==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-AUG-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 22-SEP-93 1PNC . COMPND 2 MOLECULE: PLASTOCYANIN; . SOURCE 2 ORGANISM_SCIENTIFIC: POPULUS NIGRA; . AUTHOR B.A.FIELDS,J.M.GUSS,H.C.FREEMAN . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5159.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 60.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 21.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 61 0, 0.0 27,-3.0 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 135.3 -1.4 20.6 27.3 2 2 A D E -a 28 0A 122 25,-0.2 2,-0.4 27,-0.1 27,-0.2 -0.841 360.0-169.4 -97.5 131.6 -2.3 23.9 25.8 3 3 A V E -a 29 0A 1 25,-3.0 27,-3.0 -2,-0.5 2,-0.3 -0.989 15.0-138.2-125.9 124.4 0.4 26.5 25.2 4 4 A L E -aB 30 15A 52 11,-2.7 11,-1.9 -2,-0.4 2,-0.9 -0.620 6.3-144.3 -81.8 138.5 -0.4 30.1 24.2 5 5 A L E S+aB 31 14A 0 25,-2.6 27,-2.6 -2,-0.3 28,-1.8 -0.889 84.1 7.0-102.2 96.3 1.8 31.7 21.5 6 6 A G S S- 0 0 0 7,-2.8 6,-0.2 -2,-0.9 9,-0.2 0.274 94.0-100.1 98.9 136.3 1.9 35.3 22.9 7 7 A A > - 0 0 15 4,-2.6 3,-2.1 25,-0.1 -2,-0.0 -0.354 30.1-104.9 -84.7 167.1 0.4 36.3 26.3 8 8 A D T 3 S+ 0 0 140 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.598 123.2 54.1 -65.3 -14.2 -2.9 37.9 27.0 9 9 A D T 3 S- 0 0 128 2,-0.1 -1,-0.3 24,-0.1 -3,-0.0 0.251 125.1-102.4-101.8 7.6 -1.1 41.1 27.7 10 10 A G < + 0 0 42 -3,-2.1 -2,-0.1 1,-0.3 22,-0.0 0.295 69.6 152.2 87.8 -4.1 0.7 41.0 24.3 11 11 A S - 0 0 57 1,-0.1 -4,-2.6 -5,-0.1 2,-1.6 -0.282 53.8-118.1 -57.6 141.0 4.1 39.7 25.7 12 12 A L S S+ 0 0 59 -6,-0.2 2,-0.3 78,-0.1 -1,-0.1 -0.653 71.9 112.8 -87.8 86.6 6.1 37.7 23.2 13 13 A A S S- 0 0 29 -2,-1.6 -7,-2.8 79,-0.1 2,-0.4 -0.986 70.1-109.6-154.6 161.2 6.1 34.5 25.1 14 14 A F E -B 5 0A 5 79,-0.4 -9,-0.2 -2,-0.3 3,-0.1 -0.772 41.7-126.0 -90.6 133.2 5.0 30.9 25.4 15 15 A V E S+B 4 0A 60 -11,-1.9 -11,-2.7 -2,-0.4 2,-0.2 -0.931 102.4 17.3-128.1 106.7 2.5 30.4 28.2 16 16 A P S S- 0 0 52 0, 0.0 -1,-0.3 0, 0.0 3,-0.1 0.641 82.4-178.6 -76.2 163.7 3.5 28.3 30.0 17 17 A S