==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRUS 06-APR-94 1PFI . COMPND 2 MOLECULE: MAJOR COAT PROTEIN OF PF1 VIRUS; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PF1; . AUTHOR D.J.LIU,L.A.DAY . 92 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8365.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 84 91.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 70 76.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 86 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 27.5 17.8 -21.3 58.0 2 2 A V > + 0 0 119 3,-0.2 4,-0.9 4,-0.1 5,-0.1 0.697 360.0 47.0-114.8 -39.8 20.5 -18.7 56.8 3 3 A I H >> S+ 0 0 150 2,-0.2 4,-1.2 3,-0.1 3,-0.7 0.958 134.8 6.8 -65.1 -91.0 23.7 -20.9 56.6 4 4 A D H 3> S+ 0 0 128 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.730 128.8 66.7 -65.0 -20.6 22.9 -24.2 54.7 5 5 A T H 3> S+ 0 0 61 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.892 99.5 48.4 -64.9 -40.0 19.4 -22.6 54.1 6 6 A S H < S+ 0 0 35 -4,-2.4 3,-1.3 1,-0.2 4,-0.3 0.882 117.2 48.9 -75.0 -40.0 17.6 -25.7 39.4 16 16 A Q T 3X S+ 0 0 92 -4,-3.9 4,-1.0 1,-0.2 3,-0.4 0.533 92.9 81.5 -75.0 -5.0 14.3 -23.6 39.1 17 17 A G H 3> S+ 0 0 28 -4,-0.4 4,-2.1 1,-0.2 -1,-0.2 0.717 79.7 66.8 -69.9 -20.1 16.3 -21.5 36.5 18 18 A D H <> S+ 0 0 107 -3,-1.3 4,-2.4 1,-0.2 -1,-0.2 0.892 98.7 50.0 -65.1 -39.9 15.4 -24.3 33.9 19 19 A M H > S+ 0 0 117 -3,-0.4 4,-2.4 -4,-0.3 -1,-0.2 0.892 111.2 48.4 -65.1 -40.0 11.6 -23.3 34.2 20 20 A K H X S+ 0 0 133 -4,-1.0 4,-0.6 2,-0.2 -2,-0.2 0.915 113.6 47.3 -64.9 -40.1 12.4 -19.5 33.6 21 21 A A H >< S+ 0 0 78 -4,-2.1 3,-0.6 1,-0.2 -2,-0.2 0.890 113.3 48.4 -65.0 -40.0 14.7 -20.4 30.5 22 22 A I H >< S+ 0 0 104 -4,-2.4 3,-2.4 1,-0.2 4,-0.3 0.894 104.5 58.6 -65.0 -40.0 11.9 -22.8 29.2 23 23 A G H >X S+ 0 0 23 -4,-2.4 4,-1.2 1,-0.3 3,-1.1 0.728 87.6 78.0 -60.1 -20.0 9.2 -19.9 29.7 24 24 A G H S+ 0 0 129 -3,-1.1 3,-0.6 -4,-0.3 4,-0.5 0.892 112.7 48.3 -64.9 -40.0 6.4 -18.2 25.2 27 27 A V H >X S+ 0 0 105 -4,-1.2 3,-0.8 1,-0.2 4,-0.6 0.891 111.2 49.5 -65.1 -39.9 8.2 -14.8 25.0 28 28 A G H 3X S+ 0 0 22 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.538 94.0 80.6 -75.0 -5.0 10.0 -15.8 21.7 29 29 A A H <> S+ 0 0 44 -3,-0.6 4,-2.3 -4,-0.2 -1,-0.2 0.889 91.0 48.4 -65.0 -40.1 6.4 -16.9 20.5 30 30 A L H + 0 0 122 3,-0.2 4,-0.9 4,-0.1 5,-0.1 0.696 360.0 47.0-114.9 -39.8 25.4 11.0 59.9 50 3 B I H >> S+ 0 0 153 2,-0.2 4,-1.2 3,-0.1 3,-0.7 0.958 134.9 6.8 -65.1 -91.0 28.7 13.1 59.7 51 4 B D H 3> S+ 0 0 127 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.730 128.8 66.7 -65.1 -20.6 31.4 11.0 57.8 52 5 B T H 3> S+ 0 0 60 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.892 99.5 48.4 -64.9 -40.0 28.5 8.5 57.1 53 6 B S H < S+ 0 0 35 -4,-2.4 3,-1.3 1,-0.2 4,-0.3 0.882 117.2 48.9 -75.0 -40.0 30.7 5.6 42.4 63 16 B Q T 3X S+ 0 0 90 -4,-3.9 4,-1.0 1,-0.2 3,-0.4 0.533 92.9 81.4 -75.0 -5.0 27.4 3.4 42.2 64 17 B G H 3> S+ 0 0 29 -4,-0.4 4,-2.1 1,-0.2 -1,-0.2 0.718 79.7 66.8 -70.0 -20.0 26.3 6.1 39.5 65 18 B D H <> S+ 0 0 105 -3,-1.3 4,-2.4 1,-0.2 -1,-0.2 0.892 98.7 50.0 -65.1 -39.9 28.4 4.1 37.0 66 19 B M H > S+ 0 0 119 -3,-0.4 4,-2.4 -4,-0.3 -1,-0.2 0.892 111.2 48.4 -65.1 -40.0 26.0 1.1 37.2 67 20 B K H X S+ 0 0 136 -4,-1.0 4,-0.6 2,-0.2 -2,-0.2 0.915 113.6 47.3 -64.9 -40.1 22.9 3.4 36.6 68 21 B A H >< S+ 0 0 77 -4,-2.1 3,-0.6 1,-0.2 -2,-0.2 0.890 113.3 48.4 -65.0 -40.0 24.6 5.1 33.6 69 22 B I H >< S+ 0 0 106 -4,-2.4 3,-2.4 1,-0.2 4,-0.3 0.895 104.5 58.6 -65.0 -40.0 25.6 1.5 32.2 70 23 B G H >X S+ 0 0 23 -4,-2.4 4,-1.2 1,-0.3 3,-1.1 0.728 87.6 78.1 -60.2 -19.9 22.0 0.3 32.7 71 24 B G H S+ 0 0 128 -3,-1.1 3,-0.6 -4,-0.3 4,-0.5 0.892 112.7 48.3 -64.9 -40.0 19.3 -1.6 28.2 74 27 B V H >X S+ 0 0 106 -4,-1.2 3,-0.8 1,-0.2 4,-0.6 0.891 111.1 49.5 -65.1 -39.9 16.9 1.5 28.1 75 28 B G H 3X S+ 0 0 21 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.537 94.0 80.6 -75.0 -5.0 18.5 2.7 24.8 76 29 B A H <> S+ 0 0 44 -3,-0.6 4,-2.2 -4,-0.2 -1,-0.2 0.890 90.9 48.4 -65.0 -40.1 18.0 -1.0 23.6 77 30 B L H