==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT PROTEIN 20-MAY-94 1PLA . COMPND 2 MOLECULE: PLASTOCYANIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PETROSELINUM CRISPUM; . AUTHOR S.BAGBY,P.C.DRISCOLL,T.S.HARVEY,H.A.O.HILL . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5528.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 64.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 10.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 19 19.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 41 0, 0.0 27,-1.8 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 151.9 -3.3 6.8 -31.1 2 2 A E E -a 28 0A 124 25,-0.2 2,-0.5 27,-0.0 27,-0.2 -0.976 360.0-171.7-131.2 122.1 -5.8 6.6 -28.3 3 3 A V E -a 29 0A 0 25,-2.4 27,-3.2 -2,-0.4 2,-0.7 -0.946 10.1-153.5-115.2 126.6 -8.9 8.7 -27.8 4 4 A K E -aB 30 15A 105 11,-3.3 11,-1.4 -2,-0.5 2,-0.7 -0.857 9.8-144.6-101.7 116.2 -10.9 8.6 -24.6 5 5 A L E S+aB 31 14A 0 25,-3.0 27,-2.3 -2,-0.7 28,-1.1 -0.683 78.0 22.2 -79.6 114.6 -14.6 9.5 -25.0 6 6 A G S S- 0 0 2 7,-1.7 6,-0.2 -2,-0.7 28,-0.1 0.618 87.9-113.9 96.8 108.0 -15.6 11.3 -21.9 7 7 A S - 0 0 19 4,-1.7 4,-0.1 1,-0.1 -2,-0.0 -0.192 24.2-113.6 -67.5 164.1 -13.0 13.0 -19.7 8 8 A D S S- 0 0 117 1,-0.1 -1,-0.1 2,-0.1 4,-0.1 0.627 105.0 -18.8 -74.3 -10.8 -12.3 11.7 -16.2 9 9 A D S S+ 0 0 149 2,-0.1 -1,-0.1 0, 0.0 3,-0.1 0.318 119.9 87.1-170.3 -9.7 -13.8 15.0 -14.9 10 10 A G S S- 0 0 59 1,-0.3 2,-0.4 3,-0.1 -2,-0.1 0.763 92.6-123.5 -74.5 -23.4 -13.7 17.5 -17.7 11 11 A G - 0 0 40 -4,-0.1 -4,-1.7 2,-0.1 2,-0.8 -0.934 59.8 -13.1 120.0-142.1 -17.2 16.3 -18.8 12 12 A L S S+ 0 0 57 -2,-0.4 2,-0.3 -6,-0.2 -7,-0.1 -0.844 84.8 127.3-103.3 102.5 -18.1 15.0 -22.3 13 13 A V - 0 0 57 -2,-0.8 -7,-1.7 -9,-0.1 2,-0.8 -0.990 65.5 -98.8-150.5 158.1 -15.4 15.7 -24.8 14 14 A F E -B 5 0A 4 77,-0.3 -9,-0.2 -2,-0.3 77,-0.1 -0.705 47.4-132.4 -78.8 112.0 -13.2 14.1 -27.4 15 15 A S E S+B 4 0A 28 -11,-1.4 -11,-3.3 -2,-0.8 2,-0.2 -0.895 99.6 20.7-114.4 107.6 -9.9 13.6 -25.6 16 16 A P S S- 0 0 65 0, 0.0 3,-0.1 0, 0.0 -3,-0.0 0.590 90.5-162.5 -67.6 176.6 -7.8 14.5 -27.4 17 17 A S S S+ 0 0 67 1,-0.4 76,-1.6 -2,-0.2 2,-0.4 0.907 70.3 9.7 -92.5 -58.8 -10.2 16.7 -29.5 18 18 A S E S+d 93 0B 71 74,-0.2 -1,-0.4 -4,-0.1 2,-0.3 -0.972 72.2 161.8-124.1 138.6 -8.2 17.3 -32.7 19 19 A F E -d 94 0B 28 74,-1.8 76,-0.9 -2,-0.4 2,-0.2 -0.950 30.4-131.6-159.7 136.1 -4.9 15.5 -33.7 20 20 A T E +d 95 0B 101 -2,-0.3 2,-0.3 74,-0.2 76,-0.2 -0.572 31.1 175.9 -86.0 150.7 -2.8 14.9 -36.7 21 21 A V E -d 96 0B 16 74,-1.6 76,-1.9 -2,-0.2 2,-0.3 -0.867 31.2 -93.0-144.2 177.8 -1.6 11.4 -37.5 22 22 A A > - 0 0 48 -2,-0.3 2,-1.7 74,-0.2 3,-1.5 -0.742 48.7 -96.3 -98.0 145.8 0.3 9.4 -40.1 23 23 A A T 3 S+ 0 0 43 -2,-0.3 50,-0.2 1,-0.3 -1,-0.1 -0.356 119.4 36.0 -60.4 88.9 -1.4 7.5 -42.9 24 24 A G T 3 S+ 0 0 51 -2,-1.7 2,-0.4 48,-0.8 -1,-0.3 0.436 82.4 136.8 139.2 19.7 -1.5 4.1 -41.2 25 25 A E < - 0 0 83 -3,-1.5 2,-0.6 47,-0.5 47,-0.4 -0.764 52.8-125.7 -96.3 137.7 -2.0 5.0 -37.5 26 26 A K - 0 0 123 -2,-0.4 2,-0.7 45,-0.1 45,-0.2 -0.709 23.2-166.0 -84.9 120.1 -4.5 3.0 -35.4 27 27 A I E - C 0 70A 2 43,-2.7 43,-1.1 -2,-0.6 2,-0.6 -0.901 4.0-170.6-109.3 110.9 -7.1 5.3 -33.8 28 28 A T E -aC 2 69A 19 -27,-1.8 -25,-2.4 -2,-0.7 2,-1.0 -0.874 13.1-152.3-106.2 116.9 -9.0 3.6 -31.0 29 29 A F E -aC 3 68A 3 39,-2.4 39,-1.1 -2,-0.6 2,-0.4 -0.735 22.2-170.6 -85.9 103.6 -12.0 5.4 -29.5 30 30 A K E -aC 4 67A 108 -27,-3.2 -25,-3.0 -2,-1.0 2,-0.4 -0.798 22.1-125.8-101.7 135.2 -12.2 4.1 -26.0 31 31 A N E +a 5 0A 4 35,-1.9 34,-0.2 -2,-0.4 -25,-0.1 -0.622 31.0 172.0 -76.7 126.2 -15.2 4.8 -23.7 32 32 A N S S- 0 0 44 -27,-2.3 -26,-0.2 -2,-0.4 -1,-0.2 0.775 71.3 -43.2-106.8 -32.6 -14.0 6.3 -20.4 33 33 A A S S+ 0 0 65 -28,-1.1 -27,-0.2 -22,-0.0 -26,-0.1 0.328 114.3 84.8 178.1 11.9 -17.2 7.3 -18.5 34 34 A G - 0 0 10 -29,-0.8 -28,-0.1 -28,-0.1 -27,-0.0 -0.282 69.6-170.6-124.9 49.7 -19.6 9.0 -20.9 35 35 A F + 0 0 79 27,-0.1 27,-0.2 1,-0.1 2,-0.1 -0.552 56.7 51.9 -91.1 161.3 -21.5 6.1 -22.6 36 36 A P S S+ 0 0 72 0, 0.0 2,-0.2 0, 0.0 26,-0.2 0.463 78.1 178.0 -78.2 142.4 -23.4 5.5 -24.7 