S S+ 0 0 49 1,-0.3 78,-2.4 -2,-0.2 2,-0.4 0.718 70.9 41.2-100.3 -28.3 7.1 28.3 28.8 18 18 A E E S+d 95 0B 139 76,-0.2 2,-0.3 -4,-0.1 -1,-0.3 -0.997 73.8 138.3-124.4 128.6 8.5 25.5 30.9 19 19 A F E -d 96 0B 22 76,-1.4 78,-2.1 -2,-0.4 2,-0.4 -0.963 40.2-127.6-161.5 163.1 6.5 22.3 31.5 20 20 A S E +d 97 0B 75 -2,-0.3 2,-0.3 76,-0.2 78,-0.2 -0.924 26.1 175.8-119.8 142.7 6.8 18.5 31.7 21 21 A I E -d 98 0B 2 76,-2.4 78,-2.2 -2,-0.4 3,-0.0 -0.821 27.6-114.2-137.1 171.7 4.7 16.0 29.8 22 22 A S > - 0 0 64 -2,-0.3 3,-1.9 76,-0.2 52,-0.3 -0.707 52.4 -74.0-106.6 159.3 4.6 12.2 29.4 23 23 A P T 3 S+ 0 0 57 0, 0.0 52,-0.3 0, 0.0 3,-0.1 -0.324 120.2 16.9 -55.6 134.3 5.4 10.4 26.2 24 24 A G T 3 S+ 0 0 54 50,-2.4 2,-0.3 1,-0.3 51,-0.1 0.226 87.9 140.4 86.1 -10.1 2.6 10.7 23.6 25 25 A E < - 0 0 75 -3,-1.9 49,-0.7 49,-0.4 -1,-0.3 -0.461 54.1-120.0 -68.9 125.9 1.0 13.7 25.4 26 26 A K E - C 0 73A 109 -2,-0.3 2,-0.5 47,-0.2 47,-0.2 -0.475 20.5-161.0 -70.5 138.1 -0.3 16.2 23.0 27 27 A I E - C 0 72A 0 45,-2.0 45,-2.2 -2,-0.2 2,-0.6 -0.991 6.0-163.9-116.3 122.4 1.1 19.8 23.1 28 28 A V E -aC 2 71A 18 -27,-3.0 -25,-3.0 -2,-0.5 2,-0.6 -0.944 1.3-162.9-115.4 108.4 -1.2 22.3 21.3 29 29 A F E -aC 3 70A 0 41,-3.2 41,-2.3 -2,-0.6 2,-0.5 -0.839 15.5-165.8 -88.6 118.9 0.6 25.6 20.6 30 30 A K E -aC 4 69A 87 -27,-3.0 -25,-2.6 -2,-0.6 39,-0.2 -0.946 23.4-118.1-120.4 126.3 -2.1 28.2 19.8 31 31 A N E +a 5 0A 2 37,-3.1 36,-2.4 -2,-0.5 -25,-0.1 -0.353 47.8 151.7 -55.4 125.9 -1.8 31.6 18.2 32 32 A N - 0 0 18 -27,-2.6 2,-0.3 1,-0.4 -26,-0.2 0.688 56.4 -9.0-123.8 -58.4 -2.9 34.1 20.8 33 33 A A S S+ 0 0 20 -28,-1.8 -1,-0.4 -22,-0.1 -24,-0.1 -0.989 116.7 23.8-149.1 147.4 -1.2 37.5 20.5 34 34 A G S S- 0 0 41 -2,-0.3 -28,-0.1 1,-0.2 -1,-0.1 0.617 92.9-168.9 73.4 15.4 1.6 39.1 18.5 35 35 A F + 0 0 76 -30,-0.1 -1,-0.2 2,-0.1 2,-0.2 -0.212 58.8 90.0 -66.3 161.9 1.3 36.4 15.7 36 36 A P + 0 0 56 0, 0.0 2,-0.3 0, 0.0 28,-0.2 0.429 67.2 153.9 -67.1 152.2 2.6 35.3 13.3 37 37 A H B -G 63 0C 0 26,-1.6 26,-3.2 -2,-0.2 2,-0.3 -0.912 24.3-167.6-142.2 166.0 4.5 32.8 15.4 