==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NUCLEOTIDYLTRANSFERASE 10-JUN-96 1PEH . COMPND 2 MOLECULE: PEPNH1; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR S.J.DUNNE,R.B.CORNELL,J.E.JOHNSON,N.R.GLOVER,A.S.TRACEY . 33 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4387.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 27.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 30.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 236 A N 0 0 198 0, 0.0 4,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 12.4 -25.1 -4.9 6.2 2 237 A E >> + 0 0 157 1,-0.2 3,-0.9 2,-0.1 4,-0.8 0.835 360.0 68.0 -79.6 -38.5 -22.6 -2.2 7.4 3 238 A K T 34 S+ 0 0 189 1,-0.2 -1,-0.2 2,-0.1 0, 0.0 0.860 92.5 61.3 -49.7 -40.1 -20.9 -4.4 9.9 4 239 A K T 34 S+ 0 0 157 1,-0.1 -1,-0.2 3,-0.0 -2,-0.1 0.891 117.1 26.0 -52.8 -45.9 -19.5 -6.6 7.1 5 240 A Y T <4 + 0 0 156 -3,-0.9 -2,-0.1 -4,-0.4 -3,-0.1 0.944 61.0 138.5 -86.1 -86.4 -17.5 -3.7 5.7 6 241 A H < + 0 0 141 -4,-0.8 2,-0.5 1,-0.2 3,-0.4 0.821 30.2 146.6 29.6 47.9 -16.6 -0.9 8.1 7 242 A L + 0 0 51 1,-0.2 -1,-0.2 3,-0.1 3,-0.1 -0.387 26.7 107.8-104.6 50.2 -13.2 -0.8 6.3 8 243 A Q S S+ 0 0 159 -2,-0.5 -1,-0.2 1,-0.1 -2,-0.1 0.725 79.6 41.3 -97.7 -29.9 -12.5 2.9 6.7 9 244 A E S S+ 0 0 176 -3,-0.4 -1,-0.1 3,-0.1 -2,-0.1 -0.104 127.4 30.8-111.2 35.2 -9.8 2.9 9.3 10 245 A R S > S+ 0 0 187 -3,-0.1 4,-1.1 3,-0.0 -2,-0.1 0.294 113.8 55.3-150.8 -43.5 -7.9 -0.1 8.0 11 246 A V T 4 S+ 0 0 65 1,-0.2 -2,-0.1 2,-0.2 -3,-0.1 0.264 107.3 56.3 -82.0 11.3 -8.5 0.0 4.2 12 247 A D T >> S+ 0 0 102 2,-0.1 3,-1.0 3,-0.1 4,-0.6 0.755 102.8 48.4-106.4 -50.7 -7.1 3.6 4.2 13 248 A K G >4 S+ 0 0 136 1,-0.2 3,-0.9 2,-0.2 -2,-0.2 0.840 104.1 63.0 -59.6 -35.4 -3.7 3.1 5.8 14 249 A V G >< S+ 0 0 91 -4,-1.1 3,-1.2 1,-0.3 4,-0.4 0.722 91.0 66.6 -67.1 -21.2 -3.0 0.2 3.4 15 250 A K G X4 S+ 0 0 151 -3,-1.0 3,-0.6 1,-0.3 4,-0.4 0.831 99.0 51.3 -68.5 -31.4 -3.2 2.6 0.5 16 251 A K G << S+ 0 0 161 -3,-0.9 -1,-0.3 -4,-0.6 -2,-0.2 0.104 99.1 68.5 -92.5 23.3 -0.1 4.3 1.7 17 252 A K G <> S+ 0 0 137 -3,-1.2 4,-1.3 2,-0.1 -1,-0.2 0.510 90.3 57.5-113.6 -14.5 1.8 1.0 1.9 18 253 A V T <4 S+ 0 0 84 -3,-0.6 -2,-0.1 -4,-0.4 -3,-0.1 0.715 104.1 53.6 -85.2 -24.9 2.0 0.2 -1.8 19 254 A K T >4 S+ 0 0 135 -4,-0.4 3,-0.6 2,-0.2 -1,-0.1 0.857 110.0 47.9 -73.4 -39.4 3.8 3.5 -2.4 20 255 A D G >> S+ 0 0 117 1,-0.2 3,-1.3 2,-0.2 4,-0.8 0.925 112.4 47.7 -66.0 -49.4 6.3 2.5 0.2 21 256 A V G 3< S+ 0 0 111 -4,-1.3 -1,-0.2 1,-0.3 -2,-0.2 0.333 109.6 56.8 -77.6 9.3 6.7 -0.9 -1.3 22 257 A E G <4 S+ 0 0 135 -3,-0.6 -1,-0.3 2,-0.1 -2,-0.2 0.125 96.5 62.1-123.0 16.2 7.1 0.7 -4.7 23 258 A E T <> S+ 0 0 129 -3,-1.3 4,-0.8 2,-0.1 3,-0.4 0.637 94.8 58.9-108.4 -29.8 10.0 2.9 -3.7 24 259 A K T < S+ 0 0 179 -4,-0.8 -3,-0.1 1,-0.2 -2,-0.1 0.212 101.5 58.8 -84.7 15.6 12.4 0.1 -2.9 25 260 A S T >> S+ 0 0 79 2,-0.1 3,-0.7 3,-0.1 4,-0.7 0.564 93.4 62.4-112.0 -24.8 12.0 -1.1 -6.5 26 261 A K H >> S+ 0 0 119 -3,-0.4 4,-0.8 1,-0.2 3,-0.8 0.877 97.6 59.1 -67.2 -38.0 13.2 2.0 -8.2 27 262 A E H 3< S+ 0 0 139 -4,-0.8 4,-0.4 1,-0.2 -1,-0.2 0.599 98.0 62.9 -66.5 -10.1 16.6 1.5 -6.6 28 263 A W H <> S+ 0 0 140 -3,-0.7 4,-1.6 2,-0.2 3,-0.3 0.796 96.5 53.4 -87.1 -30.3 16.8 -1.8 -8.4 29 264 A V H