==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-APR-07 2PK8 . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN PF0899; . SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS DSM 3638; . AUTHOR Z.J.LIU,W.TEMPEL,L.CHEN,A.SHAH,D.LEE,L.L.CLANCY-KELLEY,B.D.D . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5590.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 71.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 14.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 36.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A S > 0 0 123 0, 0.0 4,-2.0 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 119.4 5.1 11.7 29.7 2 3 A T H > + 0 0 34 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.828 360.0 57.5 -69.1 -26.7 3.5 10.8 26.4 3 4 A R H > S+ 0 0 170 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.919 106.6 49.1 -63.2 -42.9 1.1 13.7 26.8 4 5 A G H > S+ 0 0 32 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.851 109.1 52.9 -61.7 -40.4 4.2 16.0 27.1 5 6 A D H X S+ 0 0 34 -4,-2.0 4,-2.3 2,-0.2 -1,-0.2 0.871 110.4 47.1 -61.2 -42.0 5.6 14.4 24.0 6 7 A L H X S+ 0 0 17 -4,-2.0 4,-2.6 2,-0.2 5,-0.2 0.919 111.4 50.1 -69.4 -37.9 2.4 15.1 22.1 7 8 A I H X S+ 0 0 128 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.919 112.4 49.5 -63.5 -42.4 2.3 18.7 23.3 8 9 A R H X S+ 0 0 69 -4,-2.4 4,-2.5 2,-0.2 -2,-0.2 0.909 111.8 46.7 -60.9 -49.1 6.0 19.1 22.2 9 10 A I H X S+ 0 0 0 -4,-2.3 4,-2.3 2,-0.2 5,-0.2 0.923 113.4 47.5 -65.5 -44.9 5.4 17.7 18.8 10 11 A L H X S+ 0 0 73 -4,-2.6 4,-2.2 1,-0.2 -1,-0.2 0.911 113.1 50.8 -62.6 -38.8 2.2 19.8 18.1 11 12 A G H X S+ 0 0 41 -4,-2.3 4,-2.1 -5,-0.2 -2,-0.2 0.885 110.2 47.6 -65.0 -43.4 4.1 22.8 19.3 12 13 A E H X S+ 0 0 51 -4,-2.5 4,-2.2 2,-0.2 5,-0.2 0.912 112.1 49.7 -67.7 -39.9 7.1 22.2 17.0 13 14 A I H X S+ 0 0 0 -4,-2.3 4,-3.0 2,-0.2 -2,-0.2 0.936 111.7 49.5 -61.3 -44.4 4.8 21.6 14.0 14 15 A E H X S+ 0 0 41 -4,-2.2 4,-2.7 1,-0.2 -1,-0.2 0.883 109.4 52.1 -62.0 -43.5 2.9 24.9 14.8 15 16 A E H X S+ 0 0 100 -4,-2.1 4,-2.2 2,-0.2 -1,-0.2 0.890 112.2 43.9 -60.2 -47.4 6.1 26.8 15.1 16 17 A K H X S+ 0 0 43 -4,-2.2 4,-2.3 2,-0.2 -2,-0.2 0.901 113.0 53.0 -66.9 -38.7 7.4 25.6 11.6 17 18 A M H X S+ 0 0 14 -4,-3.0 4,-2.6 1,-0.2 -2,-0.2 0.952 111.6 46.2 -57.3 -47.9 4.0 26.2 10.1 18 19 A N H X S+ 0 0 96 -4,-2.7 4,-2.4 1,-0.2 -2,-0.2 0.888 109.8 53.5 -61.7 -42.0 4.1 29.8 11.5 19 20 A E H X S+ 0 0 61 -4,-2.2 4,-1.1 2,-0.2 -1,-0.2 0.899 112.5 45.2 -60.0 -44.6 7.7 30.3 