==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=15-JUL-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 06-MAY-93 2PLT . COMPND 2 MOLECULE: PLASTOCYANIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; . AUTHOR M.R.REDINBO,S.MERCHANT,T.O.YEATES . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4801.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 15.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A D 0 0 119 0, 0.0 2,-0.3 0, 0.0 27,-0.2 0.000 360.0 360.0 360.0 159.2 39.5 71.7 31.7 2 1 A A E -a 28 0A 20 25,-1.9 27,-3.1 2,-0.0 2,-0.4 -0.952 360.0-128.4-145.0 162.4 42.5 70.1 33.4 3 2 A T E -a 29 0A 77 -2,-0.3 2,-0.5 25,-0.2 27,-0.2 -0.924 12.2-170.7-119.5 136.6 46.2 69.6 33.0 4 3 A V E -a 30 0A 0 25,-2.4 27,-2.8 -2,-0.4 2,-0.4 -0.997 19.7-140.9-122.6 124.3 48.2 66.4 33.1 5 4 A K E -aB 31 16A 69 11,-3.0 11,-2.2 -2,-0.5 2,-1.0 -0.714 8.9-137.5 -85.0 136.9 52.0 66.7 33.2 6 5 A L E S+aB 32 15A 0 25,-2.9 28,-2.3 -2,-0.4 27,-2.1 -0.832 83.0 4.0 -95.9 103.8 54.0 64.2 31.1 7 6 A G S S- 0 0 0 7,-2.8 6,-0.2 -2,-1.0 9,-0.1 0.251 91.8 -96.6 93.8 136.9 56.8 63.4 33.5 8 7 A A > - 0 0 10 4,-2.8 3,-2.3 1,-0.1 -2,-0.0 -0.500 36.2-108.0 -79.7 161.5 57.2 64.8 37.0 9 8 A D T 3 S+ 0 0 118 1,-0.3 -1,-0.1 2,-0.1 0, 0.0 0.822 121.1 60.4 -59.6 -29.5 59.4 67.8 37.5 10 9 A S T 3 S- 0 0 105 1,-0.1 -1,-0.3 24,-0.1 -3,-0.0 0.587 124.6-102.7 -71.2 -14.8 61.9 65.5 39.2 11 10 A G < + 0 0 36 -3,-2.3 -2,-0.1 1,-0.3 -1,-0.1 0.362 69.8 151.9 107.0 -7.4 62.2 63.4 36.0 12 11 A A - 0 0 34 1,-0.1 -4,-2.8 -5,-0.1 2,-1.9 -0.383 52.5-120.9 -61.6 139.6 60.1 60.6 37.2 13 12 A L S S+ 0 0 56 -6,-0.2 2,-0.3 76,-0.1 -1,-0.1 -0.532 70.7 111.4 -84.4 76.7 58.3 58.8 34.2 14 13 A E S S- 0 0 97 -2,-1.9 -7,-2.8 77,-0.1 2,-0.5 -0.949 70.6-111.9-148.5 156.4 54.8 59.3 35.3 15 14 A F E -B 6 0A 3 77,-0.4 -9,-0.2 -2,-0.3 77,-0.1 -0.827 45.2-117.9 -86.1 135.7 51.6 61.2 34.4 16 15 A V E S+B 5 0A 53 -11,-2.2 -11,-3.0 -2,-0.5 2,-0.1 -0.958 103.7 23.9-125.0 111.0 50.9 63.8 37.0 17 16 A P S S- 0 0 54 0, 0.0 -1,-0.2 0, 0.0 77,-0.2 