==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 12-JUN-03 1PN5 . COMPND 2 MOLECULE: NACHT-, LRR- AND PYD-CONTAINING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.HILLER,A.KOHL,F.FIORITO,T.HERRMANN,G.WIDER,J.TSCHOPP, . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6379.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 64.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 15.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 40.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 59 A M 0 0 204 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 143.1 -2.9 13.0 -1.4 2 60 A A - 0 0 83 5,-0.1 2,-0.2 1,-0.1 3,-0.0 -0.252 360.0-144.0 -71.0 176.2 -1.8 11.3 1.8 3 61 A G - 0 0 33 -2,-0.1 -1,-0.1 1,-0.0 5,-0.1 -0.675 35.8 -77.7-132.7-174.7 -1.9 7.4 2.0 4 62 A G S S- 0 0 69 -2,-0.2 -2,-0.0 1,-0.2 -1,-0.0 0.899 120.0 -38.2 -51.0 -46.8 -2.6 4.4 4.1 5 63 A A S S+ 0 0 24 57,-0.1 -1,-0.2 2,-0.0 57,-0.1 -0.200 138.3 62.2-172.5 65.0 0.9 5.3 5.5 6 64 A W > + 0 0 84 3,-0.1 3,-2.1 52,-0.0 2,-0.1 0.319 41.7 150.6-150.5 -66.3 2.8 6.4 2.4 7 65 A G T > S+ 0 0 19 1,-0.3 3,-1.5 2,-0.1 4,-0.3 -0.362 92.7 21.0 46.9-113.5 1.7 9.5 0.4 8 66 A R T >> S+ 0 0 155 1,-0.3 3,-1.5 2,-0.2 4,-1.5 0.608 108.3 86.5 -47.8 -22.0 5.1 10.7 -1.0 9 67 A L H X> S+ 0 0 19 -3,-2.1 4,-1.7 1,-0.3 3,-0.5 0.932 88.7 48.1 -49.4 -51.1 6.5 7.2 -0.4 10 68 A A H <4 S+ 0 0 14 -3,-1.5 -1,-0.3 1,-0.2 41,-0.2 0.614 102.0 64.6 -72.6 -11.2 5.2 6.1 -3.8 11 69 A C H X> S+ 0 0 42 -3,-1.5 3,-1.7 -4,-0.3 4,-0.8 0.892 103.4 46.7 -72.9 -42.4 6.7 9.2 -5.5 12 70 A Y H XX S+ 0 0 22 -4,-1.5 3,-1.4 -3,-0.5 4,-0.8 0.964 112.0 52.9 -57.7 -46.0 10.2 7.9 -4.5 13 71 A L H 3< S+ 0 0 8 -4,-1.7 37,-0.4 1,-0.3 -1,-0.3 0.136 98.6 65.6 -77.7 17.1 9.0 4.6 -5.9 14 72 A E H <4 S+ 0 0 123 -3,-1.7 -1,-0.3 36,-0.1 -2,-0.2 0.595 92.4 60.3-102.7 -24.1 8.0 6.4 -9.2 15 73 A F H << S+ 0 0 101 -3,-1.4 2,-0.2 -4,-0.8 -2,-0.2 0.961 105.4 51.0 -67.1 -49.6 11.6 7.2 -10.2 16 74 A L < - 0 0 5 -4,-0.8 34,-0.1 4,-0.1 2,-0.1 -0.616 65.2-174.0 -96.8 151.6 12.7 3.6 -10.3 17 75 A K >> - 0 0 123 -2,-0.2 4,-3.2 32,-0.1 3,-1.9 -0.370 57.9 -55.2-126.8-168.8 11.1 0.6 -12.2 18 76 A K H 3>>S+ 0 0 90 1,-0.3 4,-1.1 2,-0.2 5,-0.5 0.779 118.0 84.0 -54.0 -27.8 11.8 -3.1 -12.2 19 77 A E H 345S- 0 0 152 1,-0.2 -1,-0.3 2,-0.1 -3,-0.0 0.761 126.1 -11.2 -46.2 -35.0 15.5 -2.4 -13.2 20 78 A