10.3 20 21 A L H <>S+ 0 0 0 -4,-2.3 5,-2.4 2,-0.2 3,-0.3 0.920 111.5 50.8 -65.6 -48.1 6.6 29.3 6.7 21 22 A K H ><5S+ 0 0 108 -4,-2.6 3,-1.5 1,-0.2 -2,-0.2 0.881 107.5 54.1 -53.4 -46.4 3.4 31.4 6.7 22 23 A M H 3<5S+ 0 0 178 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.825 106.4 53.3 -61.0 -31.1 5.4 34.5 7.8 23 24 A D T 3<5S- 0 0 115 -4,-1.1 -1,-0.3 -3,-0.3 -2,-0.2 0.455 127.7 -98.8 -81.1 -3.8 7.8 33.9 4.8 24 25 A G T < 5S+ 0 0 70 -3,-1.5 -3,-0.2 1,-0.3 -2,-0.1 0.441 81.8 129.5 99.4 2.9 4.8 33.9 2.4 25 26 A F < - 0 0 25 -5,-2.4 -1,-0.3 -6,-0.1 -2,-0.0 -0.400 54.2-138.1 -84.4 163.7 4.4 30.1 2.1 26 27 A N - 0 0 110 -2,-0.1 52,-0.3 60,-0.1 51,-0.2 -0.841 19.8-147.5-122.4 87.6 1.2 28.0 2.5 27 28 A P + 0 0 7 0, 0.0 49,-0.3 0, 0.0 3,-0.1 -0.405 33.6 155.0 -60.1 123.5 2.1 24.9 4.5 28 29 A D + 0 0 55 47,-2.0 33,-2.1 1,-0.3 2,-0.3 0.565 55.3 33.5-123.4 -21.2 -0.2 22.0 3.3 29 30 A I E -aB 61 75A 30 46,-1.6 46,-3.2 31,-0.2 2,-0.5 -0.985 53.7-153.3-142.6 146.8 1.7 18.8 4.1 30 31 A I E -aB 62 74A 0 31,-2.7 33,-2.3 -2,-0.3 2,-0.5 -0.989 18.7-147.6-121.7 118.5 4.1 17.3 6.7 31 32 A L E -aB 63 73A 31 42,-3.4 42,-2.4 -2,-0.5 2,-0.4 -0.769 15.3-158.4 -83.7 130.1 6.3 14.5 5.4 32 33 A F E -aB 64 72A 0 31,-2.6 33,-2.4 -2,-0.5 40,-0.2 -0.916 11.8-132.4-112.9 137.2 7.2 11.8 8.1 33 34 A G > - 0 0 0 38,-2.6 4,-2.6 -2,-0.4 33,-0.3 -0.268 36.9-103.5 -68.8 166.8 10.1 9.4 8.2 34 35 A R H > S+ 0 0 72 32,-2.0 4,-2.4 2,-0.2 5,-0.2 0.965 122.7 41.7 -59.1 -55.0 9.2 5.8 9.0 35 36 A E H > S+ 0 0 106 31,-0.3 4,-2.3 1,-0.2 35,-0.3 0.892 114.8 52.9 -61.7 -39.2 10.5 5.9 12.6 36 37 A A H > S+ 0 0 0 33,-2.7 4,-2.4 35,-0.3 -1,-0.2 0.910 110.1 47.7 -60.7 -42.7 8.9 9.4 13.0 37 38 A Y H X S+ 0 0 27 -4,-2.6 4,-2.8 32,-0.3 5,-0.2 0.922 111.4 49.3 -68.3 -45.8 5.5 8.2 11.8 38 39 A N H X S+ 0 0 74 -4,-2.4 4,-2.7 -5,-0.2 -1,-0.2 0.905 110.6 51.7 -59.0 -43.9 5.5 5.1 14.0 39 40 A F H X S+ 0 0 51 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.932 114.5 41.1 -56.7 -53.1 6.5 7.3 17.0 40 41 A L H X S+ 0 0 1 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.860 114.0 54.2 -65.6 -37.8 3.6 9.8 16.5 41 42 A S H X S+ 0 0 10 -4,-2.8 4,-2.9 2,-0.2 5,-0.2 0.923 108.8 48.0 -64.8 -42.2 1.2 6.9 15.6 42 43 A N H X S+ 0 0 106 -4,-2.7 4,-2.1 1,-0.2 -1,-0.2 0.909 112.1 50.1 -64.1 -39.4 1.9 5.1 18.9 43 44 A L H X S+ 0 0 11 -4,-1.9 4,-2.6 -5,-0.2 5,-0.2 0.923 113.1 45.2 -62.8 -45.4 1.5 8.4 20.8 44 45 A L H X S+ 0 0 15 -4,-2.5 4,-2.8 2,-0.2 5,-0.4 0.877 110.3 53.0 -74.4 -38.1 -1.9 