0.549 82.5-158.2 -76.1 161.2 48.3 63.3 38.3 18 17 A K S S+ 0 0 105 1,-0.2 76,-2.3 -2,-0.1 2,-0.5 0.853 85.1 33.1 -72.2 -40.1 48.1 59.6 37.7 19 18 A T E S-d 94 0B 69 74,-0.2 2,-0.4 -4,-0.1 -1,-0.2 -0.984 77.1-174.0-121.6 117.8 44.3 59.4 38.1 20 19 A L E -d 95 0B 19 74,-2.5 76,-3.1 -2,-0.5 2,-0.5 -0.902 10.8-155.1-113.3 140.0 42.4 62.5 37.0 21 20 A T E +d 96 0B 74 -2,-0.4 2,-0.3 74,-0.2 76,-0.2 -0.959 22.8 163.1-114.7 130.9 38.7 63.1 37.5 22 21 A I E -d 97 0B 3 74,-2.9 76,-2.8 -2,-0.5 2,-0.3 -0.926 37.1-107.0-137.3 166.9 36.8 65.5 35.1 23 22 A K > - 0 0 41 -2,-0.3 3,-2.2 74,-0.2 50,-0.2 -0.661 52.6 -83.9 -92.8 149.1 33.3 66.3 34.1 24 23 A S T 3 S+ 0 0 65 74,-2.7 50,-0.3 -2,-0.3 -1,-0.1 -0.260 116.8 27.8 -48.9 131.1 32.0 65.2 30.7 25 24 A G T 3 S+ 0 0 27 48,-3.3 -1,-0.3 1,-0.4 49,-0.2 0.336 87.2 129.6 97.3 -11.0 32.9 67.8 28.1 26 25 A E < - 0 0 55 -3,-2.2 47,-1.9 47,-0.3 2,-0.5 -0.411 56.6-126.6 -75.6 153.5 36.1 69.1 29.8 27 26 A T E - C 0 72A 29 45,-0.2 -25,-1.9 -3,-0.1 2,-0.5 -0.913 15.6-147.6-100.3 136.1 39.3 69.3 27.7 28 27 A V E -aC 2 71A 0 43,-3.0 43,-2.1 -2,-0.5 2,-0.6 -0.897 7.8-154.4-105.5 126.5 42.4 67.6 29.2 29 28 A N E -aC 3 70A 36 -27,-3.1 -25,-2.4 -2,-0.5 2,-0.6 -0.936 1.6-158.6-106.7 109.2 45.6 69.2 28.3 30 29 A F E -aC 4 69A 0 39,-3.0 39,-2.4 -2,-0.6 2,-0.5 -0.846 14.5-162.7 -87.7 117.9 48.6 66.9 28.3 31 30 A V E -aC 5 68A 36 -27,-2.8 -25,-2.9 -2,-0.6 2,-0.2 -0.910 19.5-124.4-113.3 122.3 51.7 69.1 28.8 32 31 A N E +a 6 0A 2 35,-3.2 34,-3.0 -2,-0.5 -25,-0.1 -0.437 45.6 153.8 -64.5 126.9 55.2 67.8 28.0 33 32 A N - 0 0 47 -27,-2.1 2,-0.3 1,-0.3 -26,-0.2 0.756 51.0 -16.1-125.0 -56.8 57.3 68.2 31.2 34 33 A A S S+ 0 0 17 -28,-2.3 -1,-0.3 -22,-0.1 -24,-0.1 -0.995 109.8 31.0-155.4 155.3 60.3 65.9 31.7 35 34 A G S S- 0 0 34 -2,-0.3 -28,-0.1 1,-0.2 -1,-0.1 0.674 91.0-164.1 72.7 16.9 61.7 62.7 30.5 36 35 A F + 0 0 71 -30,-0.1 -1,-0.2 27,-0.1 2,-0.1 -0.254 60.6 85.6 -68.7 166.8 60.3 63.1 26.9 37 36 A P + 0 0 45 0, 0.0 2,-0.3 0, 0.0 26,-0.2 0.329 65.0 154.1 -68.8 154.9 59.6 62.0 24.3 38 37 A H E -G 62 0C 0 24,-1.3 24,-2.9 -2,-0.1 2,-0.3 -0.900 22.5-166.6-140.0 163.8 56.3 60.8 25.4 39 38 A N E - 0 0 0 -2,-0.3 2,-0.4 22,-0.2 20,-0.2 -0.867 21.2-123.4-143.1 176.3 53.0 60.1 23.7 40 39 A I E +G 58 0C 0 18,-2.1 18,-3.0 -2,-0.3 2,-0.5 -0.903 30.1 173.6-130.4 102.9 49.4 59.5 24.8 41 40 A V E -E 82 0B 6 41,-3.0 41,-2.4 -2,-0.4 2,-0.2 -0.930 21.8-142.6-116.2 119.8 47.8 56.2 23.8 42 41 A F E -E 81 0B 0 -2,-0.5 2,-0.6 11,-0.4 39,-0.3 -0.582 22.8-117.7 -78.7 144.9 44.4 55.2 25.1 43 42 A D > - 0 0 49 37,-2.7 3,-2.1 3,-0.3 37,-0.4 -0.764 11.8-151.2 -88.1 120.6 43.8 51.6 25.8 44 43 A E G > S+ 0 0 108 -2,-0.6 3,-0.6 1,-0.3 -1,-0.1 0.767 98.6 55.2 -58.1 -34.5 41.1 50.0 23.6 45 44 A D G 3 S+ 0 0 149 1,-0.2 -1,-0.3 -3,-0.0 -2,-0.0 0.535 110.7 45.0 -79.3 -3.3 40.4 47.6 26.4 46 45 A A G < S+ 0 0 39 -3,-2.1 34,-3.1 34,-0.2 -3,-0.3 -0.328 89.6 91.4-139.1 54.8 39.8 50.3 29.0 47 46 A I S < S- 0 0 30 -3,-0.6 32,-0.2 32,-0.2 3,-0.1 -0.943 79.7 -84.3-139.2 158.5 37.6 53.0 27.5 48 47 A P > - 0 0 19 0, 0.0 3,-1.9 0, 0.0 29,-0.1 -0.236 57.1 -83.6 -62.4 156.8 33.8 53.6 27.5 49 48 A S T 3 S+ 0 0 124 1,-0.2 3,-0.1 3,-0.0 26,-0.0 -0.263 114.9 21.7 -55.7 139.0 31.6 51.9 24.9 50 49 A G T 3 S+ 0 0 89 1,-0.3 2,-0.3 -3,-0.1 -1,-0.2 0.265 92.3 120.5 87.2 -13.2 31.4 53.7 21.6 51 50 A V < - 0 0 35 -3,-1.9 2,-0.7 -7,-0.1 -1,-0.3 -0.663 58.4-137.2 -88.0 141.9 34.7 55.6 22.1 52 51 A N > - 0 0 96 -2,-0.3 4,-1.1 1,-0.2 5,-0.2 -0.863 6.8-158.1-102.6 114.6 37.4 55.1 19.4 53 52 A A H >> S+ 0 0 5 -2,-0.7 4,-1.2 1,-0.2 3,-0.6 0.905 91.2 50.6 -58.7 -44.0 40.8 54.8 21.1 54 53 A D H 34 S+ 0 0 111 1,-0.2 3,-0.3 2,-0.2 -1,-0.2 0.871 104.6 57.4 -62.2 -40.0 42.7 55.8 17.9 55 54 A A H 34 S+ 0 0 78 1,-0.2 -1,-0.2 -3,-0.2 -2,-0.2 0.784 114.6 36.4 -63.6 -29.5 40.7 58.9 17.4 56 55 A I H << S+ 0 0 24 -4,-1.1 -1,-0.2 -3,-0.6 -2,-0.2 0.561 99.0 96.5-102.6 -6.6 41.6 60.3 20.8 57 56 A S < - 0 0 12 -4,-1.2 2,-0.6 -3,-0.3 -16,-0.2 -0.415 63.7-143.4 -83.7 156.4 45.2 59.1 21.1 58 57 A R E +G 40 0C 68 -18,-3.0 -18,-2.1 1,-0.1 4,-0.1 -0.956 26.2 170.4-114.6 