37 37 A H E -G 61 0C 1 24,-1.5 24,-0.8 -2,-0.1 2,-0.4 -0.686 13.3-161.1-107.3 162.4 -21.2 7.3 -27.2 38 38 A N E - 0 0 3 -2,-0.2 2,-0.5 22,-0.1 47,-0.2 -0.997 3.1-163.4-144.6 137.8 -21.6 7.7 -31.0 39 39 A I E +G 57 0C 2 18,-0.6 18,-2.5 -2,-0.4 2,-0.4 -0.960 15.3 166.9-127.3 117.5 -19.1 8.6 -33.7 40 40 A V E -E 81 0B 31 41,-2.0 41,-1.7 -2,-0.5 2,-0.7 -0.974 31.2-128.4-128.6 142.8 -20.2 9.8 -37.2 41 41 A F E -E 80 0B 7 11,-0.6 2,-0.8 -2,-0.4 39,-0.3 -0.792 26.2-120.9 -95.1 117.7 -18.1 11.4 -39.9 42 42 A D > - 0 0 32 37,-2.3 3,-2.5 -2,-0.7 4,-0.5 -0.337 20.4-159.5 -55.4 99.3 -19.6 14.6 -41.3 43 43 A E T 3 S+ 0 0 151 -2,-0.8 -1,-0.2 1,-0.3 37,-0.1 0.455 86.9 68.8 -64.0 5.3 -19.9 13.5 -44.9 44 44 A D T 3 S+ 0 0 131 35,-0.2 -1,-0.3 1,-0.1 -2,-0.1 0.533 109.6 28.8 -99.8 -8.7 -20.0 17.3 -45.6 45 45 A E S < S+ 0 0 99 -3,-2.5 34,-0.2 34,-0.2 -2,-0.2 0.164 94.6 109.2-134.6 16.3 -16.3 17.8 -44.7 46 46 A V S S- 0 0 25 -4,-0.5 32,-0.1 32,-0.2 6,-0.1 -0.719 82.5 -84.8 -95.5 147.0 -14.8 14.5 -45.5 47 47 A P > - 0 0 29 0, 0.0 2,-2.8 0, 0.0 3,-0.6 -0.098 45.4-107.4 -47.8 142.7 -12.4 14.1 -48.5 48 48 A A T 3 S+ 0 0 116 1,-0.2 3,-0.1 -3,-0.1 -5,-0.0 -0.394 112.2 33.7 -74.2 70.6 -14.2 13.5 -51.7 49 49 A G T 3 S+ 0 0 66 -2,-2.8 2,-1.0 1,-0.2 -1,-0.2 0.107 90.7 89.6 174.5 -37.7 -13.2 9.8 -51.9 50 50 A V S < S- 0 0 33 -3,-0.6 -1,-0.2 24,-0.1 5,-0.1 -0.712 77.2-129.0 -86.2 104.9 -13.0 8.4 -48.4 51 51 A N - 0 0 85 -2,-1.0 4,-0.3 1,-0.1 5,-0.1 -0.101 7.8-149.1 -48.3 147.7 -16.4 7.0 -47.6 52 52 A A S > S+ 0 0 15 2,-0.1 4,-1.2 1,-0.1 -11,-0.6 0.499 90.9 60.9 -99.5 -5.8 -17.8 8.3 -44.3 53 53 A E T 4 S+ 0 0 122 2,-0.2 -1,-0.1 1,-0.1 -2,-0.1 0.790 95.8 58.2 -90.1 -30.5 -19.8 5.1 -43.5 54 54 A K T 4 S+ 0 0 144 1,-0.2 -1,-0.1 3,-0.1 -2,-0.1 0.830 118.1 32.5 -69.2 -29.9 -16.9 2.7 -43.5 55 55 A I T 4 S+ 0 0 18 -4,-0.3 -2,-0.2 15,-0.1 -1,-0.2 0.827 105.7 82.4 -94.2 -37.5 -15.2 4.7 -40.7 56 56 A S < - 0 0 8 -4,-1.2 -16,-0.2 -15,-0.1 3,-0.1 -0.201 62.7-155.4 -64.0 159.6 -18.3 5.9 -38.9 57 57 A Q E +G 39 0C 8 -18,-2.5 -18,-0.6 1,-0.1 -1,-0.1 -0.585 18.9 171.5-139.7 75.7 -20.1 3.6 -36.4 58 58 A P E + 0 0 66 0, 0.0 2,-1.2 0, 0.0 -1,-0.1 0.737 51.5 109.1 -57.6 -21.8 -23.7 4.5 -36.0 59 59 A E E S- 0 0 142 -3,-0.1 -20,-0.1 -20,-0.1 0, 0.0 -0.388 76.9-131.3 -59.2 95.7 -24.1 1.4 -34.0 60 60 A Y E - 0 0 172 -2,-1.2 2,-0.3 1,-0.1 -22,-0.1 0.081 20.2-150.8 -42.7 163.1 -24.6 3.0 -30.6 61 61 A L E +G 37 0C 30 -24,-0.8 -24,-1.5 1,-0.1 -1,-0.1 -0.851 29.4 168.3-150.1 111.6 -22.5 1.6 -27.8 62 62 A N + 0 0 125 -2,-0.3 2,-0.3 -26,-0.2 -27,-0.1 0.094 42.8 125.5-106.3 21.7 -23.3 1.5 -24.1 63 63 A G - 0 0 23 1,-0.1 2,-0.7 2,-0.0 3,-0.5 -0.631 63.6-123.2 -83.7 137.7 -20.4 -0.9 -23.2 64 64 A A S S+ 0 0 82 -2,-0.3 3,-0.1 1,-0.2 -32,-0.1 -0.689 96.3 1.7 -82.3 114.5 -18.0 0.2 -20.5 65 65 A G S S+ 0 0 32 -2,-0.7 -1,-0.2 1,-0.3 -33,-0.0 0.257 95.9 142.2 95.1 -13.7 -14.5 0.2 -21.9 66 66 A E - 0 0 117 -3,-0.5 -35,-1.9 -36,-0.1 -1,-0.3 -0.245 28.1-175.9 -59.3 150.3 -15.7 -0.9 -25.3 67 67 A T E -C 30 0A 54 -37,-0.2 2,-0.4 -3,-0.1 -37,-0.2 -0.935 22.4-140.4-145.6 168.7 -13.8 0.7 -28.2 68 68 A Y E -C 29 0A 102 -39,-1.1 -39,-2.4 -2,-0.3 2,-0.2 -0.995 18.3-139.6-135.3 129.9 -13.8 1.0 -32.0 69 69 A E E -C 28 0A 108 -2,-0.4 2,-0.3 -41,-0.2 -41,-0.2 -0.565 18.9-179.8 -90.0 152.9 -10.6 1.1 -34.2 70 70 A V E -C 27 0A 8 -43,-1.1 -43,-2.7 -2,-0.2 2,-0.5 -0.960 9.9-172.7-151.8 130.8 -10.1 3.3 -37.2 71 71 A T - 0 0 68 -2,-0.3 -45,-0.1 -45,-0.2 2,-0.1 -0.815 9.4-171.5-129.9 93.9 -7.2 3.6 -39.5 72 72 A L - 0 0 9 -2,-0.5 -48,-0.8 -47,-0.4 -47,-0.5 -0.439 6.9-176.4 -79.4 158.0 -7.3 6.3 -42.1 73 73 A T + 0 0 102 -50,-0.2 2,-0.3 -49,-0.1 -50,-0.1 -0.127 48.2 93.4-149.9 46.1 -4.7 6.5 -44.8 74 74 A E S S- 0 0 81 -52,-0.0 22,-0.3 2,-0.0 -1,-0.1 -0.794 75.4-120.3-144.9 100.0 -5.3 9.6 -46.9 75 75 A K S S+ 0 0 146 -2,-0.3 2,-0.3 20,-0.1 22,-0.2 -0.084 77.9 75.8 -39.5 112.5 -3.4 12.8 -46.1 76 76 A G E S- F 0 96B 21 20,-0.9 20,-1.0 18,-0.1 2,-0.4 -0.920 81.8 -69.1 174.8-148.9 -6.2 15.3 -45.4 77 77 A T E - F 0 95B 55 -2,-0.3 2,-0.5 18,-0.2 18,-0.2 -0.991 29.3-166.9-142.0 132.3 -8.8 16.2 -42.8 