==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 07-MAR-07 2P2T . COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN 1, CYTOPLASMIC; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR G.BENISON,P.A.KARPLUS,E.BARBAR . 96 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5777.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 30 31.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 29.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A D 0 0 226 0, 0.0 2,-0.1 0, 0.0 76,-0.0 0.000 360.0 360.0 360.0-101.7 4.0 -10.4 3.3 2 4 A R - 0 0 51 1,-0.1 2,-0.6 22,-0.1 22,-0.0 -0.334 360.0-124.3 -85.6 153.5 5.0 -11.7 -0.2 3 5 A K - 0 0 159 -2,-0.1 74,-1.3 2,-0.0 2,-0.5 -0.820 17.8-144.4-105.7 110.7 4.3 -15.1 -1.9 4 6 A A E +A 76 0A 52 -2,-0.6 2,-0.5 72,-0.2 72,-0.2 -0.559 21.3 177.0 -79.7 117.0 7.2 -17.2 -3.2 5 7 A V E -A 75 0A 50 70,-2.6 70,-3.0 -2,-0.5 2,-0.5 -0.968 18.6-148.8-122.9 120.8 6.5 -19.2 -6.4 6 8 A I E +A 74 0A 70 -2,-0.5 68,-0.2 68,-0.2 3,-0.1 -0.755 18.4 174.3 -91.8 129.3 9.1 -21.2 -8.1 7 9 A K E + 0 0 111 66,-2.1 2,-0.3 -2,-0.5 67,-0.2 0.764 69.9 1.9-105.8 -37.1 8.7 -21.4 -11.9 8 10 A N E S+A 73 0A 58 65,-1.7 65,-1.7 84,-0.0 -1,-0.4 -0.935 70.4 176.6-155.2 128.4 11.8 -23.3 -13.0 9 11 A A E +A 72 0A 36 -2,-0.3 2,-0.2 63,-0.2 63,-0.2 -0.997 23.8 170.2-141.7 136.6 14.5 -24.6 -10.9 10 12 A D E +A 71 0A 32 61,-3.0 61,-1.7 -2,-0.4 2,-0.3 -0.739 56.8 96.4-134.6 88.1 17.7 -26.6 -11.3 11 13 A M E S-A 70 0A 2 -2,-0.2 59,-0.2 59,-0.2 5,-0.1 -0.962 84.4 -71.9-174.8 141.4 19.3 -26.3 -7.9 12 14 A S > - 0 0 42 57,-0.6 4,-1.3 -2,-0.3 3,-0.2 -0.181 47.5-121.1 -44.4 136.2 19.6 -28.1 -4.6 13 15 A E H > S+ 0 0 156 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.726 113.8 51.6 -58.6 -21.4 16.2 -28.0 -2.8 14 16 A E H > S+ 0 0 149 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.898 103.6 53.6 -82.4 -45.1 18.0 -26.2 0.1 15 17 A M H > S+ 0 0 14 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.700 105.4 59.6 -61.1 -22.3 19.7 -23.5 -2.1 16 18 A Q H X S+ 0 0 33 -4,-1.3 4,-2.3 2,-0.2 5,-0.2 0.981 