38 38 A N - 0 0 0 -2,-0.3 2,-0.4 24,-0.2 24,-0.1 -0.879 19.8-128.3-146.5 174.7 6.1 29.4 14.9 39 39 A I + 0 0 0 -2,-0.3 18,-2.5 19,-0.2 2,-0.4 -0.979 26.6 179.9-136.1 114.9 7.6 26.7 17.2 40 40 A V E -E 83 0B 10 43,-3.1 43,-2.3 -2,-0.4 2,-0.4 -0.986 20.7-141.4-123.4 124.5 11.0 25.4 16.4 41 41 A F E -E 82 0B 5 -2,-0.4 2,-0.7 16,-0.3 41,-0.3 -0.730 26.9-118.6 -86.1 132.0 12.8 22.8 18.4 42 42 A D > - 0 0 48 39,-2.6 3,-2.4 -2,-0.4 39,-0.3 -0.644 19.1-148.6 -72.9 110.6 16.6 23.5 18.7 43 43 A E T 3 S+ 0 0 142 -2,-0.7 3,-0.4 1,-0.3 -1,-0.2 0.670 96.9 50.6 -59.2 -19.8 18.2 20.4 17.0 44 44 A D T 3 S+ 0 0 136 1,-0.2 -1,-0.3 37,-0.0 4,-0.1 0.406 109.7 53.0 -97.1 -2.2 21.2 20.6 19.3 45 45 A S S < S+ 0 0 51 -3,-2.4 36,-2.4 36,-0.2 -3,-0.2 -0.206 92.7 76.2-130.9 43.1 19.0 20.8 22.4 46 46 A I S S- 0 0 11 -3,-0.4 34,-0.2 34,-0.2 33,-0.1 -0.859 104.2 -55.8-139.4 163.9 16.6 17.8 22.1 47 47 A P > - 0 0 26 0, 0.0 3,-2.1 0, 0.0 -2,-0.1 -0.220 61.7-120.5 -48.3 124.4 17.3 14.1 22.7 48 48 A S T 3 S+ 0 0 133 1,-0.3 -3,-0.0 -4,-0.1 -5,-0.0 0.657 107.3 46.5 -46.6 -30.4 20.3 13.4 20.4 49 49 A G T 3 S+ 0 0 82 2,-0.1 -1,-0.3 0, 0.0 2,-0.2 0.504 89.0 110.9 -94.2 -5.3 18.7 10.7 18.2 50 50 A V < - 0 0 26 -3,-2.1 2,-0.8 1,-0.1 -4,-0.1 -0.455 68.8-131.3 -74.6 139.9 15.4 12.7 17.8 51 51 A D > - 0 0 67 -2,-0.2 3,-1.8 1,-0.2 4,-0.4 -0.821 11.8-157.7 -89.9 103.1 14.6 14.1 14.3 52 52 A A G >> S+ 0 0 14 -2,-0.8 3,-1.3 1,-0.3 4,-1.3 0.783 88.6 65.5 -55.7 -27.8 13.7 17.7 14.9 53 53 A S G 34 S+ 0 0 89 1,-0.3 -1,-0.3 2,-0.2 5,-0.0 0.747 93.3 59.6 -68.4 -23.5 11.8 17.7 11.6 54 54 A K G <4 S+ 0 0 161 -3,-1.8 -1,-0.3 1,-0.2 -2,-0.2 0.644 120.2 25.5 -78.3 -13.5 9.3 15.2 12.9 55 55 A I T <4 S+ 0 0 15 -3,-1.3 2,-0.3 -4,-0.4 -2,-0.2 0.389 111.3 71.9-129.0 -2.2 8.3 17.6 15.8 56 56 A S < - 0 0 22 -4,-1.3 2,-0.2 -16,-0.1 -16,-0.2 -0.838 66.9-126.7-121.4 157.2 9.0 21.1 14.6 57 57 A M - 0 0 11 -18,-2.5 -16,-0.3 -2,-0.3 2,-0.1 -0.599 44.7-107.2 -86.6 159.4 7.8 23.8 12.2 58 58 A S - 0 0 44 -2,-0.2 -19,-0.2 1,-0.1 27,-0.1 -0.392 31.6-105.8 -78.4 168.0 10.7 25.1 10.0 59 