==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-FEB-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PHOTOSYNTHESIS 14-NOV-10 3PL9 . COMPND 2 MOLECULE: CHLOROPHYLL A-B BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SPINACIA OLERACEA; . AUTHOR X.W.PAN,M.LI,T.WAN,L.F.WANG,C.J.JIA,Z.Q.HOU,X.L.ZHAO,J.P.ZHA . 156 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 11849.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 114 73.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 2.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 89 57.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 88 A G 0 0 82 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-165.0 35.0 -21.9 23.0 2 89 A L >> + 0 0 117 2,-0.1 3,-2.3 3,-0.1 4,-1.6 0.781 360.0 44.5-105.4 -80.8 33.3 -21.4 19.6 3 90 A Q H 3> S+ 0 0 76 1,-0.3 4,-1.2 2,-0.2 5,-0.1 0.810 114.3 56.6 -35.3 -38.9 29.8 -19.9 19.8 4 91 A R H >> S+ 0 0 162 1,-0.2 4,-3.1 2,-0.2 3,-0.5 0.909 103.0 53.3 -62.5 -41.8 31.3 -17.6 22.4 5 92 A F H <> S+ 0 0 124 -3,-2.3 4,-3.4 1,-0.3 -2,-0.2 0.873 101.7 58.4 -60.3 -37.6 33.8 -16.5 19.8 6 93 A R H 3X S+ 0 0 85 -4,-1.6 4,-1.8 2,-0.2 -1,-0.3 0.841 111.4 43.4 -61.1 -31.1 31.0 -15.7 17.4 7 94 A E H S+ 0 0 43 -4,-2.1 4,-2.6 2,-0.2 6,-0.8 0.877 114.0 45.4 -64.4 -37.7 35.0 14.2 16.5 27 114 A E H X5S+ 0 0 23 -4,-1.5 4,-1.1 -5,-0.2 -2,-0.2 0.927 113.4 50.6 -70.6 -43.1 38.3 15.2 14.7 28 115 A G H <5S+ 0 0 43 -4,-2.8 -2,-0.2 -5,-0.2 -1,-0.2 0.782 123.3 29.0 -66.3 -26.0 36.3 16.4 11.7 29 116 A L H <5S+ 0 0 112 -4,-1.8 -2,-0.2 -5,-0.2 -3,-0.2 0.819 133.5 23.3-105.1 -37.6 34.0 18.6 13.8 30 117 A T H <5S- 0 0 48 -4,-2.6 -3,-0.2 -5,-0.3 -2,-0.1 0.489 90.5-127.6-108.0 -6.2 35.9 19.7 16.9 31 118 A G S < - 0 0 17 -2,-0.4 4,-2.0 -3,-0.1 3,-0.1 -0.381 19.2-113.2 -80.7 164.3 41.6 13.8 18.1 34 121 A W T 4 S+ 0 0 70 1,-0.2 4,-0.4 2,-0.2 -1,-0.1 0.825 115.0 53.0 -65.3 -31.9 40.2 10.5 19.5 35 122 A Q T 4 S+ 0 0 59 1,-0.2 4,-0.4 2,-0.1 3,-0.4 0.854 114.6 40.2 -71.4 -36.5 43.3 9.9 21.6 36 123 A D T > S+ 0 0 84 1,-0.2 4,-2.2 2,-0.1 5,-0.4 0.785 89.3 91.9 -82.9 -28.2 43.3 13.3 23.3 37 124 A A H X S+ 0 0 29 -4,-2.0 4,-1.3 1,-0.2 -1,-0.2 0.764 86.1 