==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 14-APR-03 1P1T . COMPND 2 MOLECULE: CLEAVAGE STIMULATION FACTOR, 64 KDA SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.M.PEREZ-CANADILLAS,G.VARANI . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7146.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 66.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 18.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 8 A D 0 0 192 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 129.3 2.1 0.0 -1.2 2 9 A P + 0 0 106 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.246 360.0 158.5 -75.0 166.4 2.6 3.2 -3.3 3 10 A A + 0 0 55 -2,-0.0 4,-0.4 2,-0.0 0, 0.0 0.078 30.3 122.5 177.4 45.3 1.2 3.7 -6.8 4 11 A V S >> S+ 0 0 109 2,-0.2 4,-1.1 1,-0.2 3,-0.8 0.793 72.5 62.8 -85.9 -32.9 1.0 7.4 -7.5 5 12 A D H 3> S+ 0 0 98 1,-0.3 4,-0.7 2,-0.2 3,-0.3 0.846 94.8 63.1 -59.5 -35.0 3.3 7.2 -10.5 6 13 A R H >4 S+ 0 0 108 1,-0.2 3,-0.9 2,-0.2 -1,-0.3 0.863 97.6 56.1 -57.5 -38.2 0.6 5.0 -12.1 7 14 A S H <4 S+ 0 0 59 -3,-0.8 -1,-0.2 -4,-0.4 78,-0.2 0.884 103.4 52.9 -61.3 -40.4 -1.8 7.9 -11.9 8 15 A L H 3< S+ 0 0 70 -4,-1.1 2,-0.7 -3,-0.3 -1,-0.3 0.635 103.3 66.2 -69.5 -13.5 0.7 10.0 -13.9 9 16 A R S << S+ 0 0 59 -3,-0.9 -1,-0.2 -4,-0.7 2,-0.2 -0.689 87.4 73.1-111.2 76.1 0.6 7.1 -16.4 10 17 A S - 0 0 18 -2,-0.7 75,-3.2 46,-0.2 2,-0.5 -0.655 54.8-157.9 175.3 125.0 -2.9 7.2 -17.7 11 18 A V E -AB 55 84A 0 44,-3.0 44,-2.5 73,-0.2 2,-0.4 -0.963 20.2-133.1-117.5 125.9 -4.8 9.4 -20.1 12 19 A F E -AB 54 83A 11 71,-3.2 71,-2.3 -2,-0.5 2,-0.4 -0.620 21.1-163.3 -79.4 129.2 -8.6 9.6 -20.0 13 20 A V E +AB 53 82A 0 40,-3.3 40,-2.9 -2,-0.4 2,-0.2 -0.950 17.4 158.1-117.3 133.2 -10.3 9.3 -23.4 14 21 A G E + B 0 81A 8 67,-2.2 67,-0.8 -2,-0.4 38,-0.1 -0.752 45.8 60.9-138.7-175.6 -13.9 10.3 -24.1 15 22 A N S S+ 0 0 78 1,-0.2 64,-0.4 -2,-0.2 37,-0.1 0.733 71.0 147.4 62.6 21.9 -16.3 11.4 -26.8 16 23 A I - 0 0 9 35,-1.3 -1,-0.2 -3,-0.1 64,-0.1 -0.832 34.4-154.8 -95.4 114.4 -15.5 8.0 -28.3 17 24 A P > - 0 0 41 0, 0.0 3,-1.1 0, 0.0 34,-0.1 -0.014 37.3 -90.6 -75.0-175.5 -18.4 6.6 -30.2 18 25 A Y T 3 S+ 0 0 121 1,-0.2 3,-0.1 32,-0.1 -2,-0.0 0.507 125.7 64.1 -75.4 -4.7 -19.1 2.9 -30.9 19 26 A E T 3 S+ 0 0 169 1,-0.2 2,-0.8 57,-0.1 -1,-0.2 0.603 92.4 67.2 -91.6 -15.7 -17.2 3.3 -34.1 20 27 A A S < S+ 0 0 6 -3,-1.1 -1,-0.2 56,-0.1 2,-0.1 -0.841 71.1 174.5-110.5 93.4 -14.0 4.1 -32.2 21 28 A T >> - 0 0 55 -2,-0.8 4,-3.1 -3,-0.1 3,-1.4 -0.342 50.8 -94.2 -90.9 174.8 -12.9 0.9 -30.4 22 29 A E H 3> S+ 0 0 65 1,-0.3 4,-3.3 2,-0.2 5,-0.4 0.803 124.6 65.4 -57.7 -30.2 -9.8 0.3 -28.4 23 30 A E H 3> S+ 0 0 156 1,-0.2 4,-0.6 2,-0.2 -1,-0.3 0.834 112.5 32.7 -61.1 -33.8 -8.3 -1.1 -31.6 24 31 A Q H <> S+ 0 0 77 -3,-1.4 4,-2.8 2,-0.2 -2,-0.2 0.871 118.7 51.4 -88.5 -45.2 -8.5 2.3 -33.1 25 32 A L H X S+ 0 0 0 -4,-3.1 4,-3.1 1,-0.2 5,-0.2 0.932 113.0 46.4 -57.0 -48.8 -7.9 4.3 -30.0 26 33 A K H X S+ 0 0 84 -4,-3.3 4,-2.2 1,-0.2 -1,-0.2 0.869 111.9 52.2 -61.2 -37.9 -4.8 2.3 -29.3 27 34 A D H X S+ 0 0 107 -4,-0.6 4,-0.9 -5,-0.4 -1,-0.2 0.879 111.2 46.9 -65.2 -39.2 -3.8 2.7 -32.9 28 35 A I H >< S+ 0 0 11 -4,-2.8 3,-0.7 1,-0.2 -2,-0.2 0.928 115.9 43.7 -67.6 -47.0 -4.2 6.5 -32.5 29 36 A F H >< S+ 0 0 1 -4,-3.1 3,-1.7 1,-0.2 -2,-0.2 0.774 103.7 67.1 -68.3 -27.5 -2.3 6.5 -29.2 30 37 A S H >< S+ 0 0 59 -4,-2.2 3,-1.6 1,-0.3 -1,-0.2 0.829 91.3 61.6 -61.5 -32.9 0.3 4.2 -30.8 31 38 A E T << S+ 0 0 143 -4,-0.9 -1,-0.3 -3,-0.7 -2,-0.2 0.631 105.1 48.6 -68.0 -13.5 1.2 7.1 -33.1 32 39 A V T < S- 0 0 17 -3,-1.7 -1,-0.3 1,-0.5 -2,-0.2 0.348 132.9 -70.6-104.9 1.1 2.2 8.9 -30.0 33 40 A G S < S- 0 0 20 -3,-1.6 -1,-0.5 -4,-0.2 2,-0.4 -0.712 73.5 -36.2 133.6 176.3 4.2 6.0 -28.7 34 41 A P - 0 0 91 0, 0.0 24,-0.6 0, 0.0 2,-0.6 -0.588 54.4-144.6 -75.0 123.3 3.8 2.5 -27.3 35 42 A V - 0 0 14 -2,-0.4 22,-0.2 1,-0.2 3,-0.1 -0.801 3.6-154.4 -92.8 122.2 0.7 2.2 -25.1 36 43 A V S S- 0 0 21 -2,-0.6 2,-0.3 20,-0.3 21,-0.2 0.969 71.6 -28.5 -55.9 -58.9 1.2 -0.2 -22.2 37 44 A S E -C 56 0A 42 19,-2.7 19,-2.1 67,-0.1 2,-0.3 -0.976 52.3-152.2-156.9 161.9 -2.5 -0.9 -21.9 38 45 A F E +C 55 0A 7 -2,-0.3 2,-0.4 17,-0.3 17,-0.2 -0.925 15.9 172.6-147.1 117.0 -5.9 0.6 -22.6 39 46 A R E -C 54 0A 185 15,-2.4 15,-3.2 -2,-0.3 2,-0.2 -0.984 7.0-172.0-128.1 136.6 -9.1 -0.2 -20.8 40 47 A L E -C 53 0A 27 -2,-0.4 2,-0.6 13,-0.3 13,-0.3 -0.654 36.3 -86.7-118.0 174.9 -12.5 1.5 -21.1 41 48 A V E - 0 0 14 11,-2.4 9,-2.5 -2,-0.2 10,-0.6 -0.754 44.4-177.7 -88.1 121.9 -15.8 1.4 -19.3 42 49 A Y E -C 49 0A 128 -2,-0.6 2,-0.8 7,-0.2 5,-0.1 -0.975 25.4-133.4-126.2 119.3 -18.1 -1.4 -20.6 43 50 A D E >> -C 48 0A 69 5,-2.3 4,-0.8 -2,-0.5 5,-0.8 -0.587 19.0-174.2 -72.1 109.1 -21.6 -2.0 -19.3 44 51 A R T 45S+ 0 0 243 -2,-0.8 -1,-0.2 2,-0.2 0, 0.0 0.799 85.6 54.8 -73.1 -30.3 -21.8 -5.7 -18.8 45 52 A E T 45S+ 0 0 197 1,-0.2 -1,-0.2 3,-0.1 -2,-0.1 0.819 122.5 28.0 -71.3 -32.4 -25.4 -5.4 -17.9 46 53 A