==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT PROTEIN(CUPROPROTEIN)10-DEC-85 3PCY . COMPND 2 MOLECULE: PLASTOCYANIN; . SOURCE 2 ORGANISM_SCIENTIFIC: POPULUS NIGRA; . AUTHOR W.B.CHURCH,J.M.GUSS,J.J.POTTER,H.C.FREEMAN . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5093.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 65.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 21.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 62 0, 0.0 27,-2.8 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 146.3 -1.1 20.6 27.6 2 2 A D E -a 28 0A 100 25,-0.2 2,-0.4 27,-0.1 27,-0.2 -0.890 360.0-169.9-103.8 134.2 -2.0 24.0 26.2 3 3 A V E -a 29 0A 0 25,-3.0 27,-2.8 -2,-0.5 2,-0.3 -0.998 15.9-136.9-122.8 125.4 0.7 26.6 25.7 4 4 A L E -aB 30 15A 48 11,-3.4 11,-1.9 -2,-0.4 2,-0.9 -0.650 5.3-144.7 -82.4 136.8 -0.1 30.2 24.9 5 5 A L E S+aB 31 14A 0 25,-2.6 27,-2.6 -2,-0.3 28,-1.9 -0.887 83.2 5.6 -97.3 99.3 2.0 32.0 22.2 6 6 A G S S- 0 0 0 7,-2.6 6,-0.2 -2,-0.9 9,-0.1 0.355 91.2-101.6 96.0 131.4 2.0 35.5 23.7 7 7 A A > - 0 0 18 4,-2.4 3,-1.9 25,-0.1 -2,-0.0 -0.370 35.4-103.5 -77.1 164.3 0.6 36.5 27.1 8 8 A D T 3 S+ 0 0 139 1,-0.3 -1,-0.1 2,-0.2 26,-0.1 0.571 122.8 55.9 -66.7 -12.0 -2.8 38.2 27.4 9 9 A D T 3 S- 0 0 128 24,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.226 125.0-102.3 -99.1 8.3 -1.0 41.5 28.1 10 10 A G < + 0 0 36 -3,-1.9 -2,-0.2 1,-0.3 2,-0.1 0.453 69.3 152.5 82.1 9.5 0.9 41.2 24.8 11 11 A S - 0 0 56 1,-0.1 -4,-2.4 -5,-0.1 2,-1.7 -0.384 52.9-117.8 -77.4 151.2 4.2 40.0 26.3 12 12 A L S S+ 0 0 56 -6,-0.2 2,-0.3 78,-0.1 -1,-0.1 -0.614 70.9 115.3 -90.2 79.8 6.3 37.8 24.0 13 13 A A - 0 0 35 -2,-1.7 -7,-2.6 79,-0.1 2,-0.4 -0.951 68.1-115.9-142.7 155.3 6.4 34.7 26.1 14 14 A F E -B 5 0A 4 79,-0.5 -9,-0.2 -2,-0.3 79,-0.1 -0.814 41.6-122.5 -82.2 137.6 5.2 31.1 26.0 15 15 A V E S+B 4 0A 60 -11,-1.9 -11,-3.4 -2,-0.4 2,-0.1 -0.959 103.6 17.7-124.4 107.4 2.7 30.5 28.8 16 16 A P S S- 0 0 54 0, 0.0 -1,-0.3 0, 0.0 3,-0.1 0.690 81.0-179.9 -77.1 166.0 3.8 28.3 30.4 17 17 A S S S+ 0 0 44 1,-0.3 