==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER COMPLEX (SYNTROPHIN/PEPTIDE) 10-DEC-97 2PDZ . COMPND 2 MOLECULE: SYNTROPHIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR J.SCHULTZ,U.HOFFMUELLER,J.ASHURST,G.KRAUSE,P.SCHMIEDER, . 91 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5598.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 74.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 29.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 18 19.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 217 0, 0.0 2,-0.3 0, 0.0 82,-0.2 0.000 360.0 360.0 360.0 176.4 -6.7 -17.1 8.3 2 2 A R E -A 82 0A 90 80,-2.1 80,-1.8 2,-0.0 2,-0.4 -0.976 360.0-142.9-155.2 168.0 -3.2 -15.9 9.2 3 3 A R E +A 81 0A 177 -2,-0.3 2,-0.4 78,-0.2 78,-0.2 -0.961 20.7 173.8-141.6 121.1 -1.2 -14.1 11.9 4 4 A V E -A 80 0A 4 76,-2.1 76,-3.8 -2,-0.4 2,-0.5 -0.983 15.1-160.0-131.9 139.5 1.6 -11.6 11.2 5 5 A T E -A 79 0A 67 -2,-0.4 2,-0.7 74,-0.3 74,-0.3 -0.941 5.8-165.6-119.1 116.5 3.6 -9.4 13.6 6 6 A V E -A 78 0A 1 72,-2.2 72,-2.5 -2,-0.5 2,-0.3 -0.853 15.0-142.8-103.8 111.6 5.5 -6.4 12.1 7 7 A R E -A 77 0A 184 -2,-0.7 70,-0.2 70,-0.2 69,-0.1 -0.516 18.4-132.9 -71.9 131.2 8.1 -4.9 14.5 8 8 A K S S+ 0 0 103 68,-2.6 -1,-0.1 67,-0.3 68,-0.1 0.387 70.9 60.7 -61.5-151.1 8.2 -1.1 14.2 9 9 A A > + 0 0 66 3,-0.1 3,-0.7 2,-0.1 29,-0.1 -0.004 63.1 96.1 55.6-171.2 11.6 0.7 13.9 10 10 A D T 3 S- 0 0 97 1,-0.2 2,-3.6 27,-0.1 28,-0.3 0.814 108.0 -8.8 58.5 113.3 13.8 -0.1 10.9 11 11 A A T 3 S- 0 0 97 1,-0.1 2,-0.4 26,-0.1 -1,-0.2 -0.243 96.4-122.9 67.3 -62.0 13.5 2.4 8.1 12 12 A G S < S+ 0 0 51 -2,-3.6 -3,-0.1 -3,-0.7 -1,-0.1 -0.616 81.7 83.7 125.5 -74.9 10.4 4.0 9.7 13 13 A G S S- 0 0 43 -2,-0.4 25,-0.8 1,-0.1 -1,-0.5 -0.136 72.5-135.6 -57.6 160.9 7.5 3.8 7.3 14 14 A L - 0 0 14 78,-1.8 25,-1.4 23,-0.2 26,-0.4 0.646 25.8-139.4 -95.4 -16.2 5.6 0.5 7.3 15 15 A G + 0 0 3 77,-0.3 25,-0.4 1,-0.2 2,-0.2 0.948 53.6 124.8 56.0 87.0 5.3 0.2 3.5 16 16 A I - 0 0 0 17,-0.2 76,-2.3 23,-0.1 2,-0.7 -0.678 41.6-164.5-176.3 118.2 1.7 -1.1 3.1 17 17 A S E -B 32 0A 0 15,-2.6 14,-2.3 74,-0.3 15,-1.1 -0.857 17.5-160.3-112.9 101.1 -1.3 0.2 1.1 18 18 A I E -B 30 0A 0 -2,-0.7 72,-1.2 12,-0.2 2,-0.4 -0.466 3.4-162.1 -78.3 151.1 -4.5 -1.5 2.3 19 19 A K E +BC 29 89A 98 10,-2.6 10,-1.5 70,-0.2 2,-0.3 -0.965 44.6 58.0-137.8 122.2 -7.6 -1.5 0.0 20 20 A G E - 0 0 16 68,-1.2 