 2 -47,-2.6 -47,-2.0 -2,-0.2 2,-0.6 -0.997 10.0-161.6-132.6 135.3 27.4 30.2 18.8 55 55 A I E -AC 6 32A 38 -23,-2.4 -23,-2.3 -2,-0.4 2,-0.6 -0.969 14.8-163.5-116.2 109.8 23.8 29.2 18.7 56 56 A V E -AC 5 31A 1 -51,-2.8 -51,-2.7 -2,-0.6 2,-0.6 -0.862 3.0-156.4 -98.7 118.6 22.1 30.6 15.6 57 57 A K E +AC 4 30A 19 -27,-2.9 -28,-2.4 -2,-0.6 -27,-1.2 -0.836 39.8 112.7 -97.9 123.7 18.3 30.6 15.6 58 58 A T E -A 3 0A 0 -55,-1.8 -55,-2.1 -2,-0.6 2,-0.3 -0.920 66.3 -57.7-166.4-173.6 16.7 30.7 12.1 59 59 A R E > -A 2 0A 40 -2,-0.3 3,-2.3 -57,-0.2 -57,-0.3 -0.660 42.6-125.4 -85.1 142.4 14.6 28.8 9.6 60 60 A S G > S+ 0 0 41 -59,-1.9 3,-1.8 -2,-0.3 4,-0.2 0.829 108.9 63.4 -54.1 -35.2 15.9 25.4 8.4 61 61 A E G 3 S+ 0 0 121 -60,-0.4 -1,-0.3 1,-0.3 3,-0.2 0.595 95.5 62.4 -68.5 -8.3 15.7 26.6 4.7 62 62 A K G <> S+ 0 0 52 -3,-2.3 4,-2.2 1,-0.2 3,-0.4 0.483 73.2 99.3 -93.8 -3.4 18.3 29.2 5.6 63 63 A F H <> S+ 0 0 57 -3,-1.8 4,-3.0 -4,-0.2 5,-0.2 0.877 78.9 52.3 -49.9 -48.1 21.0 26.6 6.5 64 64 A A H > S+ 0 0 34 -4,-0.2 4,-2.5 -3,-0.2 -1,-0.2 0.893 112.0 44.9 -59.0 -43.5 22.8 26.8 3.2 65 65 A E H > S+ 0 0 91 -3,-0.4 4,-2.4 -4,-0.2 -1,-0.2 0.895 115.1 46.9 -68.5 -41.9 23.2 30.6 3.2 66 66 A V H X S+ 0 0 0 -4,-2.2 4,-2.7 2,-0.2 5,-0.3 0.950 113.4 50.7 -63.5 -47.3 24.3 30.7 6.8 67 67 A R H X S+ 0 0 93 -4,-3.0 4,-2.7 -5,-0.3 -2,-0.2 0.944 115.4 39.9 -54.3 -55.7 26.7 27.9 6.2 68 68 A D H X S+ 0 0 82 -4,-2.5 4,-1.8 1,-0.2 -1,-0.2 0.838 114.5 53.1 -66.7 -34.5 28.3 29.5 3.1 69 69 A E H X S+ 0 0 57 -4,-2.4 4,-0.8 -5,-0.2 -1,-0.2 0.918 113.1 43.9 -67.2 -43.4 28.3 33.0 4.7 70 70 A V H >X S+ 0 0 0 -4,-2.7 4,-1.8 -5,-0.2 3,-1.2 0.950 111.6 52.5 -66.2 -49.6 30.1 31.7 7.8 71 71 A K H 3< S+ 0 0 115 -4,-2.7 -1,-0.2 -5,-0.3 -2,-0.2 0.867 105.7 56.7 -54.6 -37.7 32.6 29.6 5.8 72 72 A A H 3< S+ 0 0 88 -4,-1.8 -1,-0.3 1,-0.2 -2,-0.2 0.736 119.0 28.9 -68.6 -24.1 33.5 32.6 3.7 73 73 A M H << S+ 0 0 34 -3,-1.2 -1,-0.2 -4,-0.8 -2,-0.2 0.468 95.5 113.0-115.3 -2.4 34.5 34.8 6.7 74 74 A H < - 0 0 17 -4,-1.8 -65,-0.1 1,-0.1 -4,-0.0 -0.398 63.0-138.9 -75.6 145.9 35.7 32.2 9.2 75 75 A S S S+ 0 0 81 -2,-0.1 2,-0.2 3,-0.0 -1,-0.1 0.792 82.6 81.5 -70.7 -29.6 39.3 31.8 10.3 76 76 A Y S S- 0 0 66 1,-0.1 -2,-0.1 4,-0.0 -3,-0.0 -0.532 71.5-145.2 -82.3 144.5 39.1 28.0 10.1 77 77 A T S S+ 0 0 127 1,-0.3 -1,-0.1 -2,-0.2 -3,-0.1 0.884 103.7 22.9 -71.6 -36.3 39.5 26.1 6.9 78 78 A T S S- 0 0 114 -3,-0.0 -1,-0.3 2,-0.0 3,-0.0 -0.651 86.6-175.1-131.6 75.9 36.9 23.6 8.2 79 