78,-2.7 -2,-0.1 2,-0.4 0.630 71.3 42.4-106.7 -20.1 7.4 28.4 29.3 18 18 A E E S+d 95 0B 136 76,-0.2 2,-0.3 -4,-0.1 -1,-0.3 -0.997 75.4 137.0-129.9 127.6 8.7 25.5 31.4 19 19 A F E -d 96 0B 23 76,-1.3 78,-2.4 -2,-0.4 2,-0.3 -0.971 39.3-127.9-163.6 165.2 6.8 22.3 31.8 20 20 A S E +d 97 0B 69 -2,-0.3 2,-0.3 76,-0.2 78,-0.2 -0.927 22.8 174.8-124.9 145.0 6.8 18.6 32.0 21 21 A I E -d 98 0B 3 76,-2.2 78,-2.3 -2,-0.3 3,-0.1 -0.875 30.5-110.7-139.2 165.7 4.7 16.0 30.1 22 22 A S > - 0 0 67 -2,-0.3 3,-1.8 76,-0.2 52,-0.2 -0.696 55.6 -73.7 -93.2 159.7 4.7 12.2 29.8 23 23 A P T 3 S+ 0 0 57 0, 0.0 52,-0.3 0, 0.0 -1,-0.1 -0.195 118.8 17.4 -52.4 136.1 5.7 10.5 26.5 24 24 A G T 3 S+ 0 0 51 50,-3.3 2,-0.2 1,-0.3 51,-0.1 0.302 86.4 137.5 84.6 -7.3 3.1 10.8 23.8 25 25 A E < - 0 0 74 -3,-1.8 49,-1.0 49,-0.4 2,-0.3 -0.519 53.9-123.6 -69.0 135.3 1.2 13.7 25.4 26 26 A K E - C 0 73A 120 -2,-0.2 2,-0.5 47,-0.2 47,-0.3 -0.653 14.5-151.0 -87.3 134.7 0.3 16.3 22.8 27 27 A I E - C 0 72A 0 45,-3.5 45,-2.3 -2,-0.3 2,-0.6 -0.952 8.3-158.5-100.0 125.4 1.4 20.0 23.3 28 28 A V E -aC 2 71A 29 -27,-2.8 -25,-3.0 -2,-0.5 2,-0.6 -0.964 2.6-160.0-109.2 109.3 -1.0 22.4 21.7 29 29 A F E -aC 3 70A 0 41,-3.1 41,-2.2 -2,-0.6 2,-0.5 -0.870 13.0-160.0 -87.4 118.3 0.7 25.7 20.9 30 30 A K E -aC 4 69A 53 -27,-2.8 -25,-2.6 -2,-0.6 2,-0.3 -0.941 18.6-126.3-112.3 119.1 -2.0 28.3 20.6 31 31 A N E +a 5 0A 2 37,-3.3 36,-2.3 -2,-0.5 -25,-0.1 -0.392 47.0 153.6 -62.7 119.0 -1.5 31.7 18.8 32 32 A N - 0 0 20 -27,-2.6 2,-0.3 1,-0.4 -26,-0.2 0.864 50.4 -19.9-119.1 -59.2 -2.6 34.2 21.4 33 33 A A S S+ 0 0 20 -28,-1.9 -1,-0.4 -22,-0.1 -24,-0.1 -0.971 108.2 33.6-155.2 149.6 -1.1 37.7 21.3 34 34 A G S S- 0 0 33 -2,-0.3 -28,-0.1 1,-0.1 -1,-0.1 0.784 90.3-154.7 78.1 31.5 1.9 39.5 19.8 35 35 A F + 0 0 79 29,-0.1 2,-0.2 -30,-0.1 -1,-0.1 -0.160 65.9 85.2 -75.4 170.4 2.3 37.5 16.7 36 36 A P + 0 0 39 0, 0.0 2,-0.3 0, 0.0 28,-0.2 0.451 65.0 166.5 -83.1 157.6 3.8 36.3 14.4 37 37 A H B +G 63 0C 0 26,-1.8 26,-2.8 -2,-0.2 2,-0.3 -0.946 15.0 173.9-136.7 152.6 4.9 33.3 16.4 38 38 A N - 0 0 0 -2,-0.3 2,-0.4 24,-0.2 24,-0.1 -0.890 26.2-128.1-143.6 175.6 6.5 29.9 15.6 39 39 A I + 0 0 0 -2,-0.3 18,-2.4 19,-0.1 2,-0.4 -0.995 27.1 176.4-127.8 120.2 8.0 27.0 17.6 40 40 A V E -E 83 0B 6 43,-2.8 43,-2.3 -2,-0.4 2,-0.5 -0.999 20.7-142.7-128.6 126.7 11.5 25.8 16.7 41 41 A F E -E 82 0B 6 -2,-0.4 2,-0.7 11,-0.3 41,-0.2 -0.790 22.7-122.4 -92.1 134.4 13.3 23.0 18.6 42 42 A D > - 0 0 43 39,-1.6 3,-2.5 -2,-0.5 39,-0.3 -0.697 14.8-152.0 -74.4 111.3 17.0 23.5 19.0 43 43 A E G > S+ 0 0 142 -2,-0.7 3,-0.6 1,-0.3 -1,-0.2 0.699 96.9 52.6 -59.5 -24.9 18.7 20.5 17.5 44 44 A D G 3 S+ 0 0 131 1,-0.2 -1,-0.3 4,-0.0 4,-0.1 0.503 111.5 48.8 -91.2 -4.1 21.7 20.9 19.8 45 45 A S G < S+ 0 0 55 -3,-2.5 36,-2.2 36,-0.2 -1,-0.2 -0.177 93.2 81.1-131.4 41.6 19.3 21.0 22.8 46 46 A I S < S- 0 0 19 -3,-0.6 34,-0.2 34,-0.2 3,-0.1 -0.883 94.0 -66.9-133.0 162.8 17.0 18.0 22.4 47 47 A P > - 0 0 22 0, 0.0 3,-1.8 0, 0.0 31,-0.1 -0.101 65.1 -90.9 -52.8 140.2 17.6 14.3 23.3 48 48 A S T 3 S+ 0 0 125 1,-0.2 3,-0.1 -4,-0.1 -4,-0.0 -0.315 110.6 21.5 -51.7 134.7 20.2 12.6 21.2 49 49 A G T 3 S+ 0 0 88 1,-0.3 2,-0.4 -3,-0.1 -1,-0.2 0.239 88.2 128.3 91.7 -9.5 18.8 10.9 18.1 50 50 A V < - 0 0 29 -3,-1.8 2,-0.7 -7,-0.1 -1,-0.3 -0.667 59.3-131.1 -80.2 131.4 15.6 12.9 17.9 51 51 A D >> - 0 0 69 -2,-0.4 3,-1.1 1,-0.2 4,-0.6 -0.780 12.1-160.0 -83.4 110.7 15.0 14.5 14.5 52 52 A A H >> S+ 0 0 20 -2,-0.7 4,-1.1 1,-0.3 3,-0.8 0.804 88.1 67.8 -58.8 -31.2 14.2 18.2 15.2 53 53 A S H 34 S+ 0 0 88 1,-0.3 -1,-0.3 2,-0.2 3,-0.2 0.815 95.6 55.1 -65.1 -31.7 12.5 18.4 11.8 54 54 A K H <4 S+ 0 0 154 -3,-1.1 -1,-0.3 1,-0.2 -2,-0.2 0.784 118.0 31.4 -67.6 -34.3 9.7 16.1 13.0 55 55 A I H << S+ 0 0 14 -3,-0.8 2,-0.3 -4,-0.6 -2,-0.2 0.358 109.3 73.0-110.0 2.3 8.7 18.2 16.0 56 56 A S S < S- 0 0 22 -4,-1.1 -16,-0.2 -3,-0.2 2,-0.2 -0.814 70.4-124.9-118.4 154.2 9.5 21.8 14.8 57 57 A M - 0 0 20 -18,-2.4 -16,-0.2 -2,-0.3 2,-0.2 -0.461 48.9 -91.3 -77.0 164.5 8.0 24.3 12.4 58 58 A S > - 0 0 44 -2,-0.2 3,-1.5 1,-0.1 -19,-0.1 -0.578 31.6-118.4 -73.0 148.2 10.4 25.7 9.8 59 59 A E T 3 S+ 