T T 45S- 0 0 81 2,-0.2 -2,-0.2 0, 0.0 -1,-0.2 0.417 96.6-139.5-105.9 -4.1 -26.1 -3.6 -21.1 47 54 A G T <5 + 0 0 60 -4,-0.8 -3,-0.2 1,-0.2 -2,-0.1 0.701 67.3 119.4 51.0 19.9 -23.3 -5.3 -22.9 48 55 A K E - 0 0 68 -25,-0.2 4,-2.3 1,-0.1 -1,-0.2 -1.000 69.6-140.9-136.9 134.3 6.2 6.8 -19.9 60 67 A Q H > S+ 0 0 55 -2,-0.4 4,-2.9 1,-0.2 5,-0.2 0.881 108.4 53.3 -57.3 -40.8 4.6 10.0 -18.4 61 68 A E H > S+ 0 0 154 1,-0.2 4,-3.1 2,-0.2 -1,-0.2 0.864 107.6 51.4 -62.4 -37.7 6.0 11.9 -21.3 62 69 A T H > S+ 0 0 15 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.909 112.9 43.9 -65.6 -44.2 4.4 9.5 -23.7 63 70 A A H X S+ 0 0 0 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.880 116.6 47.6 -67.6 -39.5 1.0 9.9 -22.0 64 71 A L H X S+ 0 0 91 -4,-2.9 4,-2.4 2,-0.2 5,-0.3 0.898 111.4 50.5 -67.5 -42.0 1.5 13.6 -21.9 65 72 A S H X S+ 0 0 46 -4,-3.1 4,-2.3 1,-0.2 -2,-0.2 0.870 109.9 50.7 -63.0 -38.3 2.6 13.7 -25.5 66 73 A A H X S+ 0 0 0 -4,-2.1 4,-2.7 2,-0.2 5,-0.4 0.872 109.0 52.2 -66.6 -38.3 -0.5 11.7 -26.4 67 74 A M H < S+ 0 0 36 -4,-1.9 -2,-0.2 2,-0.2 15,-0.2 0.922 117.8 35.9 -63.3 -46.8 -2.6 14.2 -24.5 68 75 A R H < S+ 0 0 228 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.753 118.0 53.7 -77.4 -26.1 -1.2 17.2 -26.3 69 76 A N H < S+ 0 0 75 -4,-2.3 -2,-0.2 -5,-0.3 -3,-0.2 0.838 130.5 12.2 -75.5 -35.1 -1.0 15.2 -29.5 70 77 A L S < S+ 0 0 7 -4,-2.7 -3,-0.2 -5,-0.1 4,-0.1 0.727 72.6 139.3-103.1 -90.9 -4.6 14.3 -29.3 71 78 A N S S- 0 0 88 -5,-0.4 10,-0.3 1,-0.2 12,-0.1 0.897 100.1 -5.5 37.6 88.6 -6.7 16.2 -26.7 72 79 A G S S+ 0 0 25 8,-2.0 2,-0.5 1,-0.2 9,-0.3 0.862 94.9 174.6 68.0 37.7 -9.8 16.7 -28.7 73 80 A R B -D 80 0B 96 7,-1.4 7,-1.9 6,-0.1 3,-0.4 -0.682 33.9-117.5 -81.9 121.4 -8.3 15.2 -31.8 74 81 A E S S+ 0 0 149 -2,-0.5 5,-0.1 5,-0.3 -1,-0.1 -0.303 75.4 101.9 -58.5 136.2 -10.7 14.8 -34.7 75 82 A F + 0 0 82 -3,-0.0 -1,-0.2 -55,-0.0 -2,-0.0 0.100 67.6 64.2 178.8 -40.5 -11.3 11.2 -35.7 76 83 A S S S- 0 0 16 -3,-0.4 -57,-0.1 -61,-0.1 -56,-0.1 0.112 122.2 -93.4 -89.3 20.7 -14.6 10.0 -34.2 77 84 A G S S+ 0 0 76 1,-0.2 -3,-0.1 -60,-0.0 -1,-0.0 0.514 120.9 38.2 79.6 6.0 -16.3 12.6 -36.4 78 85 A R S S- 0 0 167 -5,-0.2 2,-0.2 -63,-0.1 -1,-0.2 0.364 117.2 -66.6-144.0 -66.9 -16.2 15.0 -33.5 79 86 A A - 0 0 19 -64,-0.4 2,-1.1 -6,-0.1 -5,-0.3 -0.680 30.9-114.7 164.1 142.0 -13.0 14.8 -31.4 80 87 A L B -D 73 0B 1 -7,-1.9 -8,-2.0 -2,-0.2 -7,-1.4 -0.776 33.4-147.7 -96.2 93.2 -11.1 12.5 -29.1 81 88 A R E -B 