59 A E S S+ 0 0 94 1,-0.2 -1,-0.1 -2,-0.1 -19,-0.1 0.784 123.6 49.0 -67.0 -24.2 12.0 28.6 10.8 60 60 A E S S+ 0 0 145 25,-0.1 -1,-0.2 2,-0.0 2,-0.1 0.740 90.3 95.3 -85.3 -29.8 10.2 29.8 7.7 61 61 A D - 0 0 86 -3,-0.1 2,-0.3 -22,-0.0 -4,-0.1 -0.403 58.8-171.0 -63.1 140.4 6.8 28.1 8.5 62 62 A L - 0 0 72 -24,-0.1 2,-0.6 -2,-0.1 -24,-0.2 -0.997 30.7-136.1-144.1 146.7 4.4 30.4 10.3 63 63 A L B -G 37 0C 9 -26,-3.2 -26,-1.6 -2,-0.3 7,-0.1 -0.902 29.2-177.4 -95.0 115.4 1.0 30.3 12.1 64 64 A N + 0 0 103 -2,-0.6 2,-0.3 -28,-0.2 -1,-0.1 0.653 48.0 60.5 -93.9 -24.0 -0.8 33.3 10.7 65 65 A A S > S- 0 0 49 4,-0.0 3,-2.1 1,-0.0 -34,-0.3 -0.852 84.5-101.3-115.7 153.2 -4.2 33.6 12.4 66 66 A K T 3 S+ 0 0 130 -2,-0.3 -34,-0.2 1,-0.3 3,-0.1 -0.471 113.7 20.7 -62.8 132.8 -5.4 34.0 16.0 67 67 A G T 3 S+ 0 0 28 -36,-2.4 -1,-0.3 1,-0.4 2,-0.1 0.200 90.1 131.8 90.7 -13.0 -6.5 30.5 17.1 68 68 A E < - 0 0 78 -3,-2.1 -37,-3.1 -38,-0.1 -1,-0.4 -0.471 42.7-155.8 -68.6 144.4 -4.4 28.7 14.5 69 69 A T E -C 30 0A 59 -39,-0.2 2,-0.4 -2,-0.1 -39,-0.2 -0.878 28.2-151.7-130.2 163.5 -2.4 25.9 16.1 70 70 A F E -C 29 0A 44 -41,-2.3 -41,-3.2 -2,-0.3 2,-0.4 -0.996 25.4-165.1-127.5 115.8 0.6 23.6 15.8 71 71 A E E +C 28 0A 115 -2,-0.4 2,-0.3 -43,-0.2 -43,-0.2 -0.906 15.3 160.4-109.7 134.9 0.1 20.3 17.5 72 72 A V E -C 27 0A 13 -45,-2.2 -45,-2.0 -2,-0.4 2,-0.4 -0.985 25.0-153.4-153.5 142.6 2.8 17.8 18.4 73 73 A A E -C 26 0A 42 -2,-0.3 2,-0.4 -47,-0.2 -47,-0.2 -0.949 18.2-145.1-114.7 136.2 3.3 14.8 20.7 74 74 A L + 0 0 1 -49,-0.7 -50,-2.4 -2,-0.4 -49,-0.4 -0.864 18.4 177.7-103.7 138.0 6.8 14.0 21.9 75 75 A S + 0 0 77 -2,-0.4 2,-0.1 -52,-0.3 -1,-0.1 0.805 53.6 79.4-101.8 -56.6 7.9 10.4 22.5 76 76 A N S S- 0 0 88 1,-0.1 22,-0.2 -29,-0.1 2,-0.1 -0.380 80.2-118.0 -66.2 134.2 11.5 10.3 23.5 77 77 A K + 0 0 133 -2,-0.1 2,-0.2 20,-0.1 22,-0.2 -0.450 67.6 62.4 -72.4 144.2 12.3 11.1 27.1 78 78 A G E S- F 0 98B 26 20,-2.5 20,-2.7 -2,-0.1 2,-0.4 -0.760 85.4 -41.3 134.0-177.2 14.5 14.1 27.9 79 79 A E E - F 0 97B 108 -2,-0.2 2,-0.5 18,-0.2 18,-0.2 -0.681 43.0-167.4 -89.3 