==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATOR 20-MAR-07 2P7C . COMPND 2 MOLECULE: STRAND 1 OF TWELVE BASE-PAIR DNA; . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.BOUDET,V.DUVAL,H.VAN MELCKEBEKE,M.BLACKLEDGE,A.AMOROSO, . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5918.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 59.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 8.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 36.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 B M 0 0 146 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 114.5 1.9 18.7 -0.6 2 2 B K - 0 0 170 1,-0.0 2,-0.4 0, 0.0 73,-0.2 -0.666 360.0 -81.1-122.6 175.6 4.5 16.2 -1.7 3 3 B K - 0 0 66 -2,-0.2 69,-0.0 1,-0.2 3,-0.0 -0.681 30.3-165.8 -84.1 129.4 5.0 12.4 -1.6 4 4 B I S S+ 0 0 100 -2,-0.4 2,-0.2 51,-0.1 -1,-0.2 0.971 72.6 50.8 -79.7 -62.4 6.1 10.9 1.7 5 5 B P S S- 0 0 13 0, 0.0 2,-0.8 0, 0.0 72,-0.1 -0.515 90.7-115.2 -80.3 146.8 7.1 7.3 0.6 6 6 B Q - 0 0 148 -2,-0.2 2,-0.1 71,-0.1 5,-0.1 -0.741 37.7-146.2 -84.2 109.4 9.5 6.8 -2.3 7 7 B I + 0 0 28 -2,-0.8 2,-0.2 71,-0.1 3,-0.1 -0.409 26.4 161.7 -81.1 152.2 7.4 5.0 -5.0 8 8 B S > - 0 0 83 -2,-0.1 4,-2.2 1,-0.1 5,-0.2 -0.784 55.5 -77.6-149.3-174.6 8.7 2.4 -7.5 9 9 B D H > S+ 0 0 119 -2,-0.2 4,-2.0 1,-0.2 -1,-0.1 0.983 131.6 36.8 -59.7 -61.2 7.1 -0.3 -9.8 10 10 B A H > S+ 0 0 29 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.788 114.3 59.5 -62.8 -31.1 6.6 -2.8 -7.0 11 11 B E H > S+ 0 0 14 2,-0.2 4,-1.2 1,-0.2 3,-0.2 0.949 109.7 40.2 -62.6 -52.8 5.7 -0.0 -4.5 12 12 B L H X S+ 0 0 38 -4,-2.2 4,-1.9 1,-0.2 -2,-0.2 0.898 106.7 64.4 -64.5 -46.0 2.7 1.2 -6.5 13 13 B E H X S+ 0 0 59 -4,-2.0 4,-1.0 1,-0.2 -1,-0.2 0.849 105.7 42.8 -48.2 -47.3 1.5 -2.3 -7.6 14 14 B V H X S+ 0 0 0 -4,-1.3 4,-1.8 -3,-0.2 3,-0.5 0.902 108.4 59.1 -69.4 -40.5 0.6 -3.3 -4.0 15 15 B M H X S+ 0 0 2 -4,-1.2 4,-3.1 1,-0.2 5,-0.2 0.873 100.3 58.4 -51.6 -45.6 -0.9 0.1 -3.1 16 16 B K H X S+ 0 0 131 -4,-1.9 4,-1.7 1,-0.2 -1,-0.2 0.878 106.3 46.8 -51.3 -48.6 -3.4 -0.5 -6.0 17 17 B V H X S+ 0 0 22 -4,-1.0 4,-1.6 -3,-0.5 -1,-0.2 0.864 113.4 48.8 -65.9 -38.5 -4.7 -3.7 -4.3 18 18 B I H < S+ 0 0 2 -4,-1.8 -2,-0.2 1,-0.2 -1,-0.2 0.923 113.6 46.6 -66.5 -44.1 -5.0 -2.0 -0.9 19 19 B W H < S+ 0 0 82 -4,-3.1 -2,-0.2 1,-0.2 -1,-0.2 0.744 105.2 60.9 -68.9 -27.1 -6.9 1.0 -2.5 20 20 B K H < S+ 0 0 171 -4,-1.7 -1,-0.2 -5,-0.2 -2,-0.2 0.941 107.5 50.7 -63.4 -47.4 -9.1 -1.5 -4.4 21 21 B H S < S- 0 0 51 -4,-1.6 3,-0.1 -5,-0.1 0, 0.0 -0.285 102.7-109.0 -79.4 167.7 -10.3 -2.9 -1.0 22 22 B S S S- 0 0 125 1,-0.2 2,-0.2 -2,-0.1 -1,-0.1 0.997 96.5 -36.4 -63.7 -59.5 -11.5 -0.4 1.7 23 23 B S S S- 0 0 32 46,-0.1 2,-0.3 -3,-0.0 46,-0.2 -0.528 82.6-116.2-129.8-154.6 -8.3 -1.2 3.6 24 24 B I B -A 68 0A 5 44,-1.7 44,-3.4 -2,-0.2 2,-0.3 -0.998 