98.8 48.3 61.2 20.2 59 59 A D E + 0 0 69 -2,-0.6 2,-0.3 -20,-0.2 -1,-0.1 0.833 52.4 84.2 -80.1 -35.2 50.6 58.6 18.7 60 61 A D E S- 0 0 124 -3,-0.1 -20,-0.2 1,-0.1 -22,-0.1 -0.537 91.2-102.5 -72.3 134.2 53.2 60.9 17.4 61 62 A Y E - 0 0 103 -2,-0.3 2,-0.5 -22,-0.1 -22,-0.2 -0.196 17.5-134.9 -59.7 145.2 55.8 61.9 20.1 62 63 A L E +G 38 0C 0 -24,-2.9 -24,-1.3 1,-0.1 -1,-0.1 -0.876 29.7 174.2 -96.1 125.2 55.9 65.2 22.1 63 64 A N + 0 0 99 -2,-0.5 -1,-0.1 -26,-0.2 -27,-0.1 0.653 46.1 63.0-110.5 -24.3 59.5 66.2 22.0 64 65 A A S > S- 0 0 45 1,-0.0 3,-2.2 -30,-0.0 -32,-0.2 -0.853 85.9 -98.0-112.6 149.8 59.8 69.7 23.6 65 66 A P T 3 S+ 0 0 97 0, 0.0 -32,-0.2 0, 0.0 3,-0.1 -0.356 112.6 18.3 -59.2 137.2 59.1 71.1 27.1 66 67 A G T 3 S+ 0 0 45 -34,-3.0 2,-0.1 1,-0.3 -33,-0.1 0.296 84.7 143.9 87.1 -14.3 55.7 72.7 27.1 67 68 A E < - 0 0 68 -3,-2.2 -35,-3.2 -36,-0.1 2,-0.4 -0.423 37.2-155.1 -57.9 131.5 54.5 70.9 23.9 68 69 A T E -C 31 0A 67 -37,-0.2 2,-0.5 -2,-0.1 -37,-0.2 -0.915 24.6-167.1-123.6 144.0 50.8 70.2 24.5 69 70 A Y E -C 30 0A 36 -39,-2.4 -39,-3.0 -2,-0.4 2,-0.4 -0.995 17.7-165.5-122.7 123.8 48.1 67.7 23.3 70 71 A S E +C 29 0A 59 -2,-0.5 2,-0.3 -41,-0.2 -41,-0.2 -0.932 10.3 174.0-116.6 138.1 44.5 68.6 24.1 71 72 A V E -C 28 0A 19 -43,-2.1 -43,-3.0 -2,-0.4 2,-0.5 -0.999 22.3-141.4-145.4 134.0 41.5 66.3 23.9 72 73 A K E -C 27 0A 121 -2,-0.3 2,-0.4 -45,-0.3 -45,-0.2 -0.858 18.1-162.3 -95.3 131.5 37.9 66.8 24.9 73 74 A L + 0 0 3 -47,-1.9 -48,-3.3 -2,-0.5 -47,-0.3 -0.929 20.3 162.2-117.4 138.5 36.2 63.7 26.4 74 75 A T + 0 0 78 -2,-0.4 2,-0.3 -50,-0.3 -1,-0.1 0.708 45.2 90.5-123.6 -36.7 32.5 63.4 26.6 75 76 A A S S- 0 0 33 1,-0.1 22,-0.1 -51,-0.1 -50,-0.1 -0.467 77.0-120.4 -71.4 128.5 31.4 59.8 27.3 76 77 A A + 0 0 63 -2,-0.3 2,-0.3 20,-0.1 22,-0.2 -0.345 69.1 62.8 -68.0 145.2 31.1 59.0 31.0 77 78 A G E S- F 0 97B 28 20,-2.3 20,-3.1 -29,-0.1 2,-0.4 -0.900 86.2 -45.0 139.1-162.1 33.3 56.2 32.4 78 79 A E E - F 0 96B 113 -2,-0.3 2,-0.5 18,-0.2 18,-0.2 -0.860 37.9-161.1-110.9 146.3 37.0 55.4 32.8 79 80 A Y E - F 