105.8 42.4 -69.9 -60.1 16.2 -22.8 -3.4 17 19 A Q H X S+ 0 0 118 -4,-1.2 4,-1.6 1,-0.2 -2,-0.2 0.765 116.1 54.8 -54.7 -23.0 14.7 -21.9 0.0 18 20 A D H X S+ 0 0 34 -4,-1.4 4,-2.4 2,-0.2 -1,-0.2 0.905 104.4 50.6 -76.5 -44.1 18.0 -20.1 0.5 19 21 A A H X S+ 0 0 0 -4,-2.2 4,-1.4 1,-0.2 -2,-0.2 0.841 109.3 51.8 -62.4 -35.1 17.5 -18.1 -2.7 20 22 A V H X S+ 0 0 13 -4,-2.3 4,-3.3 2,-0.2 -1,-0.2 0.926 109.6 50.5 -66.5 -43.2 14.1 -17.1 -1.5 21 23 A D H X S+ 0 0 75 -4,-1.6 4,-2.6 2,-0.2 5,-0.2 0.928 109.5 48.8 -55.9 -51.3 15.6 -16.0 1.8 22 24 A C H X S+ 0 0 0 -4,-2.4 4,-1.1 1,-0.2 -1,-0.2 0.811 116.6 44.4 -60.9 -33.0 18.2 -13.8 0.2 23 25 A A H X S+ 0 0 0 -4,-1.4 4,-2.7 -5,-0.2 5,-0.2 0.884 109.9 53.3 -79.1 -41.4 15.5 -12.3 -2.0 24 26 A T H X S+ 0 0 68 -4,-3.3 4,-1.9 1,-0.2 -2,-0.2 0.906 112.4 45.8 -63.0 -38.3 13.0 -11.8 0.8 25 27 A Q H X S+ 0 0 104 -4,-2.6 4,-2.1 -5,-0.2 -1,-0.2 0.872 112.6 51.8 -66.3 -37.0 15.7 -9.9 2.8 26 28 A A H X S+ 0 0 0 -4,-1.1 4,-2.3 -5,-0.2 -2,-0.2 0.841 110.1 47.5 -69.6 -34.7 16.5 -8.0 -0.4 27 29 A L H < S+ 0 0 53 -4,-2.7 -1,-0.2 2,-0.2 -2,-0.2 0.867 111.5 50.9 -74.4 -35.8 12.9 -7.0 -1.0 28 30 A E H < S+ 0 0 86 -4,-1.9 -2,-0.2 -5,-0.2 -1,-0.2 0.898 121.0 34.7 -66.6 -38.5 12.6 -6.0 2.6 29 31 A K H < S+ 0 0 133 -4,-2.1 -2,-0.2 -5,-0.1 -3,-0.2 0.973 117.5 39.6 -80.4 -59.7 15.7 -3.8 2.4 30 32 A Y < - 0 0 76 -4,-2.3 3,-0.0 -5,-0.2 0, 0.0 -0.435 48.6-169.5 -94.6 164.8 15.9 -2.3 -1.1 31 33 A N + 0 0 140 -2,-0.1 2,-0.1 1,-0.0 -1,-0.1 0.706 64.4 79.5-118.0 -47.0 13.3 -0.9 -3.5 32 34 A I S > S- 0 0 100 1,-0.1 4,-2.4 2,-0.0 3,-0.4 -0.466 77.2-132.0 -66.5 138.6 14.9 -0.4 -6.9 33 35 A E H > S+ 0 0 77 1,-0.3 4,-2.1 2,-0.2 -1,-0.1 0.841 106.6 56.2 -63.8 -36.8 15.1 -3.7 -8.9 34 36 A K H > S+ 0 0 152 2,-0.2 4,-1.5 1,-0.2 -1,-0.3 0.884 110.3 46.4 -57.8 -40.1 18.7 -3.1 -9.8 35 37 A D H > S+ 0 0 62 -3,-0.4 4,-2.0 2,-0.2 3,-0.3 0.952 109.9 50.6 -73.2 -52.2 19.5 -2.8 -6.1 36 38 A I H X S+ 0 0 4 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.890 110.3 54.0 -44.8 -46.2 17.5 -5.8 -5.0 37 39 A A H X S+ 0 0 10 -4,-2.1 