2,-0.2 -2,-0.4 44,-0.1 -0.991 53.3-140.5 159.1-153.1 -11.2 -2.1 1.1 21 21 A G E > > -B 26 0A 4 5,-0.6 3,-2.2 -2,-0.3 5,-0.5 -0.572 27.8-116.6 160.4 133.9 -13.8 -0.6 3.5 22 22 A R G > 5S+ 0 0 105 1,-0.3 3,-0.9 -2,-0.2 41,-0.1 0.722 111.7 70.6 -60.1 -15.4 -16.5 -1.8 5.9 23 23 A E G 3 5S+ 0 0 156 1,-0.2 -1,-0.3 2,-0.1 40,-0.1 0.418 105.2 38.6 -82.7 7.1 -18.9 0.1 3.6 24 24 A N G < 5S- 0 0 107 -3,-2.2 -1,-0.2 2,-0.1 -2,-0.2 0.091 118.3-100.9-140.5 23.8 -18.4 -2.6 0.9 25 25 A K T < 5S+ 0 0 190 -3,-0.9 -3,-0.2 1,-0.2 -2,-0.1 0.985 75.4 138.4 53.9 64.9 -18.1 -5.9 3.0 26 26 A M E < -B 21 0A 47 -5,-0.5 2,-3.0 34,-0.1 -5,-0.6 -0.919 55.7-140.1-145.5 117.8 -14.3 -6.1 2.9 27 27 A P E - 0 0 27 0, 0.0 56,-0.2 0, 0.0 24,-0.2 -0.219 65.7 -84.5 -69.5 54.3 -12.0 -7.0 5.8 28 28 A I E - 0 0 1 -2,-3.0 23,-2.6 22,-0.2 2,-0.6 0.908 58.2-155.1 42.3 88.4 -9.4 -4.3 4.8 29 29 A L E -BD 19 50A 34 -10,-1.5 -10,-2.6 21,-0.3 21,-0.3 -0.831 12.6-123.2-100.9 125.7 -7.4 -6.3 2.1 30 30 A I E +B 18 0A 3 19,-1.5 18,-2.6 -2,-0.6 19,-0.3 -0.355 31.4 173.6 -61.8 136.3 -3.8 -5.3 1.4 31 31 A S E + 0 0 46 -14,-2.3 2,-0.3 1,-0.2 -13,-0.2 0.504 67.1 31.7-122.0 -11.4 -3.3 -4.4 -2.3 32 32 A K E -B 17 0A 84 -15,-1.1 -15,-2.6 14,-0.1 2,-1.1 -0.794 58.0-167.2-151.9 106.8 0.3 -3.1 -2.4 33 33 A I - 0 0 20 -2,-0.3 -17,-0.2 -17,-0.2 14,-0.1 -0.739 23.8-143.0 -95.6 94.7 3.1 -4.3 -0.1 34 34 A F - 0 0 65 -2,-1.1 6,-0.5 1,-0.1 3,-0.4 -0.223 18.8-126.2 -54.3 141.5 5.9 -1.7 -0.5 35 35 A K S S+ 0 0 158 1,-0.2 3,-0.1 4,-0.1 6,-0.1 -0.354 87.4 39.6 -86.4 171.6 9.3 -3.3 -0.5 36 36 A G S S+ 0 0 65 1,-0.2 2,-0.3 4,-0.2 -1,-0.2 0.860 100.2 106.7 60.6 30.9 12.3 -2.3 1.8 37 37 A L S > S- 0 0 35 -3,-0.4 4,-1.9 1,-0.1 -1,-0.2 -0.932 85.8-100.9-138.3 162.6 9.7 -1.8 4.6 38 38 A A H >> S+ 0 0 6 -25,-0.8 3,-0.9 -28,-0.3 4,-0.7 0.952 119.3 46.1 -46.5 -64.1 8.6 -3.6 7.8 39 39 A A H >4>S+ 0 0 1 -25,-1.4 3,-1.0 1,-0.3 6,-0.8 0.942 121.5 37.4 -48.6 -53.8 5.5 -5.2 6.3 40 40 A D H 345S+ 0 0 43 -6,-0.5 3,-0.3 -26,-0.4 -1,-0.3 0.629 118.0 52.5 -77.3 -9.3 7.3 -6.5 3.2 41 41 A Q H <<5S+ 0 0 106 -4,-1.9 -1,-0.2 -3,-0.9 -2,-0.2 0.312 92.8 72.5-107.4 11.0 10.5 -7.2 5.2 42 42 A T T <<5S- 0 0 39 -3,-1.0 -37,-0.2 -4,-0.7 -1,-0.2 0.227 101.6-120.3-106.8 15.6 8.8 -9.4 7.9 43 43 A E T 5S+ 0 0 175 -3,-0.3 -3,-0.1 1,-0.2 3,-0.1 0.945 100.1 54.6 47.7 55.3 8.2 -12.4 5.6 44 44 A A < + 0 0 11 -5,-0.6 2,-2.4 1,-0.1 -1,-0.2 0.135 