0 95B 3 16,-3.0 16,-2.2 -2,-0.4 2,-0.3 -0.964 5.5-161.7-128.2 109.2 39.8 55.9 30.2 80 81 A G E + F 0 94B 12 -34,-3.1 -37,-2.7 -2,-0.5 2,-0.3 -0.710 20.6 166.2 -88.0 140.9 43.0 54.0 30.7 81 82 A Y E -EF 42 93B 5 12,-2.3 12,-2.7 -2,-0.3 2,-0.3 -0.960 13.5-170.8-150.0 167.0 46.0 55.3 28.8 82 83 A Y E -EF 41 92B 36 -41,-2.4 -41,-3.0 -2,-0.3 2,-0.6 -0.937 29.9-110.2-154.4 169.6 49.8 55.0 28.6 83 84 A C >> - 0 0 0 8,-2.0 3,-0.7 -2,-0.3 4,-0.7 -0.961 27.9-146.5-106.7 120.1 52.9 56.4 27.1 84 85 A E G >4 S+ 0 0 90 -2,-0.6 3,-1.2 1,-0.2 4,-0.4 0.930 94.7 48.2 -58.3 -51.1 54.4 53.9 24.6 85 86 A P G 34 S+ 0 0 53 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.790 124.8 32.6 -63.7 -18.6 58.1 54.5 25.1 86 87 A H G X4>S+ 0 0 31 -3,-0.7 5,-2.4 5,-0.2 3,-0.6 0.187 79.5 110.0-121.5 17.5 57.6 54.3 29.0 87 88 A Q G X<5S+ 0 0 97 -3,-1.2 3,-1.8 -4,-0.7 -1,-0.1 0.917 82.4 53.1 -60.1 -40.7 54.9 51.8 29.4 88 89 A G G 3 5S+ 0 0 86 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.777 104.0 55.1 -64.4 -29.0 57.5 49.3 30.9 89 90 A A G < 5S- 0 0 69 -3,-0.6 -1,-0.3 2,-0.1 -2,-0.2 0.343 127.1-101.8 -84.1 3.2 58.6 51.9 33.4 90 91 A G T < 5 + 0 0 37 -3,-1.8 2,-1.8 1,-0.2 -3,-0.2 0.669 66.2 156.1 86.6 18.6 55.0 52.2 34.5 91 92 A M < + 0 0 0 -5,-2.4 -8,-2.0 -8,-0.2 2,-0.3 -0.575 29.5 127.9 -80.7 83.1 54.0 55.4 32.8 92 93 A V E + F 0 82B 52 -2,-1.8 -77,-0.4 -10,-0.2 2,-0.3 -0.916 30.5 175.3-135.0 154.6 50.2 54.7 32.7 93 94 A G E - F 0 81B 10 -12,-2.7 -12,-2.3 -2,-0.3 2,-0.3 -0.926 17.5-136.0-150.6-176.3 47.3 56.7 33.9 94 95 A K E -dF 19 80B 66 -76,-2.3 -74,-2.5 -2,-0.3 2,-0.4 -0.998 2.4-157.0-153.0 142.4 43.5 57.0 34.0 95 96 A I E -dF 20 79B 0 -16,-2.2 -16,-3.0 -2,-0.3 2,-0.6 -0.986 8.8-157.0-123.1 130.4 40.9 59.6 33.5 96 97 A I E -dF 21 78B 49 -76,-3.1 -74,-2.9 -2,-0.4 2,-0.5 -0.961 8.8-159.5-108.2 120.3 37.5 59.3 35.1 97 98 A V E dF 22 77B 5 -20,-3.1 -20,-2.3 -2,-0.6 -74,-0.2 -0.918 360.0 360.0-104.7 124.3 34.8 61.2 33.2 98 99 A Q 0 0 162 -76,-2.8 -74,-2.7 -2,-0.5 -2,-0.0 -0.658 360.0 360.0 -95.7 360.0 31.7 62.1 35.3