52.3 -33.9 -43.6 39.5 13.4 23.7 38 125 A G H > S+ 0 0 46 -4,-0.4 4,-1.8 -3,-0.4 3,-0.4 0.982 112.1 42.6 -62.2 -57.7 39.8 11.9 27.2 39 126 A K H > S+ 0 0 145 -4,-0.4 4,-3.0 -3,-0.4 5,-0.3 0.917 116.2 46.4 -57.1 -49.4 42.4 14.4 28.5 40 127 A V H X S+ 0 0 21 -4,-2.2 4,-1.6 1,-0.2 -1,-0.2 0.762 111.2 53.5 -69.2 -20.0 40.7 17.5 27.0 41 128 A E H < S+ 0 0 58 -4,-1.3 -1,-0.2 -5,-0.4 -2,-0.2 0.829 114.4 42.3 -78.6 -31.3 37.3 16.3 28.3 42 129 A L H < S+ 0 0 92 -4,-1.8 -2,-0.2 -3,-0.2 15,-0.2 0.891 120.5 40.2 -78.7 -44.9 38.8 16.0 31.8 43 130 A I H < S+ 0 0 112 -4,-3.0 -3,-0.2 -5,-0.2 2,-0.2 0.929 125.0 33.5 -72.9 -51.5 40.9 19.2 31.7 44 131 A E S < S- 0 0 121 -4,-1.6 3,-0.1 -5,-0.3 0, 0.0 -0.495 114.2 -71.3 -93.9 175.3 38.3 21.4 30.0 45 132 A G - 0 0 51 -2,-0.2 2,-0.4 1,-0.1 -1,-0.3 0.185 55.2 -84.0 -61.0-179.1 34.6 20.7 30.7 46 133 A S E +A 53 0A 10 7,-0.9 7,-3.8 9,-0.2 2,-0.3 -0.754 67.9 160.7 -82.5 135.1 32.6 17.8 29.6 47 134 A S E -A 52 0A 26 -2,-0.4 2,-0.3 5,-0.3 4,-0.1 -0.987 36.9-159.0-156.0 163.6 31.4 18.7 26.1 48 135 A Y E > S-A 51 0A 170 3,-1.7 3,-0.7 -2,-0.3 -2,-0.0 -0.955 87.2 -6.8-147.4 124.7 30.0 17.5 22.9 49 136 A L T 3 S- 0 0 107 -2,-0.3 2,-1.6 1,-0.3 -1,-0.1 0.923 128.4 -60.3 53.7 45.7 30.3 19.5 19.7 50 137 A G T 3 S+ 0 0 61 1,-0.2 -1,-0.3 -3,-0.0 -20,-0.0 -0.253 109.4 117.3 81.3 -53.1 31.7 22.4 21.7 51 138 A Q E < -A 48 0A 149 -2,-1.6 -3,-1.7 -3,-0.7 2,-0.2 -0.121 67.9-111.5 -50.9 145.4 28.7 22.9 24.0 52 139 A P E -A 47 0A 105 0, 0.0 -5,-0.3 0, 0.0 -1,-0.1 -0.534 23.8-157.9 -85.0 148.2 29.4 22.3 27.8 53 140 A L E -A 46 0A 75 -7,-3.8 -7,-0.9 -2,-0.2 0, 0.0 -0.989 16.2-135.3-127.7 128.8 28.0 19.4 29.8 54 141 A P + 0 0 114 0, 0.0 -1,-0.1 0, 0.0 -8,-0.1 0.833 65.3 108.4 -45.9 -53.3 27.7 19.5 33.7 55 142 A F - 0 0 103 4,-0.1 -9,-0.2 1,-0.1 2,-0.1 0.116 59.6-138.0 -39.5 136.9 29.0 16.0 34.7 56 143 A S > - 0 0 55 1,-0.1 4,-1.5 -11,-0.1 5,-0.1 -0.456 32.6-100.7 -89.3 168.4 32.4 15.7 36.4 57 144 A M H > S+ 0 0 81 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.867 123.3 50.3 -57.1 -34.7 34.8 13.0 35.5 58 145 A T H > S+ 0 0 85 2,-0.2 4,-2.2 1,-0.2 3,-0.5 0.984 111.6 39.2 -69.4 -63.1 33.6 11.2 38.6 59 146 