79 A P - 0 0 15 0, 0.0 2,-0.5 0, 0.0 -70,-0.1 -0.303 34.4-102.7 -71.5 153.4 34.7 25.2 10.9 80 80 A C + 0 0 49 -72,-0.2 -72,-0.8 2,-0.0 2,-0.3 -0.659 48.8 163.9 -77.9 123.4 32.1 23.4 12.9 81 81 A I E +B 7 0A 28 -2,-0.5 2,-0.4 -74,-0.2 -74,-0.2 -0.806 7.9 162.8-143.7 97.0 28.7 24.3 11.4 82 82 A C E -B 6 0A 69 -76,-2.5 -76,-3.2 -2,-0.3 2,-0.5 -0.967 29.0-141.1-124.9 133.7 25.9 21.9 12.4 83 83 A A E -B 5 0A 45 -2,-0.4 -78,-0.2 -78,-0.2 -2,-0.0 -0.778 13.4-164.2 -94.6 132.5 22.2 22.3 12.3 84 84 A I E -B 4 0A 91 -80,-3.5 -80,-3.1 -2,-0.5 2,-0.1 -0.959 23.1-119.5-115.2 129.3 20.1 21.0 15.2 85 85 A P E -B 3 0A 112 0, 0.0 2,-0.7 0, 0.0 -82,-0.2 -0.398 11.3-140.4 -72.6 141.7 16.4 20.6 14.6 86 86 A I - 0 0 38 -84,-2.3 -84,-0.4 1,-0.2 3,-0.1 -0.912 14.2-172.2-101.1 117.6 13.7 22.4 16.7 87 87 A E - 0 0 189 -2,-0.7 2,-0.3 1,-0.3 -1,-0.2 0.904 67.9 -8.6 -75.6 -44.1 10.9 20.0 17.4 88 88 A R + 0 0 208 2,-0.0 2,-0.3 -86,-0.0 -1,-0.3 -0.965 65.2 173.6-150.9 161.6 8.5 22.6 19.0 89 89 A G - 0 0 38 -2,-0.3 2,-0.1 -3,-0.1 -3,-0.0 -0.983 46.5 -70.5-168.1 158.8 8.6 26.2 20.1 90 90 A L > - 0 0 115 -2,-0.3 4,-2.6 1,-0.2 3,-0.4 -0.362 44.8-138.4 -54.4 123.5 6.5 29.1 21.4 91 91 A K H > S+ 0 0 139 1,-0.2 4,-3.0 2,-0.2 5,-0.3 0.917 101.8 54.0 -51.4 -50.4 4.4 30.1 18.4 92 92 A E H > S+ 0 0 119 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.868 112.0 45.1 -52.5 -42.6 5.0 33.8 19.1 93 93 A F H > S+ 0 0 72 -3,-0.4 4,-1.9 2,-0.2 -1,-0.2 0.921 113.6 47.7 -70.5 -45.9 8.7 33.3 19.1 94 94 A L H X S+ 0 0 26 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.874 110.2 53.0 -64.3 -36.9 8.9 31.1 16.0 95 95 A D H X S+ 0 0 60 -4,-3.0 4,-2.4 -5,-0.3 -1,-0.2 0.865 106.2 54.3 -65.9 -34.6 6.6 33.6 14.1 96 96 A W H X S+ 0 0 103 -4,-1.3 4,-1.8 -5,-0.3 -1,-0.2 0.910 106.8 51.2 -64.8 -42.0 9.1 36.4 15.1 97 97 A I H X S+ 0 0 0 -4,-1.9 4,-2.6 1,-0.2 5,-0.3 0.956 110.9 48.3 -59.0 -49.9 11.9 34.4 13.6 98 98 A D H X S+ 0 0 29 -4,-2.2 4,-1.5 1,-0.2 -2,-0.2 0.907 110.9 48.7 -57.5 -47.6 10.0 33.9 10.3 99 99 A E H < S+ 0 0 141 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.827 113.2 50.5 -63.5 -30.5 9.0 37.6 10.0 100 100 A T H < S+ 0 0 23 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.917 117.0 36.2 -74.5 -45.1 12.7 38.5 10.6 101 101 A V H < 0 0 5 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.581 360.0 360.0 -84.6 -9.1 14.3 36.2 8.1 102 102 A E < 0 0 150 -4,-1.5 -1,-0.2 -5,-0.3 -76,-0.1 -0.772 360.0 360.0-120.4 360.0 11.4 36.7 5.6