78 78 A Y E - F 0 94B 0 16,-1.6 16,-1.5 -2,-0.4 2,-0.7 -0.971 10.9-151.3-120.8 126.0 -11.9 14.3 -41.5 79 79 A K E + F 0 93B 45 -2,-0.5 -37,-2.3 -37,-0.3 2,-0.3 -0.844 27.3 160.0-100.4 114.1 -14.5 16.0 -39.3 80 80 A F E +EF 41 92B 5 12,-2.4 12,-3.3 -2,-0.7 2,-0.3 -0.791 4.7 158.8-125.0 169.7 -16.4 13.7 -36.9 81 81 A Y E -EF 40 91B 77 -41,-1.7 -41,-2.0 10,-0.3 2,-0.7 -0.975 43.5 -83.1-171.3-179.8 -18.4 14.2 -33.8 82 82 A C - 0 0 0 8,-2.2 8,-0.2 -2,-0.3 7,-0.2 -0.904 26.2-166.3-106.4 115.3 -21.0 12.8 -31.4 83 83 A E S S+ 0 0 116 -2,-0.7 3,-0.5 2,-0.2 4,-0.2 0.899 88.2 46.3 -66.9 -40.4 -24.5 13.5 -32.5 84 84 A P S > S+ 0 0 68 0, 0.0 3,-0.7 0, 0.0 -1,-0.2 0.942 120.4 36.9 -69.0 -47.7 -26.1 12.5 -29.2 85 85 A H G >>>S+ 0 0 37 1,-0.2 3,-2.3 -47,-0.2 4,-1.2 0.300 84.6 108.4 -87.9 12.2 -23.7 14.5 -27.0 86 86 A A G 345 + 0 0 51 -3,-0.5 -1,-0.2 1,-0.3 -3,-0.1 0.788 64.6 72.8 -58.7 -24.4 -23.5 17.3 -29.5 87 87 A G G <45S+ 0 0 86 -3,-0.7 -1,-0.3 1,-0.2 -2,-0.1 0.765 102.0 42.5 -62.2 -22.2 -25.5 19.3 -27.0 88 88 A A T <45S- 0 0 69 -3,-2.3 -1,-0.2 2,-0.1 -2,-0.2 0.790 124.7-100.4 -92.9 -31.8 -22.3 19.5 -24.9 89 89 A G T <5 + 0 0 46 -4,-1.2 2,-1.0 -7,-0.2 -3,-0.2 0.647 55.5 168.6 117.2 30.2 -19.9 20.2 -27.8 90 90 A M < + 0 0 1 -5,-1.0 -8,-2.2 -8,-0.2 2,-0.3 -0.636 16.5 154.9 -77.9 105.5 -18.4 16.7 -28.4 91 91 A K E - F 0 81B 119 -2,-1.0 -77,-0.3 -10,-0.2 2,-0.3 -0.840 24.4-158.3-127.6 166.9 -16.5 17.0 -31.7 92 92 A G E + F 0 80B 3 -12,-3.3 -12,-2.4 -2,-0.3 2,-0.3 -0.998 9.9 175.2-147.8 148.4 -13.6 15.3 -33.4 93 93 A E E -dF 18 79B 58 -76,-1.6 -74,-1.8 -2,-0.3 2,-0.4 -0.987 7.3-168.5-153.6 141.6 -11.0 15.9 -36.1 94 94 A V E -dF 19 78B 1 -16,-1.5 -16,-1.6 -2,-0.3 2,-0.9 -0.978 8.3-158.4-136.9 125.3 -8.0 14.1 -37.5 95 95 A T E -dF 20 77B 37 -76,-0.9 -74,-1.6 -2,-0.4 -18,-0.2 -0.813 16.2-163.3-103.3 98.7 -5.4 15.6 -39.8 96 96 A V E dF 21 76B 0 -20,-1.0 -20,-0.9 -2,-0.9 -74,-0.2 -0.501 360.0 360.0 -80.0 148.3 -3.6 12.7 -41.6 97 97 A N 0 0 136 -76,-1.9 -2,-0.0 -22,-0.2 -77,-0.0 -0.687 360.0 360.0-158.9 360.0 -0.3 13.4 -43.3