4,-2.3 1,-0.2 -1,-0.2 0.863 105.6 50.3 -64.6 -38.7 19.4 -7.7 -7.7 38 40 A A H X S+ 0 0 41 -4,-1.5 4,-3.0 -3,-0.3 5,-0.2 0.886 107.2 55.4 -68.0 -38.0 22.9 -6.7 -6.5 39 41 A Y H X S+ 0 0 43 -4,-2.0 4,-2.1 2,-0.2 -2,-0.2 0.928 112.8 41.0 -57.9 -47.6 22.1 -7.8 -2.9 40 42 A I H X S+ 0 0 0 -4,-1.7 4,-2.2 2,-0.2 5,-0.2 0.919 115.4 51.1 -68.5 -44.2 21.1 -11.3 -4.0 41 43 A K H X S+ 0 0 56 -4,-2.3 4,-2.2 1,-0.2 11,-0.3 0.943 112.2 46.1 -58.2 -50.2 23.9 -11.6 -6.5 42 44 A K H X S+ 0 0 145 -4,-3.0 4,-1.6 1,-0.2 -1,-0.2 0.858 110.1 53.3 -66.3 -38.5 26.5 -10.5 -3.9 43 45 A E H X S+ 0 0 36 -4,-2.1 4,-3.0 -5,-0.2 -1,-0.2 0.896 111.5 45.3 -64.3 -41.7 25.2 -12.9 -1.3 44 46 A F H X S+ 0 0 0 -4,-2.2 4,-0.7 2,-0.2 -2,-0.2 0.855 109.3 54.5 -71.7 -34.7 25.4 -15.9 -3.5 45 47 A D H < S+ 0 0 42 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.869 114.0 45.7 -60.7 -34.8 28.8 -14.9 -4.8 46 48 A K H < S+ 0 0 170 -4,-1.6 -2,-0.2 -5,-0.2 -3,-0.2 0.986 122.0 31.2 -71.6 -62.4 29.7 -14.9 -1.1 47 49 A K H < S+ 0 0 99 -4,-3.0 2,-0.2 -5,-0.1 -3,-0.2 0.994 132.1 26.1 -62.3 -72.6 28.1 -18.2 0.1 48 50 A Y S < S- 0 0 60 -4,-0.7 4,-0.1 -5,-0.2 3,-0.1 -0.595 108.7 -94.4 -84.4 156.4 28.4 -20.3 -3.0 49 51 A N - 0 0 115 -2,-0.2 -1,-0.1 1,-0.1 -3,-0.1 -0.117 58.8 -41.6 -74.4 171.0 31.3 -19.2 -5.1 50 52 A P S S+ 0 0 70 0, 0.0 37,-0.1 0, 0.0 -1,-0.1 -0.209 91.7 53.2 -45.4 154.1 31.4 -16.8 -8.1 51 53 A T + 0 0 36 35,-0.2 35,-1.8 33,-0.1 2,-0.2 0.104 52.4 150.6-131.9 107.7 29.9 -16.2 -10.5 52 54 A W E -B 85 0A 0 -11,-0.3 2,-0.4 33,-0.2 33,-0.2 -0.483 19.8-165.3 -85.9 153.3 26.2 -15.4 -10.0 53 55 A H E -B 84 0A 62 31,-1.9 31,-1.8 -2,-0.2 2,-0.4 -0.991 8.0-164.0-135.3 141.9 24.1 -13.1 -12.1 54 56 A C E -B 83 0A 18 -2,-0.4 2,-0.4 29,-0.2 29,-0.2 -0.989 10.6-168.4-136.5 134.7 20.7 -11.9 -11.1 55 57 A I E -B 82 0A 72 27,-2.4 27,-2.4 -2,-0.4 2,-0.4 -0.980 8.0-173.8-120.2 131.4 17.9 -10.3 -12.9 56 58 A V E +B 81 0A 14 -2,-0.4 2,-0.3 25,-0.2 25,-0.2 -0.989 28.5 109.7-126.8 123.6 15.0 -8.6 -11.0 57 59 A G E -B 80 0A 5 23,-2.0 23,-2.9 -2,-0.4 3,-0.2 -0.994 63.1-120.7-174.1 