9.1 19.1 45 46 A K H X>S+ 0 0 70 -4,-2.9 4,-0.9 -5,-0.2 5,-0.6 0.923 115.8 42.7 -55.1 -45.6 -3.2 5.5 19.5 46 47 A K H <5S+ 0 0 133 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.928 122.1 37.2 -65.9 -47.6 -2.4 5.8 23.2 47 48 A E H <5S+ 0 0 40 -4,-2.6 -3,-0.2 1,-0.2 -2,-0.2 0.879 124.6 37.4 -77.3 -42.0 -3.6 9.4 23.8 48 49 A M H <5S- 0 0 85 -4,-2.8 -1,-0.2 -5,-0.2 -3,-0.2 0.607 95.6-137.0 -83.9 -14.5 -6.7 9.3 21.5 49 50 A E T <5 + 0 0 176 -4,-0.9 2,-0.3 -5,-0.4 -3,-0.2 0.941 64.1 124.5 48.4 52.5 -7.5 5.7 22.4 50 51 A E < - 0 0 126 -5,-0.6 -1,-0.2 -6,-0.4 -2,-0.1 -0.851 67.6-127.8-131.1 161.9 -8.3 5.1 18.7 51 52 A E + 0 0 62 -2,-0.3 -6,-0.1 1,-0.2 3,-0.1 0.698 53.5 173.5 -87.9 -20.0 -6.8 2.5 16.4 52 53 A G - 0 0 38 1,-0.2 -1,-0.2 -8,-0.1 2,-0.2 -0.415 57.2-155.9 81.0-167.7 -5.6 4.8 13.5 53 54 A P - 0 0 107 0, 0.0 2,-0.5 0, 0.0 -1,-0.2 0.573 42.7-142.4 -74.8 163.8 -4.1 5.1 10.9 54 55 A F + 0 0 26 -2,-0.2 3,-0.1 1,-0.1 -13,-0.1 -0.867 29.7 166.4-106.1 124.6 -3.4 8.9 11.3 55 56 A T + 0 0 68 -2,-0.5 7,-2.6 1,-0.2 2,-0.3 0.469 60.8 38.8-118.4 -9.3 -3.6 11.0 8.2 56 57 A H E +C 61 0A 112 5,-0.3 2,-0.3 -27,-0.1 5,-0.2 -0.984 50.6 172.6-143.0 147.9 -3.6 14.7 9.5 57 58 A V E > S+C 60 0A 13 3,-2.1 3,-2.2 -2,-0.3 -27,-0.0 -0.943 73.1 5.0-150.2 143.4 -1.9 16.6 12.3 58 59 A S T 3 S- 0 0 28 -2,-0.3 3,-0.1 1,-0.3 -41,-0.0 0.813 128.2 -60.5 53.0 37.5 -2.0 20.3 13.0 59 60 A N T 3 S+ 0 0 164 1,-0.2 2,-0.3 -31,-0.0 -1,-0.3 0.614 117.7 101.3 66.4 14.0 -4.6 21.0 10.2 60 61 A I E < S- C 0 57A 6 -3,-2.2 -3,-2.1 -30,-0.0 2,-0.4 -0.851 77.4 -99.7-125.4 163.9 -2.1 19.6 7.6 61 62 A K E -aC 29 56A 63 -33,-2.1 -31,-2.7 -2,-0.3 2,-0.4 -0.672 27.8-135.9 -89.5 130.8 -1.9 16.3 5.7 62 63 A I E +a 30 0A 5 -7,-2.6 2,-0.3 -2,-0.4 -31,-0.2 -0.730 27.0 174.5 -82.2 128.4 0.6 13.6 6.8 63 64 A E E -a 31 0A 86 -33,-2.3 -31,-2.6 -2,-0.4 2,-0.4 -0.983 27.8-121.0-130.0 150.7 2.5 11.9 4.0 64 65 A I E +a 32 0A 62 -2,-0.3 2,-0.4 -33,-0.2 -31,-0.2 -0.722 27.7 173.5 -93.8 130.5 5.3 9.3 4.5 65 66 A L > - 0 0 75 -33,-2.4 3,-2.3 -2,-0.4 4,-0.2 -0.856 20.6-161.2-125.6 93.7 8.7 9.8 3.1 66 67 A E G > S+ 0 0 98 -2,-0.4 -32,-2.0 1,-0.3 3,-1.5 0.779 80.3 65.3 -49.9 -37.8 10.3 6.7 4.7 67 68 A E G 3 S+ 0 0 164 1,-0.3 -1,-0.3 -34,-0.2 -34,-0.1 0.527 79.1 80.9 -67.5 -11.3 13.9 8.0 4.4 68 69 A L G X S- 0 0 20 -3,-2.3 3,-2.0 1,-0.2 -35,-0.3 0.570 77.6-169.0 -73.2 -5.9 13.4 10.9 6.8 69 70 A G T < - 0 0 19 -3,-1.5 -33,-2.7 1,-0.3 -32,-0.3 -0.338 66.2 -5.1 63.5-128.4 13.9 8.5 9.7 70 71 A