==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA AND DNA BINDING PROTEIN/DNA 07-MAR-07 2P2R . COMPND 2 MOLECULE: POLY(RC)-BINDING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.L.JAMES,R.M.STROUD,Z.DU,S.FENN,R.TJHEN,J.K.LEE . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4782.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 69.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 19.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 37.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 286 A Q 0 0 167 0, 0.0 2,-0.2 0, 0.0 55,-0.0 0.000 360.0 360.0 360.0 135.3 42.7 9.8 55.2 2 287 A T + 0 0 112 53,-0.1 2,-0.2 54,-0.0 53,-0.2 -0.772 360.0 139.2-152.6 107.6 38.9 9.9 55.0 3 288 A T E -A 54 0A 93 51,-1.8 51,-2.1 -2,-0.2 2,-0.4 -0.764 40.4-114.9-135.0 177.7 36.7 13.0 55.6 4 289 A S E -A 53 0A 80 -2,-0.2 2,-0.4 49,-0.2 49,-0.2 -0.963 14.3-161.0-123.6 139.9 33.6 14.7 54.1 5 290 A H E -A 52 0A 80 47,-3.0 47,-2.9 -2,-0.4 2,-0.4 -0.977 13.0-154.9-115.8 135.1 33.1 18.0 52.3 6 291 A E E +A 51 0A 131 -2,-0.4 2,-0.3 45,-0.2 45,-0.2 -0.890 18.3 163.4-115.1 135.6 29.6 19.6 52.0 7 292 A L E -A 50 0A 28 43,-2.9 43,-3.1 -2,-0.4 2,-0.4 -0.944 28.0-133.0-140.9 169.3 28.4 22.0 49.4 8 293 A T E -A 49 0A 64 -2,-0.3 41,-0.2 41,-0.2 -2,-0.0 -0.981 18.0-170.5-124.2 133.2 25.1 23.4 48.1 9 294 A I E -A 48 0A 13 39,-2.4 39,-2.9 -2,-0.4 5,-0.1 -0.993 29.8-109.0-128.2 127.9 24.3 23.7 44.4 10 295 A P E >> -A 47 0A 54 0, 0.0 3,-2.2 0, 0.0 4,-1.1 -0.186 28.9-116.5 -54.1 147.8 21.2 25.5 43.0 11 296 A N H 3> S+ 0 0 70 35,-3.0 4,-0.5 1,-0.3 3,-0.3 0.785 113.9 56.9 -54.0 -35.4 18.5 23.3 41.5 12 297 A D H 34 S+ 0 0 134 34,-0.3 -1,-0.3 1,-0.2 4,-0.1 0.500 110.5 43.4 -79.8 -3.5 18.9 24.8 38.1 13 298 A L H <> S+ 0 0 48 -3,-2.2 4,-0.7 2,-0.1 3,-0.4 0.513 92.9 77.9-113.0 -11.7 22.7 23.8 38.0 14 299 A I H X S+ 0 0 5 -4,-1.1 4,-2.4 -3,-0.3 3,-0.4 0.812 83.8 64.5 -73.9 -26.9 22.6 20.3 39.4 15 300 A G H X S+ 0 0 48 -4,-0.5 4,-3.1 1,-0.2 -1,-0.2 0.854 98.9 55.3 -62.4 -33.4 21.4 18.7 36.1 16 301 A C H 4 S+ 0 0 19 -3,-0.4 -1,-0.2 2,-0.2 -2,-0.2 0.796 110.3 45.9 -65.8 -33.5 24.7 19.8 34.5 17 302 A I H < S+ 0 0 4 -4,-0.7 -2,-0.2 -3,-0.4 -1,-0.2 0.873 118.8 40.8 -74.9 -42.7 26.6 18.0 37.2 18 303 A I H < S- 0 0 44 -4,-2.4 7,-2.2 6,-0.2 6,-1.2 0.955 93.9-166.0 -72.5 -50.6 24.4 14.8 37.0 19 304 A G >< - 0 0 11 -4,-3.1 3,-2.3 5,-0.2 -3,-0.1 0.032 41.5 -34.4 79.1 165.0 24.0 14.6 33.2 20 305 A R G > S- 0 0 214 1,-0.3 3,-2.1 2,-0.2 4,-0.1 -0.351 135.6 -2.8 -56.9 128.0 21.6 12.5 31.2 21 306 A Q G 3 S- 0 0 182 1,-0.3 -1,-0.3 2,-0.1 -2,-0.1 0.697 125.4 -73.4 59.6 21.5 21.0 9.2 32.9 22 307 A G G <> S+ 0 0 12 -3,-2.3 4,-2.4 -7,-0.1 -1,-0.3 0.653 94.4 141.5 69.1 18.5 23.5 10.3 35.5 23 308 A A H <> + 0 0 62 -3,-2.1 4,-1.5 1,-0.2 -4,-0.2 0.828 67.6 47.4 -62.5 -36.8 26.4 9.8 33.0 24 309 A K H > S+ 0 0 74 -6,-1.2 4,-2.1 2,-0.2 -5,-0.2 0.933 114.2 43.6 -72.0 -49.3 28.4 12.8 34.1 25 310 A I H > S+ 0 0 5 -7,-2.2 4,-2.7 2,-0.2 -2,-0.2 0.887 111.9 54.7 -66.4 -35.6 28.2 12.3 37.8 26 311 A N H X S+ 0 0 85 -4,-2.4 4,-2.5 -8,-0.4 -1,-0.2 0.911 108.4 49.7 -61.6 -38.7 28.9 8.6 37.4 27 312 A E H X S+ 0 0 118 -4,-1.5 4,-3.0 2,-0.2 5,-0.3 0.891 109.4 51.1 -64.0 -41.6 32.1 9.6 35.5 28 313 A I H X S+ 0 0 9 -4,-2.1 4,-2.6 1,-0.2 6,-0.4 0.919 110.8 49.3 -64.0 -41.3 33.1 12.0 38.2 29 314 A R H X S+ 0 0 81 -4,-2.7 4,-2.3 2,-0.2 -2,-0.2 0.934 114.1 45.3 -58.4 -47.3 32.6 9.2 40.8 30 315 A Q H < S+ 0 0 172 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.912 117.4 42.3 -68.0 -44.5 34.7 6.8 38.7 31 316 A X H < S+ 0 0 103 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.924 122.7 37.3 -67.9 -44.7 37.5 9.3 37.9 32 317 A S H < S- 0 0 7 -4,-2.6 -2,-0.2 -5,-0.3 30,-0.2 0.805 88.8-142.2 -79.9 -30.0 37.8 10.8 41.4 33 318 A G < + 0 0 56 -4,-2.3 2,-0.2 -5,-0.3 22,-0.1 0.477 56.1 136.4 75.0 2.5 37.1 7.7 43.5 34 319 A A - 0 0 7 -6,-0.4 2,-0.5 24,-0.3 -1,-0.3 -0.494 61.9-119.6 -80.7 152.2 35.2 9.9 45.9 35 320 A Q E -B 53 0A 140 18,-3.2 18,-2.9 -2,-0.2 2,-0.4 -0.817 37.3-168.8 -84.6 123.8 31.8 8.9 47.4 36 321 A I E -B 52 0A 9 -2,-0.5 2,-0.5 16,-0.2 16,-0.2 -0.979 11.6-173.0-123.8 128.1 29.4 11.6 46.2 37 322 A K E -B 51 0A 128 14,-2.5 14,-2.4 -2,-0.4 2,-0.6 -0.974 4.7-169.1-122.3 117.3 25.8 12.1 47.5 38 323 A I E -B 50 0A 20 -2,-0.5 12,-0.2 12,-0.2 -2,-0.0 -0.941 30.6-122.2-102.5 122.4 23.4 14.5 45.9 39 324 A A - 0 0 30 10,-3.1 3,-0.1 -2,-0.6 -1,-0.0 -0.195 27.3-100.3 -62.9 152.2 20.4 15.0 48.1 40 325 A N - 0 0 126 1,-0.1 9,-0.2 8,-0.1 -1,-0.1 -0.304 56.7 -77.9 -61.2 153.2 16.9 14.3 46.8 41 326 A P - 0 0 97 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.290 40.9-154.9 -56.0 143.1 14.9 17.4 45.7 42 327 A V > - 0 0 85 5,-0.2 3,-2.2 3,-0.2 5,-0.1 -0.992 8.1-147.6-121.5 113.9 13.4 19.3 48.6 43 328 A E T 3 S+ 0 0 206 -2,-0.5 -1,-0.1 1,-0.3 0, 0.0 0.785 96.8 48.8 -58.5 -33.0 10.3 21.3 47.4 44 329 A G T 3 S+ 0 0 79 -3,-0.1 2,-0.4 2,-0.0 -1,-0.3 0.245 101.9 81.3 -90.0 11.6 10.9 24.2 49.8 45 330 A S < - 0 0 35 -3,-2.2 -3,-0.2 1,-0.1 3,-0.0 -0.923 62.2-154.5-118.6 146.4 14.5 24.5 48.9 46 331 A T S S+ 0 0 110 -2,-0.4 -35,-3.0 -36,-0.0 -34,-0.3 0.485 79.9 43.8 -86.4 -7.5 16.2 26.3 45.9 47 332 A D E S-A 10 0A 49 -37,-0.3 2,-0.4 -36,-0.1 -5,-0.2 -0.868 72.0-122.8-139.7 168.8 19.2 24.0 46.1 48 333 A R E -A 9 0A 41 -39,-2.9 -39,-2.4 -2,-0.3 2,-0.3 -0.935 25.8-125.6-115.0 133.7 20.6 20.5 46.6 49 334 A Q E -A 8 0A 61 -2,-0.4 -10,-3.1 -9,-0.2 2,-0.4 -0.613 26.3-167.2 -74.6 134.3 23.0 19.3 49.2 50 335 A V E -AB 7 38A 4 -43,-3.1 -43,-2.9 -2,-0.3 2,-0.4 -0.995 2.8-167.5-126.3 129.8 26.1 17.6 47.8 51 336 A T E -AB 6 37A 39 -14,-2.4 -14,-2.5 -2,-0.4 2,-0.5 -0.978 2.6-165.1-120.8 130.6 28.5 15.6 50.0 52 337 A I E +AB 5 36A 0 -47,-2.9 -47,-3.0 -2,-0.4 2,-0.4 -0.973 13.9 179.6-118.2 122.5 31.9 14.5 48.8 53 338 A T E +AB 4 35A 24 -18,-2.9 -18,-3.2 -2,-0.5 2,-0.3 -0.946 28.6 64.5-127.4 141.9 33.6 11.8 50.9 54 339 A G E S-A 3 0A 15 -51,-2.1 -51,-1.8 -2,-0.4 -20,-0.1 -0.972 79.6 -13.5 150.3-161.0 37.0 10.1 50.6 55 340 A S > - 0 0 33 -2,-0.3 4,-2.9 -53,-0.2 5,-0.3 -0.217 66.6-105.1 -67.9 161.8 40.7 10.6 50.5 56 341 A A H > S+ 0 0 56 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.933 123.6 46.7 -55.5 -44.6 42.2 14.1 50.3 57 342 A A H > S+ 0 0 71 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.907 113.0 48.9 -66.1 -41.0 43.2 13.4 46.7 58 343 A S H > S+ 0 0 23 2,-0.2 4,-2.6 1,-0.2 -24,-0.3 0.915 112.6 46.8 -65.8 -44.3 39.7 12.0 45.8 59 344 A I H X S+ 0 0 21 -4,-2.9 4,-2.5 2,-0.2 5,-0.2 0.936 113.3 49.5 -65.1 -43.0 37.8 14.9 47.3 60 345 A S H X S+ 0 0 81 -4,-2.4 4,-2.3 -5,-0.3 -2,-0.2 0.926 113.1 45.8 -61.8 -46.0 40.0 17.5 45.7 61 346 A L H X S+ 0 0 68 -4,-2.4 4,-2.7 2,-0.2 -1,-0.2 0.912 111.9 51.2 -64.6 -43.2 39.7 15.8 42.2 62 347 A A H X S+ 0 0 0 -4,-2.6 4,-2.4 1,-0.2 -1,-0.2 0.931 111.5 48.3 -57.5 -44.6 35.9 15.4 42.6 63 348 A Q H X S+ 0 0 44 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.904 110.6 51.3 -64.7 -40.3 35.6 19.1 43.5 64 349 A Y H X S+ 0 0 146 -4,-2.3 4,-2.5 2,-0.2 -2,-0.2 0.950 110.7 48.1 -58.8 -51.2 37.8 20.1 40.5 65 350 A L H X S+ 0 0 24 -4,-2.7 4,-1.8 1,-0.2 -2,-0.2 0.872 110.9 51.0 -61.0 -38.6 35.6 18.1 38.1 66 351 A I H X S+ 0 0 2 -4,-2.4 4,-2.8 2,-0.2 -1,-0.2 0.924 110.1 50.1 -63.1 -44.7 32.4 19.6 39.6 67 352 A N H X S+ 0 0 75 -4,-2.5 4,-2.5 2,-0.2 -2,-0.2 0.875 105.5 56.4 -62.8 -37.4 34.0 23.1 39.1 68 353 A V H < S+ 0 0 66 -4,-2.5 4,-0.5 1,-0.2 -1,-0.2 0.951 111.6 43.8 -56.8 -47.1 34.8 22.3 35.5 69 354 A R H >X S+ 0 0 61 -4,-1.8 3,-1.3 1,-0.2 4,-0.7 0.923 113.1 50.1 -64.5 -46.1 31.2 21.5 34.9 70 355 A L H >< S+ 0 0 36 -4,-2.8 3,-1.0 1,-0.3 -1,-0.2 0.868 102.1 62.9 -61.6 -34.3 29.9 24.5 36.8 71 356 A S T 3< S+ 0 0 104 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.646 100.1 54.6 -69.2 -13.4 32.2 26.8 34.8 72 357 A S T <4 0 0 89 -3,-1.3 -1,-0.3 -4,-0.5 -2,-0.2 0.714 360.0 360.0 -83.7 -25.6 30.4 25.8 31.6 73 358 A E << 0 0 92 -3,-1.0 -60,-0.1 -4,-0.7 -3,-0.0 -0.460 360.0 360.0-112.3 360.0 26.9 26.8 32.8