==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 15-MAY-03 1PC0 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN AF1917; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR D.J.SIDOTE,D.W.HOFFMAN . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4688.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 67.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 45.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 14.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 17 A G 0 0 57 0, 0.0 2,-2.5 0, 0.0 49,-0.1 0.000 360.0 360.0 360.0 31.7 -6.7 7.4 8.5 2 18 A L + 0 0 35 19,-0.2 19,-1.9 49,-0.1 2,-0.6 -0.423 360.0 161.7 -71.2 75.6 -5.8 4.0 7.1 3 19 A M E +AB 20 50A 116 -2,-2.5 47,-1.8 47,-1.6 2,-0.3 -0.861 11.0 168.6-100.3 123.6 -6.1 5.0 3.5 4 20 A V E -AB 19 49A 1 15,-2.0 15,-2.2 -2,-0.6 2,-0.5 -0.978 36.1-139.9-136.9 153.3 -4.3 2.6 1.1 5 21 A E E -AB 18 48A 41 43,-1.9 43,-2.2 -2,-0.3 2,-0.4 -0.940 36.8-170.1-107.6 122.5 -4.0 1.8 -2.5 6 22 A V E -AB 17 47A 1 11,-2.2 11,-1.6 -2,-0.5 2,-0.5 -0.959 26.3-173.8-128.9 138.2 -3.9 -2.0 -2.9 7 23 A V E +AB 16 46A 49 39,-2.0 39,-1.8 -2,-0.4 2,-0.3 -0.971 33.8 135.4-123.4 117.4 -3.2 -4.5 -5.6 8 24 A E E +A 15 0A 10 7,-1.6 7,-1.9 -2,-0.5 6,-0.2 -0.863 14.7 83.2-147.4 177.2 -3.8 -8.1 -4.6 9 25 A S S >S- 0 0 7 -2,-0.3 2,-1.7 5,-0.2 5,-0.5 0.443 87.5 -70.0 89.9 133.1 -5.4 -11.4 -5.8 10 26 A P T 5S+ 0 0 106 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.270 103.9 76.6 -54.4 82.4 -3.8 -14.1 -8.1 11 27 A N T 5S- 0 0 112 -2,-1.7 3,-0.4 1,-0.1 4,-0.1 -0.914 95.5 -95.5 177.8 157.4 -3.9 -12.0 -11.3 12 28 A H T 5S- 0 0 189 -2,-0.3 -1,-0.1 1,-0.2 -3,-0.0 0.750 120.2 -14.6 -56.2 -23.2 -2.2 -9.1 -13.1 13 29 A S T 5S+ 0 0 91 -3,-0.0 3,-0.4 -6,-0.0 -1,-0.2 -0.020 84.3 143.6-177.4 55.0 -4.9 -7.0 -11.5 14 30 A E S