G T 3 S+ 0 0 13 -35,-0.3 22,-2.3 -34,-0.1 23,-1.9 0.315 122.9 85.8 -82.6 11.7 13.0 10.0 13.1 71 72 A D E < - D 0 91A 38 -3,-2.0 -38,-2.6 20,-0.2 2,-0.3 -0.623 58.1-157.6-110.1 163.9 12.4 13.5 11.4 72 73 A A E -BD 32 90A 0 18,-2.6 18,-3.4 -40,-0.2 2,-0.4 -0.939 7.3-148.1-134.4 158.6 9.5 15.2 9.7 73 74 A V E -BD 31 89A 14 -42,-2.4 -42,-3.4 -2,-0.3 2,-0.4 -0.985 6.0-148.6-135.1 116.4 9.4 18.1 7.2 74 75 A V E -BD 30 88A 0 14,-2.9 14,-2.0 -2,-0.4 2,-0.3 -0.704 31.6-177.8 -80.0 130.1 6.6 20.6 6.9 75 76 A I E -BD 29 87A 8 -46,-3.2 -47,-2.0 -2,-0.4 -46,-1.6 -0.937 42.0-136.0-130.3 156.4 6.3 21.7 3.3 76 77 A D >> - 0 0 11 10,-2.1 4,-1.1 -2,-0.3 3,-0.7 -0.965 30.2-166.6 -96.8 102.5 4.4 24.1 1.0 77 78 A S T 34 S+ 0 0 53 -2,-0.7 -1,-0.1 1,-0.2 9,-0.0 0.693 78.3 63.2 -72.5 -19.2 4.0 21.4 -1.8 78 79 A K T 34 S+ 0 0 169 -52,-0.3 -1,-0.2 1,-0.2 8,-0.0 0.860 118.0 24.4 -70.9 -37.3 2.9 23.9 -4.4 79 80 A V T X> S+ 0 0 28 -3,-0.7 3,-2.5 7,-0.1 4,-2.0 0.393 85.5 130.5-110.1 4.0 6.3 25.8 -4.4 80 81 A L T 3< S+ 0 0 83 -4,-1.1 -5,-0.0 1,-0.3 -3,-0.0 -0.369 83.2 13.9 -58.5 127.1 8.6 23.1 -3.1 81 82 A G T 34 S+ 0 0 77 2,-0.4 -1,-0.3 1,-0.1 -4,-0.1 0.347 122.7 67.0 86.3 -5.6 11.6 23.0 -5.5 82 83 A L T <4 S+ 0 0 139 -3,-2.5 -2,-0.2 1,-0.3 -3,-0.1 0.662 105.3 31.8-110.5 -35.1 10.6 26.4 -7.1 83 84 A V S >< S- 0 0 69 -4,-2.0 3,-0.9 0, 0.0 -2,-0.4 -0.991 86.0-124.5-126.3 121.7 11.2 28.7 -4.1 84 85 A P T 3 S+ 0 0 122 0, 0.0 -4,-0.0 0, 0.0 -5,-0.0 -0.347 93.9 40.7 -59.2 142.8 14.0 27.9 -1.5 85 86 A G T 3 S+ 0 0 41 2,-0.0 -60,-0.1 -60,-0.0 -62,-0.1 0.537 71.0 124.0 98.1 5.6 12.8 27.7 2.1 86 87 A A < + 0 0 3 -3,-0.9 -10,-2.1 -7,-0.2 2,-0.3 0.305 66.8 62.4 -79.9 10.9 9.5 25.9 1.3 87 88 A A E -D 75 0A 41 -12,-0.2 2,-0.4 -60,-0.1 -12,-0.2 -0.990 58.3-173.8-140.7 137.4 10.5 23.1 3.7 88 89 A K E -D 74 0A 65 -14,-2.0 -14,-2.9 -2,-0.3 2,-0.3 -0.974 17.4-146.1-136.2 120.7 11.2 23.1 7.5 89 90 A R E -D 73 0A 134 -2,-0.4 2,-0.3 -16,-0.3 -16,-0.3 -0.632 14.8-175.5 -89.8 144.0 12.5 20.0 9.3 90 91 A I E -D 72 0A 9 -18,-3.4 -18,-2.6 -2,-0.3 2,-0.6 -0.985 27.2-123.3-133.5 150.8 11.7 18.9 12.8 91 92 A K E +D 71 0A 121 -2,-0.3 -20,-0.2 -20,-0.2 -79,-0.1 -0.824 28.2 177.6 -92.3 120.5 13.0 16.0 14.9 92 93 A I + 0 0 0 -22,-2.3 -21,-0.2 -2,-0.6 -1,-0.2 0.895 54.6 78.3 -89.9 -46.7 10.0 13.9 16.0 93 94 A I 0 0 67 -23,-1.9 -57,-0.1 1,-0.2 -23,-0.1 -0.335 360.0 360.0 -72.0 144.8 11.7 11.1 18.0 94 95 A K 0 0 110 -2,-0.0 -1,-0.2 0, 0.0 -2,-0.1 0.057 360.0 360.0 -32.3 360.0 12.9 11.8 21.6