174.0 11.9 -7.3 -12.7 58 60 A R S S+ 0 0 145 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.580 102.2 33.1-101.7 -16.4 8.2 -7.5 -13.6 59 61 A N S S+ 0 0 135 21,-0.1 2,-0.3 -3,-0.1 -1,-0.2 -0.816 78.3 104.6-149.0 104.2 8.7 -7.7 -17.3 60 62 A F - 0 0 34 -2,-0.3 36,-1.4 -3,-0.2 2,-0.4 -0.949 43.3-142.2-165.8 153.9 11.6 -9.4 -19.2 61 63 A G E -D 95 0B 48 -2,-0.3 2,-0.3 34,-0.2 34,-0.2 -0.928 25.4-162.4-115.1 149.6 12.4 -12.5 -21.2 62 64 A S E -D 94 0B 21 32,-3.1 32,-1.8 -2,-0.4 2,-0.2 -0.920 24.1-174.2-131.8 155.5 15.7 -14.2 -20.8 63 65 A Y E +D 93 0B 154 -2,-0.3 2,-0.2 30,-0.2 30,-0.2 -0.743 32.1 151.9-144.6 101.5 18.0 -16.7 -22.6 64 66 A V E -D 92 0B 23 28,-1.7 28,-2.1 -2,-0.2 2,-0.4 -0.736 40.5-128.5-124.4 168.6 21.0 -17.6 -20.5 65 67 A T E -D 91 0B 60 -2,-0.2 2,-0.3 26,-0.2 26,-0.3 -0.980 31.0-174.9-118.2 131.1 23.4 -20.5 -20.1 66 68 A H E -D 90 0B 0 24,-2.2 24,-2.7 -2,-0.4 20,-0.2 -0.961 31.7-101.4-130.9 147.9 24.0 -21.7 -16.5 67 69 A E > - 0 0 48 18,-3.7 3,-1.8 -2,-0.3 18,-0.3 -0.391 60.2 -86.5 -60.7 139.9 26.3 -24.2 -14.8 68 70 A T T 3 S+ 0 0 81 1,-0.3 -1,-0.1 -2,-0.1 -57,-0.0 -0.195 112.8 12.3 -52.2 133.1 24.3 -27.4 -14.0 69 71 A R T 3 S+ 0 0 118 -3,-0.1 -57,-0.6 -58,-0.1 -1,-0.3 0.575 106.0 95.5 77.6 13.1 22.5 -27.3 -10.7 70 72 A H E < +A 11 0A 49 -3,-1.8 15,-2.1 -59,-0.2 2,-0.3 -0.458 59.4 95.0-132.2 56.4 23.1 -23.5 -10.3 71 73 A F E +AC 10 84A 0 -61,-1.7 -61,-3.0 13,-0.2 2,-0.3 -0.937 36.1 165.4-154.8 123.8 19.9 -22.0 -11.7 72 74 A I E -AC 9 83A 0 11,-2.2 11,-2.9 -2,-0.3 2,-0.3 -0.995 9.0-176.9-140.9 151.1 16.6 -20.7 -10.3 73 75 A Y E +AC 8 82A 9 -65,-1.7 -66,-2.1 -2,-0.3 -65,-1.7 -0.969 25.8 141.4-145.6 122.8 13.8 -18.5 -11.5 74 76 A F E -AC 6 81A 0 7,-2.3 7,-3.4 -2,-0.3 2,-0.4 -0.980 42.2-111.0-160.0 163.5 10.9 -17.5 -9.3 75 77 A Y E -AC 5 80A 24 -70,-3.0 -70,-2.6 -2,-0.3 2,-0.6 -0.865 10.1-165.9-103.4 137.2 8.4 -14.9 -8.2 76 78 A L E > S-AC 4 79A 5 3,-2.6 3,-1.6 -2,-0.4 2,-0.5 -0.961 78.0 -49.7-113.2 107.9 8.3 -13.1 -4.9 77 79 A G T 3 S- 0 0 36 -74,-1.3 -72,-0.1 -2,-0.6 -2,-0.0 -0.531 121.5 -25.3 