A T H > S+ 0 0 54 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.737 113.4 65.4 -61.7 -17.4 29.8 11.2 38.3 60 147 A L H X S+ 0 0 54 -4,-1.5 4,-1.5 2,-0.2 -1,-0.2 0.953 105.3 37.3 -70.3 -48.4 30.7 10.6 34.7 61 148 A I H X S+ 0 0 75 -4,-1.7 4,-3.2 -3,-0.5 5,-0.3 0.822 111.5 60.6 -75.5 -27.4 32.2 7.2 35.3 62 149 A W H X S+ 0 0 152 -4,-2.2 4,-2.7 1,-0.2 5,-0.3 0.976 107.3 46.2 -60.0 -48.8 29.6 6.3 38.0 63 150 A I H X S+ 0 0 92 -4,-1.9 4,-2.7 2,-0.2 5,-0.3 0.853 114.5 48.2 -61.4 -35.6 26.9 6.7 35.4 64 151 A E H X>S+ 0 0 121 -4,-1.5 4,-3.3 2,-0.2 5,-0.8 0.985 111.5 47.5 -69.6 -57.3 28.9 4.6 32.9 65 152 A V H X5S+ 0 0 95 -4,-3.2 4,-0.9 1,-0.2 -2,-0.2 0.899 119.7 40.9 -50.5 -43.9 29.7 1.8 35.3 66 153 A L H X5S+ 0 0 118 -4,-2.7 4,-2.3 -5,-0.3 -1,-0.2 0.947 120.9 40.7 -72.9 -46.3 26.1 1.6 36.4 67 154 A V H X5S+ 0 0 71 -4,-2.7 4,-1.4 -5,-0.3 -2,-0.2 0.866 120.4 39.4 -74.2 -36.6 24.5 2.1 33.0 68 155 A I H X5S+ 0 0 67 -4,-3.3 4,-2.9 -5,-0.3 5,-0.2 0.817 116.2 55.9 -80.1 -27.4 26.7 -0.0 30.8 69 156 A G H X> - 0 0 85 1,-0.2 3,-4.4 2,-0.0 4,-1.1 -0.671 56.4-152.6 -85.7 78.2 19.2 -18.4 23.4 81 168 A T T 34 S+ 0 0 68 -2,-2.0 -1,-0.2 1,-0.3 5,-0.1 0.621 88.0 58.9 -27.8 -30.0 22.5 -18.5 21.5 82 169 A E T 3> S+ 0 0 87 1,-0.2 4,-0.6 2,-0.1 -1,-0.3 0.481 108.8 42.0 -86.8 -1.2 20.8 -17.2 18.4 83 170 A K T <4 S+ 0 0 83 -3,-4.4 -2,-0.2 2,-0.2 -1,-0.2 0.496 97.2 74.1-114.3 -13.0 19.6 -14.0 20.1 84 171 A R T < S+ 0 0 38 -4,-1.1 -2,-0.1 2,-0.2 -3,-0.1 0.537 115.4 27.1 -73.5 -5.6 22.9 -13.5 21.8 85 172 A L T 4 S+ 0 0 5 -4,-0.1 -2,-0.2 -75,-0.0 -1,-0.2 0.635 138.6 24.2-122.5 -39.0 24.0 -12.5 18.3 86 173 A Y < + 0 0 52 -4,-0.6 -2,-0.2 1,-0.1 -4,-0.1 -0.435 65.0 172.1-130.7 60.8 20.8 -11.3 16.7 87 174 A P + 0 0 43 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.731 21.9 174.4 -39.6 -33.6 18.6 -10.1 19.6 88 175 A G > + 0 0 26 3,-0.2 3,-1.3 1,-0.1 2,-0.4 0.013 35.8 82.4 49.2-164.3 16.1 -8.7 17.2 89 176 A G G > S+ 0 0 62 1,-0.3 3,-2.0 3,-0.2 6,-0.2 -0.604 111.2 6.6 77.7-125.2 12.9 -7.3 18.6 90 177 A T G 3 S+ 0 0 129 -2,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.803 129.4 64.8 -62.0 -27.1 13.2 -3.8 20.0 91 178 A F G < S+ 0 