0 0 81 1,-0.3 -1,-0.1 -2,-0.2 26,-0.1 0.746 119.3 51.9 -53.8 -27.8 12.2 28.8 11.0 60 60 A E T 3 S+ 0 0 158 25,-0.1 -1,-0.3 2,-0.0 2,-0.3 0.607 89.6 90.9 -86.5 -18.8 10.3 30.3 8.0 61 61 A D < - 0 0 76 -3,-1.5 2,-0.3 2,-0.0 -4,-0.1 -0.615 58.4-171.9 -82.1 143.6 6.8 29.1 8.8 62 62 A L - 0 0 63 -2,-0.3 2,-0.6 -24,-0.1 -24,-0.2 -0.969 29.2-136.4-136.9 147.1 4.7 31.5 10.9 63 63 A L B +G 37 0C 12 -26,-2.8 -26,-1.8 -2,-0.3 4,-0.1 -0.969 31.2 172.6 -94.7 116.2 1.4 31.5 12.8 64 64 A N + 0 0 106 -2,-0.6 2,-0.3 -28,-0.2 -1,-0.1 0.501 49.2 60.2-104.2 -12.0 -0.1 34.9 11.8 65 65 A A S > S- 0 0 50 -32,-0.0 3,-1.5 1,-0.0 -34,-0.2 -0.893 88.6 -93.9-126.0 151.2 -3.6 34.9 13.2 66 66 A K T 3 S+ 0 0 148 -2,-0.3 -34,-0.2 1,-0.2 3,-0.1 -0.376 108.7 19.6 -61.4 128.7 -5.2 34.5 16.6 67 67 A G T 3 S+ 0 0 40 -36,-2.3 -1,-0.2 1,-0.4 -35,-0.1 0.193 81.1 135.7 92.4 -12.3 -6.2 30.9 17.3 68 68 A E < - 0 0 79 -3,-1.5 -37,-3.3 -38,-0.1 -1,-0.4 -0.395 40.8-157.7 -52.8 145.1 -3.9 29.1 14.8 69 69 A T E -C 30 0A 55 -39,-0.2 2,-0.4 -3,-0.1 -39,-0.2 -0.891 22.7-156.6-130.6 155.6 -2.3 26.2 16.6 70 70 A F E -C 29 0A 44 -41,-2.2 -41,-3.1 -2,-0.3 2,-0.4 -0.978 20.9-165.4-129.6 122.0 0.8 24.0 16.2 71 71 A E E +C 28 0A 103 -2,-0.4 2,-0.3 -43,-0.2 -43,-0.2 -0.913 12.6 167.1-117.0 139.9 0.5 20.6 17.9 72 72 A V E -C 27 0A 13 -45,-2.3 -45,-3.5 -2,-0.4 2,-0.4 -0.993 21.3-152.7-146.6 144.8 3.3 18.1 18.6 73 73 A A E -C 26 0A 51 -2,-0.3 2,-0.4 -47,-0.3 -47,-0.2 -0.969 14.5-156.4-117.3 132.1 3.7 15.0 20.7 74 74 A L + 0 0 2 -49,-1.0 -50,-3.3 -2,-0.4 -49,-0.4 -0.887 18.0 170.8-105.1 140.9 7.1 14.0 22.1 75 75 A S + 0 0 75 -2,-0.4 2,-0.2 -52,-0.3 -1,-0.1 0.758 50.2 86.4-120.2 -37.9 8.1 10.5 23.1 76 76 A N S S- 0 0 78 1,-0.1 22,-0.2 -29,-0.1 2,-0.1 -0.478 79.7-118.4 -65.2 137.1 11.8 10.4 23.8 77 77 A K + 0 0 130 -2,-0.2 2,-0.3 20,-0.1 22,-0.2 -0.416 67.6 63.2 -73.8 147.2 12.6 11.2 27.5 78 78 A G E S- F 0 98B 27 20,-2.4 20,-2.9 -2,-0.1 2,-0.4 -0.810 84.6 -40.9 134.1-171.6 14.8 14.2 28.3 79 79 A E E - F 0 97B 109 -2,-0.3 2,-0.5 18,-0.2 18,-0.2 -0.743 40.8-167.1-100.2 