E H <>5S+ 0 0 61 -3,-1.9 4,-3.0 2,-0.1 -2,-0.2 0.443 122.4 81.2-143.4 -9.1 16.2 -1.9 -9.5 21 79 A L H X5S+ 0 0 4 -4,-3.2 4,-2.1 2,-0.2 -3,-0.2 0.865 100.3 48.4 -61.2 -37.5 12.7 -1.8 -7.7 22 80 A K H X5S+ 0 0 73 -4,-1.1 4,-1.7 -5,-0.3 -1,-0.2 0.962 110.9 48.6 -62.2 -52.8 12.8 -5.6 -7.9 23 81 A E H >X S+ 0 0 81 -4,-1.7 4,-1.0 -3,-0.2 3,-0.8 0.969 110.6 45.2 -74.1 -65.8 14.8 -8.5 -2.9 27 85 A L H >X S+ 0 0 48 -4,-3.1 4,-2.5 1,-0.3 3,-0.8 0.859 109.7 60.0 -50.4 -44.3 17.8 -7.1 -1.0 28 86 A L H 3X S+ 0 0 6 -4,-2.2 4,-3.2 -5,-0.3 -1,-0.3 0.906 102.4 50.2 -40.9 -59.2 15.4 -6.0 1.7 29 87 A A H << S+ 0 0 22 -4,-0.8 -1,-0.2 -3,-0.8 -2,-0.2 0.694 111.4 49.2 -68.8 -20.2 14.2 -9.6 2.3 30 88 A N H << S+ 0 0 107 -4,-1.0 -1,-0.2 -3,-0.8 -2,-0.2 0.926 115.3 41.8 -77.6 -51.3 17.8 -10.7 2.7 31 89 A K H < S+ 0 0 70 -4,-2.5 -2,-0.2 4,-0.1 -3,-0.2 0.918 82.7 153.4 -59.4 -54.1 18.9 -8.0 5.1 32 90 A A >< - 0 0 12 -4,-3.2 3,-1.6 -5,-0.2 7,-0.1 0.630 54.0-123.3 24.2 91.3 15.5 -8.5 6.9 33 91 A H T 3 S+ 0 0 101 1,-0.3 -1,-0.2 32,-0.1 -4,-0.0 0.377 100.1 76.8 -52.9 -8.4 16.3 -7.3 10.5 34 92 A S T 3 S- 0 0 98 -2,-0.1 -1,-0.3 2,-0.0 -2,-0.1 0.985 80.4-157.9 -50.7 -60.1 15.3 -10.6 12.1 35 93 A R < + 0 0 208 -3,-1.6 2,-0.3 1,-0.1 -2,-0.1 0.867 27.6 150.7 59.4 104.1 18.5 -12.5 11.0 36 94 A S - 0 0 92 4,-0.0 2,-2.5 0, 0.0 3,-0.4 -0.947 59.6 -77.2-150.8 170.2 17.8 -16.2 11.0 37 95 A S S S+ 0 0 129 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.262 120.3 43.1 -72.7 50.0 19.1 -19.4 9.2 38 96 A S S S- 0 0 109 -2,-2.5 -1,-0.2 -8,-0.1 3,-0.1 0.216 81.3-147.9-150.2 -45.6 17.1 -18.8 5.9 39 97 A G + 0 0 28 -3,-0.4 2,-0.3 1,-0.3 -2,-0.1 0.851 65.0 90.2 71.2 37.1 17.4 -15.1 5.0 40 98 A E S S- 0 0 159 -9,-0.1 -1,-0.3 -8,-0.1 -10,-0.1 -0.875 70.6-122.7-136.7 173.1 14.0 -14.8 3.3 41 99 A T - 0 0 42 -2,-0.3 2,-0.1 -3,-0.1 -12,-0.0 -0.828 34.2-102.0-109.2 159.0 10.5 -13.9 4.6 42 100 A P S S+ 0 0 117 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 -0.349 86.6 42.5 -74.4 167.1 7.4 -16.1 4.2 43 101 A A S S- 0 0 79 -2,-0.1 -2,-0.1 2,-0.0 0, 0.0 0.903 89.4-103.1 54.9 115.3 4.6 -15.6 1.6 44 102 A Q - 0 0 138 1,-0.1 2,-0.1 2,-0.0 -1,-0.0 -0.228 38.5-107.2 -61.4 142.4 5.8 -14.7 -1.9 45 103 A P + 0 0 60 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.355 34.2 175.6 -72.9 155.4 5.6 -11.1 -3.0 46 104 A E + 0 0 139 6,-0.1 2,-0.5 -2,-0.1 -2,-0.0 0.191 42.2 109.3-142.8 14.1 2.9 -10.0 -5.6 47 105 A K + 0 0 85 1,-0.1 6,-0.0 5,-0.1 0, 0.0 -0.874 30.9 168.1-113.7 120.6 3.2 -6.2 -5.8 48 106 A T + 0 0 89 -2,-0.5 -1,-0.1 4,-0.0 2,-0.1 0.827 53.0 69.6-109.9 -35.1 4.7 -4.7 -9.0 49 107 A S S > S- 0 0 45 1,-0.1 4,-2.4 -32,-0.0 5,-0.2 -0.413 85.7-116.1 -79.2 161.9 4.1 -0.9 -9.0 50 108 A G H > S+ 0 0 4 -37,-0.4 4,-1.6 1,-0.2 -36,-0.1 0.923 119.1 56.3 -56.5 -42.7 6.0 1.4 -6.5 51 109 A M H > S+ 0 0 118 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.857 108.0 47.4 -55.0 -39.9 2.5 2.2 -5.0 52 110 A E H > S+ 0 0 98 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.922 107.1 53.9 -74.8 -42.0 1.9 -1.5 -4.5 53 111 A V H X S+ 0 0 2 -4,-2.4 4,-2.3 2,-0.2 -1,-0.2 0.795 107.4 58.2 -59.5 -25.2 5.4 -2.0 -2.9 54 112 A A H X S+ 0 0 1 -4,-1.6 4,-2.0 2,-0.2 5,-0.2 0.995 109.5 37.0 -66.5 -65.4 4.3 0.9 -0.6 55 113 A S H < S+ 0 0 59 -4,-1.8 4,-0.3 1,-0.2 -2,-0.2 0.669 118.5 56.0 -65.6 -17.0 1.1 -0.7 0.9 56 114 A Y H >X S+ 0 0 20 -4,-1.7 4,-2.5 -5,-0.2 3,-0.9 0.934 106.2 46.8 -70.5 -55.0 3.0 -4.0 0.9 57 115 A L H 3X>S+ 0 0 8 -4,-2.3 4,-2.4 1,-0.3 5,-0.6 0.873 109.0 53.3 -68.2 -34.8 5.9 -2.8 3.0 58 116 A V H 3<5S+ 0 0 35 -4,-2.0 -1,-0.3 3,-0.2 -2,-0.2 0.751 111.5 49.4 -66.2 -23.3 3.7 -1.1 5.6 59 117 A A H <45S+ 0 0 77 -3,-0.9 -2,-0.2 -4,-0.3 -1,-0.2 0.933 108.9 50.3 -78.2 -47.6 2.0 -4.6 5.9 60 118 A Q H <5S- 0 0 75 -4,-2.5 -2,-0.2 2,-0.1 -3,-0.2 0.914 143.6 -17.1 -52.4 -46.5 5.3 -6.4 6.2 61 119 A Y T <5S- 0 0 66 -4,-2.4 2,-0.3 1,-0.3 -3,-0.2 0.665 88.9-107.9-121.8 -77.5 6.3 -4.0 9.0 62 120 A G >< - 0 0 21 -5,-0.6 4,-0.9 1,-0.1 -1,-0.3 -0.872 60.6 -54.9 151.1-172.8 4.5 -0.7 9.5 63 121 A E H > S+ 0 0 144 -2,-0.3 4,-2.6 3,-0.2 5,-0.4 0.919 132.9 55.0 -57.9 -42.9 5.9 2.8 8.7 64 122 A Q H > S+ 0 0 131 1,-0.2 4,-2.9 2,-0.2 5,-0.5 0.983 114.0 28.6 -63.6 -79.6 8.9 2.1 10.9 65 123 A R H 4 S+ 0 0 122 1,-0.2 4,-0.3 3,-0.2 -1,-0.2 0.608 119.8 61.5 -70.5 -5.0 10.6 -1.1 9.7 66 124 A A H X S+ 0 0 0 -4,-0.9 4,-2.4 3,-0.1 -2,-0.2 0.962 119.1 21.7 -65.0 -72.7 9.3 -0.3 6.2 67 125 A W H X S+ 0 0 57 -4,-2.6 4,-2.7 -5,-0.2 5,-0.2 0.898 122.4 55.2 -72.1 -40.6 11.2 3.0 5.9 68 126 A D H < S+ 0 0 104 -4,-2.9 4,-0.4 -5,-0.4 -1,-0.2 0.887 116.9 39.1 -58.2 -40.5 14.0 2.5 8.4 69 127 A L H >> S+ 0 0 10 -5,-0.5 4,-2.5 -4,-0.3 3,-0.7 0.849 111.8 58.7 -77.3 -36.6 15.0 -0.7 6.6 70 128 A A