0 163 -3,-1.3 -1,-0.3 1,-0.3 -3,-0.2 0.304 105.8 43.2 -78.6 8.1 16.7 -3.9 18.5 92 179 A D X + 0 0 43 -3,-2.0 3,-0.7 -5,-0.1 -1,-0.3 -0.343 65.9 154.0-149.5 59.7 15.2 -4.2 15.0 93 180 A P T 3 S+ 0 0 106 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.974 77.6 49.8 -52.4 -66.4 12.3 -1.6 14.9 94 181 A L T 3 S- 0 0 145 1,-0.1 4,-0.1 3,-0.0 -2,-0.0 0.690 104.0-138.2 -49.2 -18.5 12.3 -1.1 11.1 95 182 A G X + 0 0 21 -3,-0.7 3,-1.5 -6,-0.2 4,-0.5 0.833 48.1 153.8 62.2 34.6 12.3 -4.9 11.0 96 183 A L T 3 S+ 0 0 110 1,-0.3 3,-0.2 2,-0.1 10,-0.1 0.846 74.8 43.2 -62.8 -34.1 14.9 -5.0 8.2 97 184 A A T 3 S+ 0 0 29 1,-0.2 -1,-0.3 5,-0.1 6,-0.1 0.134 85.7 99.5 -99.4 20.9 16.0 -8.4 9.2 98 185 A S < + 0 0 83 -3,-1.5 -1,-0.2 -4,-0.1 -2,-0.1 0.986 62.7 78.5 -68.2 -57.5 12.5 -9.8 9.8 99 186 A D S >> S- 0 0 61 -4,-0.5 4,-1.9 -3,-0.2 3,-1.2 -0.348 77.0-143.9 -57.4 115.8 12.2 -11.7 6.5 100 187 A P T 34 S+ 0 0 93 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.659 96.7 57.9 -55.2 -23.6 14.2 -14.9 6.8 101 188 A E T 34 S+ 0 0 162 2,-0.1 4,-0.4 1,-0.1 -2,-0.1 0.812 109.3 44.6 -80.0 -29.3 15.4 -14.8 3.2 102 189 A K T X> S+ 0 0 113 -3,-1.2 4,-1.9 1,-0.1 3,-1.1 0.880 94.6 80.6 -79.6 -39.4 17.0 -11.4 3.7 103 190 A K H 3X S+ 0 0 68 -4,-1.9 4,-2.8 1,-0.3 5,-0.3 0.811 89.1 50.8 -35.0 -57.3 18.6 -12.3 7.1 104 191 A P H 3> S+ 0 0 82 0, 0.0 4,-1.3 0, 0.0 -1,-0.3 0.887 112.2 47.4 -54.5 -41.0 21.7 -14.2 5.7 105 192 A I H X> S+ 0 0 117 -3,-1.1 4,-2.0 -4,-0.4 3,-0.9 0.982 113.3 47.2 -63.7 -55.6 22.5 -11.3 3.3 106 193 A L H 3X S+ 0 0 72 -4,-1.9 4,-2.6 1,-0.3 -1,-0.2 0.884 112.3 50.5 -52.5 -44.0 22.2 -8.6 6.0 107 194 A Q H 3X S+ 0 0 44 -4,-2.8 4,-1.9 -5,-0.3 -1,-0.3 0.768 107.4 54.4 -67.5 -26.4 24.3 -10.7 8.4 108 195 A L H X S+ 0 0 37 -4,-2.7 4,-1.8 2,-0.2 3,-1.1 0.941 113.0 43.6 -61.5 -55.3 45.6 2.9 17.1 126 213 A V H 3X S+ 0 0 81 -4,-2.3 4,-2.2 1,-0.3 5,-0.2 0.889 110.6 58.1 -61.9 -35.6 49.0 2.0 15.6 127 214 A Q H 3X S+ 0 0 87 -4,-3.4 4,-1.4 -5,-0.2 6,-0.6 0.707 104.5 52.3 -68.3 -17.7 48.8 5.2 13.5 128 215 A A H > - 0 0 2 -2,-0.3 4,-2.4 -3,-0.1 3,-0.6 -0.349 31.1-117.0 -75.4 153.7 44.8 11.9 14.3 135 222 A P H 3> S+ 0 0 5 0, 0.0 4,-2.6 0, 0.0 