69.4 92.3-176.6 -47.7 4.4 -12.3 6.1 45 45 A L + 0 0 4 -6,-0.8 2,-0.3 -7,-0.2 -2,-0.1 -0.397 59.1 154.3 -67.9 82.4 2.9 -8.9 5.3 46 46 A F - 0 0 45 -2,-2.4 -16,-0.2 1,-0.1 -14,-0.1 -0.841 50.3 -92.3-112.9 150.0 2.1 -9.8 1.7 47 47 A V S S+ 0 0 64 -2,-0.3 -16,-0.2 1,-0.2 -1,-0.1 0.022 108.1 52.8 -50.2 167.7 -0.6 -8.3 -0.5 48 48 A G S S+ 0 0 15 -18,-2.6 37,-2.9 1,-0.2 2,-0.7 0.853 77.7 137.5 70.9 30.2 -4.0 -10.2 -0.5 49 49 A D E - E 0 84A 0 -19,-0.3 -19,-1.5 35,-0.2 2,-0.9 -0.842 41.7-159.6-114.1 99.6 -4.0 -9.9 3.3 50 50 A A E -DE 29 83A 0 33,-1.6 33,-2.0 -2,-0.7 2,-0.3 -0.633 16.6-147.7 -78.4 107.1 -7.4 -9.0 4.7 51 51 A I E + E 0 82A 2 -23,-2.6 31,-0.3 -2,-0.9 3,-0.1 -0.573 25.2 173.3 -77.5 134.3 -6.6 -7.7 8.2 52 52 A L E + 0 0 44 29,-1.7 8,-1.3 1,-0.3 7,-0.9 0.300 69.5 18.1-120.9 7.3 -9.3 -8.4 10.9 53 53 A S E -FE 58 81A 25 28,-0.8 28,-2.8 5,-0.3 2,-0.5 -0.811 57.6-159.7-175.8 131.9 -7.4 -7.1 13.9 54 54 A V E S- E 0 80A 3 3,-1.1 26,-0.2 -2,-0.2 25,-0.1 -0.940 82.3 -20.5-123.9 114.0 -4.4 -4.9 14.6 55 55 A N S S- 0 0 74 24,-4.3 -1,-0.1 -2,-0.5 25,-0.1 0.869 135.8 -41.0 60.6 34.3 -2.6 -5.1 18.0 56 56 A G S S+ 0 0 68 23,-0.4 2,-0.8 1,-0.2 -1,-0.2 0.725 108.6 130.8 87.0 21.0 -5.7 -6.7 19.5 57 57 A E - 0 0 69 10,-0.0 -3,-1.1 3,-0.0 2,-0.3 -0.713 56.1-141.0-109.5 84.9 -8.1 -4.3 17.6 58 58 A D B > -F 53 0A 89 -2,-0.8 3,-0.7 -5,-0.2 -5,-0.3 -0.147 21.7-177.7 -44.6 97.9 -10.8 -6.5 16.0 59 59 A L G > + 0 0 2 -7,-0.9 3,-3.3 -2,-0.3 -6,-0.2 0.599 58.6 98.7 -79.1 -8.8 -11.1 -4.5 12.7 60 60 A S G 3 S+ 0 0 46 -8,-1.3 -1,-0.2 1,-0.3 -34,-0.1 0.869 94.1 35.8 -47.0 -36.2 -13.9 -6.9 11.5 61 61 A S G < S+ 0 0 93 -3,-0.7 2,-0.3 -9,-0.2 -1,-0.3 0.000 106.1 94.7-106.8 29.9 -16.3 -4.2 12.7 62 62 A A S < S- 0 0 5 -3,-3.3 -34,-0.1 -5,-0.1 -40,-0.1 -0.877 71.0-122.4-119.7 153.7 -14.1 -1.2 11.7 63 63 A T > - 0 0 62 -2,-0.3 4,-1.7 -42,-0.1 3,-0.5 -0.362 40.9 -92.7 -86.3 171.6 -14.0 0.9 8.5 64 64 A H H > S+ 0 0 3 1,-0.2 4,-1.6 2,-0.2 5,-0.2 0.814 130.3 54.4 -55.3 -24.6 -11.0 1.3 6.2 65 65 A D H > S+ 0 0 80 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.895 103.9 52.1 -77.1 -38.2 -10.2 4.4 8.3 66 66 A E H > S+ 0 0 87 -3,-0.5 4,-0.9 1,-0.2 -2,-0.2 0.806 111.6 48.8 -67.9 -25.9 -10.3 2.5 11.6 67 67 A A H X S+ 0 0 0 -4,-1.7 4,-1.8 2,-0.2 -1,-0.2 0.884 111.5 46.2 -81.9 -38.8 -7.8 -0.0 10.2 68 68 A V H X S+ 0 0 20 -4,-1.6 4,-1.4 -5,-0.2 -2,-0.2 0.823 105.7 