14 0A 140 -2,-1.1 -67,-2.2 -67,-0.8 2,-0.5 -0.456 20.2-176.7 -63.8 118.8 -11.2 14.2 -25.7 82 89 A V E +B 13 0A 2 -2,-0.3 2,-0.3 -69,-0.2 -69,-0.2 -0.984 8.5 163.6-125.0 122.9 -8.0 13.3 -23.9 83 90 A D E -B 12 0A 46 -71,-2.3 -71,-3.2 -2,-0.5 4,-0.1 -0.995 47.9 -85.4-139.6 143.1 -7.2 14.5 -20.4 84 91 A N E > -B 11 0A 32 -2,-0.3 3,-1.1 -73,-0.2 -73,-0.2 -0.131 30.4-138.2 -45.5 134.9 -4.7 13.4 -17.8 85 92 A A T 3 S+ 0 0 3 -75,-3.2 -1,-0.2 1,-0.3 -74,-0.2 0.626 102.8 68.9 -72.4 -13.3 -6.2 10.5 -15.8 86 93 A A T 3 S+ 0 0 44 -76,-0.4 -1,-0.3 -79,-0.2 2,-0.2 0.069 76.8 129.1 -91.7 23.1 -4.7 12.2 -12.8 87 94 A S <> - 0 0 40 -3,-1.1 4,-1.4 -4,-0.1 5,-0.1 -0.498 67.6-129.1 -80.1 149.0 -7.3 14.9 -13.2 88 95 A E T 4 S+ 0 0 160 1,-0.2 4,-0.4 2,-0.2 -1,-0.1 0.854 114.6 39.8 -63.7 -36.3 -9.5 16.0 -10.3 89 96 A K T >> S+ 0 0 147 1,-0.2 4,-0.8 2,-0.2 3,-0.7 0.812 113.2 54.3 -81.0 -33.5 -12.5 15.5 -12.5 90 97 A N H 3> S+ 0 0 6 1,-0.2 4,-2.7 -6,-0.2 -2,-0.2 0.699 95.6 70.2 -71.9 -19.8 -11.2 12.4 -14.1 91 98 A K H 3X S+ 0 0 113 -4,-1.4 4,-1.9 1,-0.2 -1,-0.2 0.833 93.6 55.9 -65.2 -33.2 -10.7 11.1 -10.6 92 99 A E H <4 S+ 0 0 121 -3,-0.7 4,-0.3 -4,-0.4 -1,-0.2 0.884 110.8 43.2 -65.7 -40.4 -14.5 10.8 -10.3 93 100 A E H >X S+ 0 0 55 -4,-0.8 3,-1.6 1,-0.2 4,-1.0 0.898 112.9 51.3 -71.4 -42.7 -14.6 8.6 -13.4 94 101 A L H 3X S+ 0 0 46 -4,-2.7 4,-0.9 1,-0.3 -2,-0.2 0.831 93.0 75.3 -62.9 -32.8 -11.6 6.6 -12.3 95 102 A K H 3< S+ 0 0 140 -4,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.787 101.4 43.2 -48.9 -28.7 -13.4 6.1 -9.0 96 103 A S H <4 S+ 0 0 93 -3,-1.6 -1,-0.3 -4,-0.3 -2,-0.2 0.827 113.7 47.9 -85.6 -36.8 -15.5 3.7 -11.0 97 104 A L H >< S+ 0 0 49 -4,-1.0 2,-2.2 1,-0.1 3,-0.5 0.319 82.2 112.6 -84.9 7.5 -12.6 2.1 -12.8 98 105 A G T 3< + 0 0 62 -4,-0.9 -1,-0.1 1,-0.2 -3,-0.1 -0.454 32.0 122.6 -81.0 66.8 -11.0 1.8 -9.4 99 106 A T T 3 - 0 0 118 -2,-2.2 -1,-0.2 2,-0.0 -2,-0.1 0.864 61.3-139.6 -92.3 -46.8 -11.1 -2.0 -9.4 100 107 A G < + 0 0 73 -3,-0.5 -2,-0.1 1,-0.1 -3,-0.0 0.849 30.8 167.7 82.3 99.6 -7.4 -2.7 -8.9 101 108 A A - 0 0 55 2,-0.1 2,-2.0 0, 0.0 -1,-0.1 -0.971 47.4 -98.4-142.2 154.6 -6.1 -5.6 -10.9 102 109 A P + 0 0 139 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.522 65.1 148.9 -75.0 81.2 -2.7 -7.1 -11.8 103 110 A V 0 0 60 -2,-2.0 -2,-0.1 1,-0.1 -66,-0.1 -0.957 360.0 360.0-120.5 136.4 -2.4 -5.5 -15.3 104 111 A I 0 0 146 -2,-0.4 -1,-0.1 -68,-0.1 -67,-0.1 0.514 360.0 360.0 -83.6 360.0 0.8 -4.4 -17.0