137.4 14.6 17.9 27.7 80 80 A Y E - F 0 96B 2 16,-2.8 16,-2.8 -2,-0.4 2,-0.4 -0.976 4.1-160.3-127.9 115.7 13.5 19.7 24.6 81 81 A S E + F 0 95B 35 -36,-2.4 -39,-2.6 -2,-0.5 2,-0.3 -0.763 19.8 169.5 -96.8 138.1 14.4 23.4 24.1 82 82 A F E -EF 41 94B 3 12,-2.6 12,-2.7 -2,-0.4 2,-0.3 -0.913 10.9-176.6-143.7 168.6 12.3 25.4 21.6 83 83 A Y E -EF 40 93B 24 -43,-2.3 -43,-3.1 -2,-0.3 2,-0.6 -0.965 35.3-104.7-159.5 168.6 11.7 28.9 20.4 84 84 A C > - 0 0 0 8,-2.6 3,-1.0 -2,-0.3 4,-0.5 -0.948 35.3-141.9-100.8 115.0 9.7 31.1 18.1 85 85 A S G > S+ 0 0 34 -2,-0.6 3,-1.2 1,-0.2 4,-0.3 0.892 95.0 42.8 -49.8 -58.2 12.1 32.1 15.2 86 86 A P G 3 S+ 0 0 72 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 0.665 124.9 36.7 -64.8 -16.4 11.0 35.7 14.7 87 87 A H G <>>S+ 0 0 36 -3,-1.0 5,-2.4 5,-0.2 4,-0.6 0.170 79.0 110.5-122.3 15.2 10.8 36.4 18.4 88 88 A Q T X45S+ 0 0 86 -3,-1.2 3,-1.6 -4,-0.5 -3,-0.1 0.924 81.8 48.2 -56.3 -52.6 13.7 34.4 19.8 89 89 A G T 345S+ 0 0 85 -4,-0.3 -1,-0.2 1,-0.3 -2,-0.1 0.812 105.2 60.1 -57.7 -36.8 15.8 37.4 20.8 90 90 A A T 345S- 0 0 73 -4,-0.1 -1,-0.3 2,-0.1 -2,-0.2 0.654 128.4 -99.9 -66.6 -18.8 12.7 39.0 22.4 91 91 A G T <<5S+ 0 0 43 -3,-1.6 2,-1.8 -4,-0.6 -3,-0.2 0.575 71.9 148.5 108.7 16.0 12.7 36.0 24.7 92 92 A M < + 0 0 0 -5,-2.4 -8,-2.6 -8,-0.2 2,-0.3 -0.605 37.2 116.2 -86.1 81.6 10.0 33.8 23.1 93 93 A V E + F 0 83B 63 -2,-1.8 -79,-0.4 -10,-0.2 2,-0.3 -0.895 35.7 175.1-139.2 165.1 11.6 30.5 24.0 94 94 A G E - F 0 82B 10 -12,-2.7 -12,-2.6 -2,-0.3 2,-0.3 -0.952 20.3-134.3-161.3 179.5 10.7 27.5 26.2 95 95 A K E -dF 18 81B 57 -78,-2.4 -76,-1.4 -2,-0.3 2,-0.4 -0.940 11.5-165.3-151.4 125.8 11.7 24.1 27.3 96 96 A V E -dF 19 80B 0 -16,-2.8 -16,-2.8 -2,-0.3 2,-0.5 -0.939 8.8-153.1-114.8 136.4 9.6 20.9 27.7 97 97 A T E -dF 20 79B 34 -78,-2.1 -76,-2.4 -2,-0.4 2,-0.6 -0.953 1.4-156.4-111.0 126.4 10.7 17.9 29.6 98 98 A V E dF 21 78B 2 -20,-2.7 -20,-2.5 -2,-0.5 -76,-0.2 -0.926 360.0 360.0-101.1 115.6 9.4 14.4 28.6 99 99 A N 0 0 120 -78,-2.2 -2,-0.0 -2,-0.6 -79,-0.0 -0.647 360.0 360.0-130.9 360.0 9.7 12.1 31.7