H 3X S+ 0 0 1 -4,-2.4 4,-1.7 1,-0.2 -2,-0.2 0.919 100.6 55.8 -55.8 -45.0 14.3 0.9 3.2 71 129 A L H 3< S+ 0 0 44 -4,-2.7 -1,-0.2 1,-0.2 4,-0.2 0.700 111.2 45.3 -67.1 -20.8 16.9 3.6 4.1 72 130 A H H X> S+ 0 0 68 -3,-0.7 3,-1.8 -4,-0.4 4,-1.2 0.853 105.1 60.6 -75.9 -47.3 19.3 0.7 4.6 73 131 A T H 3X S+ 0 0 0 -4,-2.5 4,-2.0 1,-0.3 -2,-0.2 0.814 100.6 54.9 -61.8 -25.8 18.3 -1.1 1.4 74 132 A W H 3X>S+ 0 0 2 -4,-1.7 4,-2.6 2,-0.2 5,-2.0 0.744 99.7 61.1 -76.2 -21.3 19.4 1.9 -0.7 75 133 A E H <45S+ 0 0 134 -3,-1.8 -2,-0.2 -4,-0.2 -1,-0.2 0.868 105.5 49.6 -65.0 -36.6 22.8 1.6 1.0 76 134 A Q H <5S+ 0 0 63 -4,-1.2 -2,-0.2 1,-0.1 -3,-0.1 0.986 119.0 34.6 -65.9 -59.8 22.9 -1.9 -0.7 77 135 A M H <5S- 0 0 49 -4,-2.0 -2,-0.2 2,-0.1 -3,-0.2 0.928 110.6-114.9 -61.7 -47.8 22.0 -0.7 -4.2 78 136 A G T <5 + 0 0 57 -4,-2.6 2,-0.7 -5,-0.1 3,-0.2 0.724 60.2 148.2 105.9 42.0 23.8 2.7 -4.1 79 137 A L >< + 0 0 32 -5,-2.0 4,-2.1 1,-0.2 3,-0.4 -0.605 3.8 156.8-104.1 70.6 21.0 5.2 -4.3 80 138 A R H > S+ 0 0 218 -2,-0.7 4,-1.5 1,-0.2 -1,-0.2 0.846 72.7 62.9 -60.3 -32.5 22.6 7.9 -2.2 81 139 A S H > S+ 0 0 79 -3,-0.2 4,-3.3 2,-0.2 -1,-0.2 0.911 105.7 44.0 -57.1 -42.3 20.2 10.3 -4.0 82 140 A L H > S+ 0 0 2 -3,-0.4 4,-3.2 1,-0.2 -2,-0.2 0.949 111.4 51.6 -71.8 -48.8 17.2 8.5 -2.5 83 141 A C H < S+ 0 0 25 -4,-2.1 -1,-0.2 2,-0.2 -2,-0.2 0.730 116.2 44.6 -55.3 -27.6 18.8 8.4 1.0 84 142 A A H >X S+ 0 0 45 -4,-1.5 3,-2.5 -5,-0.2 4,-1.5 0.947 113.3 47.0 -76.4 -61.7 19.3 12.1 0.5 85 143 A Q H 3< S+ 0 0 57 -4,-3.3 7,-0.5 1,-0.3 6,-0.5 0.837 107.1 59.6 -49.3 -42.2 15.8 13.0 -0.9 86 144 A A T 3< S+ 0 0 20 -4,-3.2 -1,-0.3 1,-0.2 -2,-0.1 0.645 121.8 24.3 -59.4 -20.1 14.2 10.9 2.0 87 145 A Q T <4 S+ 0 0 151 -3,-2.5 -2,-0.2 -5,-0.2 -1,-0.2 0.412 91.4 103.0-127.2 -7.8 15.9 13.2 4.5 88 146 A E S < S- 0 0 135 -4,-1.5 -3,-0.1 -3,-0.2 -2,-0.1 0.352 87.6-122.3 -66.9 0.9 16.4 16.5 2.5 89 147 A G S S+ 0 0 85 -4,-0.2 -1,-0.1 1,-0.1 -3,-0.1 0.650 91.5 99.2 66.7 13.9 13.4 18.2 4.2 90 148 A A S S- 0 0 56 -5,-0.5 -4,-0.1 0, 0.0 -1,-0.1 0.666 82.6-132.3-115.4 -25.1 12.2 18.5 0.6 91 149 A G S S- 0 0 30 -6,-0.5 -5,-0.1 2,-0.0 2,-0.1 0.861 74.2 -58.8 67.8 41.8 9.6 15.8 -0.3 92 150 A H 0 0 35 -7,-0.5 -80,-0.0 -10,-0.1 -84,-0.0 -0.328 360.0 360.0 67.6-171.4 11.5 15.1 -3.5 93 151 A S 0 0 168 -2,-0.1 -1,-0.0 0, 0.0 -2,-0.0 0.109 360.0 360.0-157.7 360.0 12.0 18.0 -6.0