62.5 -73.3 -27.4 -5.3 2.6 8.9 69 69 A Q H X S+ 0 0 130 -4,-1.8 4,-2.1 2,-0.2 -1,-0.2 0.910 105.9 44.9 -65.1 -38.2 -5.5 4.5 12.1 70 70 A A H < S+ 0 0 22 -4,-0.9 -2,-0.2 1,-0.2 -1,-0.2 0.964 111.9 50.7 -70.3 -48.5 -4.1 1.5 14.0 71 71 A L H < S+ 0 0 2 -4,-1.8 3,-0.5 1,-0.2 -1,-0.2 0.784 111.3 52.6 -59.6 -22.5 -1.4 0.9 11.4 72 72 A K H < S+ 0 0 164 -4,-1.4 2,-0.3 1,-0.2 -1,-0.2 0.924 121.3 27.8 -80.1 -45.1 -0.6 4.6 11.8 73 73 A K S < S+ 0 0 181 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 -0.443 88.0 155.2-112.7 59.8 -0.2 4.6 15.6 74 74 A T - 0 0 19 -3,-0.5 4,-0.1 -2,-0.3 2,-0.1 -0.228 38.5-117.2 -78.1 174.2 0.9 0.9 16.2 75 75 A G - 0 0 29 2,-0.3 -67,-0.3 4,-0.0 -1,-0.1 -0.277 48.4 -69.6 -99.9-169.5 2.9 -0.2 19.3 76 76 A K S S+ 0 0 167 1,-0.2 -68,-2.6 -69,-0.1 2,-0.6 0.944 129.3 35.4 -48.4 -52.1 6.4 -1.7 19.4 77 77 A E E S-A 7 0A 109 -70,-0.2 2,-1.9 2,-0.0 -2,-0.3 -0.895 78.9-148.6-107.7 117.2 5.2 -4.9 17.8 78 78 A V E -A 6 0A 0 -72,-2.5 -72,-2.2 -2,-0.6 2,-0.6 -0.506 17.0-169.4 -83.1 78.6 2.5 -4.5 15.2 79 79 A V E -A 5 0A 57 -2,-1.9 -24,-4.3 -74,-0.3 2,-0.6 -0.531 10.0-176.5 -68.5 112.5 0.6 -7.8 15.7 80 80 A L E -AE 4 54A 1 -76,-3.8 -76,-2.1 -2,-0.6 2,-0.3 -0.916 21.0-145.0-119.9 115.8 -1.8 -7.9 12.7 81 81 A E E -AE 3 53A 55 -28,-2.8 -29,-1.7 -2,-0.6 -28,-0.8 -0.568 28.6-170.9 -73.6 128.6 -4.4 -10.6 12.2 82 82 A V E -AE 2 51A 3 -80,-1.8 -80,-2.1 -2,-0.3 2,-0.7 -0.942 27.8-151.1-127.2 150.3 -4.6 -11.3 8.5 83 83 A K E - E 0 50A 104 -33,-2.0 -33,-1.6 -2,-0.4 -32,-0.1 -0.784 26.6-144.7-115.6 85.0 -7.0 -13.4 6.3 84 84 A Y E - E 0 49A 90 -2,-0.7 -35,-0.2 -35,-0.2 -36,-0.1 -0.235 12.0-166.3 -51.6 130.6 -4.8 -14.4 3.3 85 85 A M 0 0 80 -37,-2.9 -1,-0.1 -38,-0.1 -36,-0.1 -0.336 360.0 360.0-115.5 51.7 -6.9 -14.4 0.1 86 86 A K 0 0 226 -38,-0.1 -38,-0.0 -2,-0.0 -37,-0.0 0.298 360.0 360.0 -73.1 360.0 -4.5 -16.3 -2.2 87 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 88 3 B K 0 0 131 0, 0.0 -68,-1.2 0, 0.0 2,-0.6 0.000 360.0 360.0 360.0 119.1 -10.1 3.4 -0.3 89 4 B E B +C 19 0A 99 -70,-0.2 -70,-0.2 2,-0.0 2,-0.0 -0.814 360.0 167.7-121.5 94.3 -6.3 2.8 -0.9 90 5 B S - 0 0 45 -72,-1.2 2,-0.2 -2,-0.6 -25,-0.0 -0.170 25.3-140.5 -91.3-169.5 -4.2 4.3 1.9 91 6 B L 0 0 95 -74,-0.2 -74,-0.3 1,-0.1 -76,-0.1 -0.647 360.0 360.0-157.8 94.8 -0.4 3.7 2.6 92 7 B V 0 0 33 -76,-2.3 -78,-1.8 -2,-0.2 -77,-0.3 0.739 360.0 360.0 -88.3 360.0 0.9 3.3 6.1