5,-0.2 0.920 115.6 53.7 -52.0 -52.4 43.5 9.4 11.6 136 223 A L H 3> S+ 0 0 46 1,-0.2 4,-2.2 2,-0.2 5,-0.1 0.832 111.3 48.8 -54.6 -32.3 41.5 12.1 9.7 137 224 A N H <> S+ 0 0 57 -3,-0.6 4,-1.8 2,-0.2 -1,-0.2 0.956 109.1 48.9 -72.3 -53.2 44.8 14.1 9.6 138 225 A N H X S+ 0 0 28 -4,-2.4 4,-2.6 1,-0.2 -2,-0.2 0.872 113.8 51.1 -53.2 -37.7 47.0 11.2 8.3 139 226 A W H X S+ 0 0 148 -4,-2.6 4,-1.9 -5,-0.2 -1,-0.2 0.965 112.0 41.4 -66.9 -54.9 44.3 10.6 5.7 140 227 A V H X S+ 0 0 81 -4,-2.2 4,-1.3 1,-0.2 -1,-0.2 0.677 115.7 55.8 -69.1 -12.6 44.0 14.1 4.4 141 228 A T H X S+ 0 0 52 -4,-1.8 4,-1.4 2,-0.2 -2,-0.2 0.923 107.3 45.0 -81.4 -47.3 47.8 14.2 4.6 142 229 A H H < S+ 0 0 83 -4,-2.6 -2,-0.2 1,-0.2 -3,-0.2 0.785 114.7 51.8 -65.8 -28.7 48.4 11.1 2.5 143 230 A L H < S+ 0 0 102 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.905 103.5 54.8 -76.4 -40.9 45.8 12.5 0.0 144 231 A S H < S+ 0 0 99 -4,-1.3 -2,-0.2 1,-0.3 -1,-0.2 0.851 133.4 9.1 -59.7 -34.1 47.4 15.9 -0.3 145 232 A D < + 0 0 68 -4,-1.4 3,-0.3 1,-0.1 -1,-0.3 -0.557 69.9 179.9-151.3 79.5 50.7 14.3 -1.3 146 233 A P S > S+ 0 0 68 0, 0.0 3,-0.7 0, 0.0 -1,-0.1 0.802 81.1 47.8 -47.1 -43.9 50.4 10.5 -1.9 147 234 A L G > S+ 0 0 137 1,-0.2 3,-0.5 2,-0.1 -5,-0.1 0.879 114.1 41.4 -73.5 -40.1 54.0 9.9 -2.7 148 235 A H G 3 S+ 0 0 131 -3,-0.3 -1,-0.2 1,-0.2 -6,-0.0 -0.029 107.0 61.3-101.9 32.6 55.8 11.7 0.1 149 236 A T G < S+ 0 0 39 -3,-0.7 -1,-0.2 -7,-0.1 -2,-0.1 0.106 74.1 121.2-139.3 19.1 53.5 10.7 3.0 150 237 A T S X S- 0 0 49 -3,-0.5 3,-0.7 1,-0.1 4,-0.1 -0.187 77.1-107.0 -79.0 176.7 54.0 6.9 3.0 151 238 A I T 3 S+ 0 0 120 1,-0.2 4,-0.5 2,-0.1 3,-0.2 0.372 112.2 74.3 -85.6 5.0 55.2 4.7 5.8 152 239 A L T 3> S+ 0 0 103 1,-0.2 4,-3.0 2,-0.2 3,-0.3 0.684 79.3 70.0 -88.6 -20.5 58.5 4.3 3.9 153 240 A D T <4 S+ 0 0 69 -3,-0.7 -1,-0.2 1,-0.2 -2,-0.1 0.679 91.0 65.2 -68.6 -15.8 59.6 7.8 4.7 154 241 A R T 4 S+ 0 0 147 -3,-0.2 -1,-0.2 1,-0.1 -2,-0.2 0.917 114.1 26.5 -71.7 -45.5 60.0 6.5 8.2 155 242 A F T 4 0 0 159 -4,-0.5 -2,-0.2 -3,-0.3 -1,-0.1 0.802 360.0 360.0 -86.1 -32.4 62.8 4.1 7.3 156 243 A L < 0 0 152 -4,-3.0 -1,-0.2 -5,-0.1 -4,-0.0 -0.802 360.0 360.0-101.4 360.0 63.9 6.2 4.4