135.6 14.9 18.0 28.0 80 80 A Y E - F 0 96B 1 16,-3.0 16,-3.1 -2,-0.4 2,-0.4 -0.997 4.1-161.2-123.6 116.8 13.8 19.9 24.9 81 81 A S E + F 0 95B 38 -36,-2.2 -39,-1.6 -2,-0.5 2,-0.3 -0.806 19.0 174.3 -94.0 142.3 14.7 23.6 24.6 82 82 A F E -EF 41 94B 4 12,-2.7 12,-2.4 -2,-0.4 2,-0.3 -0.925 8.8-177.1-142.9 166.6 12.6 25.6 22.0 83 83 A Y E -EF 40 93B 30 -43,-2.3 -43,-2.8 -2,-0.3 2,-0.5 -0.969 33.5-109.9-155.3 168.1 12.2 29.1 20.9 84 84 A C > - 0 0 0 8,-2.2 3,-0.5 -2,-0.3 4,-0.3 -0.946 31.6-144.1 -99.5 123.5 10.2 31.4 18.6 85 85 A S G > S+ 0 0 34 -2,-0.5 3,-1.0 1,-0.2 4,-0.3 0.886 94.4 45.0 -64.8 -44.0 12.7 32.5 15.8 86 86 A P G 3 S+ 0 0 64 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.751 124.9 34.6 -71.0 -21.0 11.5 36.1 15.3 87 87 A H G < >S+ 0 0 33 -3,-0.5 5,-2.3 5,-0.2 4,-0.4 0.095 80.7 111.9-117.9 18.8 11.3 36.8 19.0 88 88 A Q T X 5S+ 0 0 92 -3,-1.0 3,-1.3 -4,-0.3 -1,-0.1 0.906 81.7 48.6 -58.5 -41.7 14.3 34.6 20.2 89 89 A G T 3 5S+ 0 0 85 -4,-0.3 -1,-0.2 1,-0.3 -2,-0.1 0.781 103.5 60.2 -73.3 -29.4 16.2 37.8 21.2 90 90 A A T 3 5S- 0 0 70 -3,-0.2 -1,-0.3 2,-0.1 -2,-0.2 0.508 125.7-102.6 -73.0 -7.3 13.2 39.2 23.1 91 91 A G T < 5 + 0 0 45 -3,-1.3 2,-1.8 -4,-0.4 -3,-0.2 0.647 69.2 151.2 92.9 19.8 13.4 36.1 25.3 92 92 A M < + 0 0 0 -5,-2.3 -8,-2.2 -8,-0.2 2,-0.3 -0.597 34.9 123.4 -82.2 81.6 10.5 34.1 23.8 93 93 A V E + F 0 83B 69 -2,-1.8 -79,-0.5 -10,-0.2 2,-0.3 -0.835 33.5 175.9-134.9 165.7 12.1 30.7 24.7 94 94 A G E - F 0 82B 9 -12,-2.4 -12,-2.7 -2,-0.3 2,-0.3 -0.960 18.1-140.5-163.9 174.1 11.0 27.7 26.7 95 95 A K E -dF 18 81B 55 -78,-2.7 -76,-1.3 -2,-0.3 2,-0.4 -0.956 9.5-162.4-149.0 132.4 12.0 24.2 27.7 96 96 A V E -dF 19 80B 0 -16,-3.1 -16,-3.0 -2,-0.3 2,-0.5 -0.954 7.4-152.4-115.1 136.3 9.8 21.0 28.0 97 97 A T E -dF 20 79B 34 -78,-2.4 -76,-2.2 -2,-0.4 2,-0.7 -0.938 1.8-156.3-101.2 124.7 10.9 17.9 30.0 98 98 A V E dF 21 78B 2 -20,-2.9 -20,-2.4 -2,-0.5 -76,-0.2 -0.920 360.0 360.0 -91.5 115.0 9.5 14.5 28.9 99 99 A N 0 0 116 -78,-2.3 -2,-0.0 -2,-0.7 -79,-0.0 -0.842 360.0 360.0-131.3 360.0 9.8 12.4 32.1