9.8-148.0-150.8 152.0 -6.7 -4.7 3.5 25 25 B N >> - 0 0 45 -2,-0.3 4,-2.3 42,-0.2 3,-1.0 -0.843 43.5-102.1-111.0 148.3 -5.9 -7.7 5.9 26 26 B T H 3> S+ 0 0 48 -2,-0.3 4,-2.9 1,-0.3 5,-0.4 0.752 120.3 56.5 -43.1 -36.3 -2.7 -9.9 5.1 27 27 B N H 3> S+ 0 0 97 2,-0.2 4,-2.8 1,-0.2 -1,-0.3 0.941 112.2 40.6 -64.9 -45.3 -4.9 -12.7 3.7 28 28 B E H <> S+ 0 0 60 -3,-1.0 4,-1.8 2,-0.2 5,-0.2 0.899 118.0 49.6 -66.9 -39.4 -6.5 -10.4 1.1 29 29 B V H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 3,-0.5 0.988 118.9 35.9 -62.1 -59.4 -3.2 -8.7 0.5 30 30 B I H X S+ 0 0 39 -4,-2.9 4,-2.8 1,-0.2 5,-0.3 0.925 114.4 57.1 -60.3 -49.9 -1.2 -11.9 -0.0 31 31 B K H X S+ 0 0 93 -4,-2.8 4,-0.7 -5,-0.4 -1,-0.2 0.828 118.2 34.1 -49.0 -38.7 -4.1 -13.7 -1.8 32 32 B E H X S+ 0 0 44 -4,-1.8 4,-2.4 -3,-0.5 3,-0.4 0.947 117.9 48.8 -82.3 -56.7 -4.2 -10.8 -4.3 33 33 B L H X S+ 0 0 2 -4,-2.9 4,-2.0 1,-0.2 -3,-0.2 0.823 111.2 52.3 -54.0 -39.9 -0.5 -9.9 -4.7 34 34 B S H < S+ 0 0 42 -4,-2.8 -1,-0.2 -5,-0.3 -2,-0.2 0.855 112.1 44.4 -67.5 -39.7 0.5 -13.6 -5.1 35 35 B K H < S+ 0 0 143 -4,-0.7 -2,-0.2 -3,-0.4 -1,-0.2 0.908 123.0 36.2 -71.0 -45.2 -2.0 -14.2 -8.0 36 36 B T H < S+ 0 0 103 -4,-2.4 -2,-0.2 -5,-0.1 -3,-0.2 0.989 123.5 31.2 -72.0 -65.3 -1.1 -10.9 -9.8 37 37 B S S < S- 0 0 18 -4,-2.0 -27,-0.0 -5,-0.2 -1,-0.0 -0.513 81.5-115.0 -96.3 162.3 2.6 -10.6 -9.2 38 38 B T S S+ 0 0 134 -2,-0.2 -1,-0.1 5,-0.0 5,-0.0 0.978 72.7 120.4 -54.7 -68.1 5.4 -13.3 -8.8 39 39 B W - 0 0 40 4,-0.1 -2,-0.1 1,-0.1 -3,-0.1 0.492 55.8-139.5 -3.6 115.8 6.3 -12.4 -5.2 40 40 B S > - 0 0 50 1,-0.1 4,-2.5 4,-0.0 5,-0.2 -0.208 38.7 -85.7 -77.6 173.2 5.8 -15.2 -2.6 41 41 B P H > S+ 0 0 74 0, 0.0 4,-1.0 0, 0.0 -1,-0.1 0.805 133.9 46.8 -51.7 -32.3 4.3 -14.7 0.9 42 42 B K H >> S+ 0 0 174 2,-0.2 3,-0.6 1,-0.1 4,-0.5 0.970 112.4 47.8 -71.1 -57.3 7.9 -13.8 2.1 43 43 B T H >> S+ 0 0 62 1,-0.2 3,-0.6 2,-0.2 4,-0.6 0.777 107.2 59.2 -51.1 -40.7 8.6 -11.4 -0.9 44 44 B I H >X S+ 0 0 0 -4,-2.5 3,-0.8 1,-0.2 4,-0.5 0.899 93.7 65.1 -57.4 -49.4 5.2 -9.7 -0.4 45 45 B Q H XX S+ 0 0 59 -4,-1.0 4,-3.1 -3,-0.6 3,-0.7 0.676 88.5 63.5 -56.2 -30.9 5.9 -8.5 3.2 46 46 B T H S+ 0 0 79 -3,-0.6 4,-2.1 -4,-0.5 5,-0.7 0.927 99.0 55.8 -61.9 -43.6 8.8 -6.1 2.6 47 47 B M H <<5S+ 0 0 18 -3,-0.8 -1,-0.2 -4,-0.6 -2,-0.2 0.709 118.7 35.6 -59.0 -25.6 6.6 -3.8 0.5 48 48 B L H XS+ 0 0 20 -5,-0.7 5,-2.3 2,-0.2 4,-1.4 0.953 113.0 45.2 -51.1 -52.9 6.7 1.1 3.9 52 52 B I H <5S+ 0 0 20 -4,-2.5 3,-0.3 3,-0.2 -2,-0.2 0.891 111.6 52.1 -59.9 -42.8 5.1 1.1 7.4 53 53 B K H <5S+ 0 0 135 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.855 118.5 37.4 -60.5 -37.6 8.6 1.5 9.0 54 54 B K H <5S- 0 0 138 -4,-2.5 -1,-0.2 -3,-0.2 -2,-0.2 0.506 123.7-101.8 -94.0 -9.4 9.2 4.5 6.8 55 55 B G T <5S+ 0 0 19 -4,-1.4 -3,-0.2 -3,-0.3 -4,-0.1 0.408 86.8 117.6 105.2 0.6 5.6 5.9 6.9 56 56 B A S