62.0-116.3 4.9 -11.5 -5.1 78 80 A Q T 3 S+ 0 0 152 -2,-0.5 2,-0.3 -3,-0.1 -1,-0.2 0.546 120.5 89.7-108.5 -11.8 4.7 -9.8 -8.4 79 81 A V E < - C 0 76A 11 -3,-1.6 -3,-2.6 -23,-0.0 2,-0.3 -0.649 67.6-146.9 -79.9 142.4 8.4 -9.3 -8.9 80 82 A A E -BC 57 75A 0 -23,-2.9 -23,-2.0 -2,-0.3 2,-0.4 -0.872 8.4-154.6-114.5 150.5 10.3 -12.2 -10.7 81 83 A I E -BC 56 74A 0 -7,-3.4 -7,-2.3 -2,-0.3 2,-0.5 -0.981 10.3-169.5-135.2 130.8 13.9 -13.3 -10.1 82 84 A L E +BC 55 73A 0 -27,-2.4 -27,-2.4 -2,-0.4 2,-0.4 -0.977 12.7 173.0-120.4 126.7 16.4 -15.0 -12.2 83 85 A L E +BC 54 72A 0 -11,-2.9 -11,-2.2 -2,-0.5 2,-0.3 -0.916 9.7 156.2-141.7 106.8 19.5 -16.2 -10.5 84 86 A F E -BC 53 71A 21 -31,-1.8 -31,-1.9 -2,-0.4 2,-0.6 -0.848 35.8-127.2-133.2 164.7 22.1 -18.4 -12.3 85 87 A K E +B 52 0A 22 -15,-2.1 -18,-3.7 -18,-0.3 2,-0.3 -0.948 39.7 145.7-118.0 112.3 25.7 -19.3 -12.1 86 88 A S 0 0 45 -35,-1.8 -35,-0.2 -2,-0.6 -2,-0.1 -0.861 360.0 360.0-146.2 113.2 27.8 -18.9 -15.3 87 89 A G 0 0 93 -2,-0.3 -20,-0.1 -37,-0.1 0, 0.0 -0.737 360.0 360.0 134.4 360.0 31.5 -17.9 -15.2 88 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 89 127 C V 0 0 123 0, 0.0 -22,-0.2 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 121.9 26.2 -26.7 -18.2 90 128 C Y E -D 66 0B 160 -24,-2.7 -24,-2.2 2,-0.0 2,-0.4 -0.672 360.0-119.0-132.0-171.6 22.7 -26.1 -19.7 91 129 C T E -D 65 0B 44 -26,-0.3 2,-0.4 -2,-0.2 -26,-0.2 -0.995 19.9-166.1-140.0 137.3 20.5 -23.4 -21.1 92 130 C K E -D 64 0B 38 -28,-2.1 -28,-1.7 -2,-0.4 2,-0.5 -0.980 13.3-153.5-134.4 136.4 17.1 -21.9 -20.1 93 131 C Q E -D 63 0B 157 -2,-0.4 2,-0.4 -30,-0.2 -30,-0.2 -0.874 21.9-176.7 -94.8 130.4 14.5 -19.6 -21.6 94 132 C T E -D 62 0B 8 -32,-1.8 -32,-3.1 -2,-0.5 2,-0.4 -0.995 6.3-179.1-130.8 144.0 12.4 -17.6 -19.1 95 133 C Q E -D 61 0B 125 -2,-0.4 -34,-0.2 -34,-0.2 2,-0.1 -0.995 27.3-119.3-142.5 131.1 9.5 -15.3 -19.7 96 134 C T 0 0 10 -36,-1.4 -38,-0.1 -2,-0.4 -37,-0.0 -0.418 360.0 360.0 -72.3 144.9 7.4 -13.2 -17.2 97 135 C T 0 0 148 -2,-0.1 -1,-0.1 -38,-0.0 0, 0.0 -0.388 360.0 360.0 -69.9 360.0 3.6 -13.9 -17.0