==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PEPTIDE NUCLEIC ACID/DNA 13-OCT-95 1PNN . COMPND 2 MOLECULE: PNA (NH2-P(*C*T*C*T*T*C*T*T*C-HIS-GLY-SER-SER-GLY . SOURCE 2 SYNTHETIC: YES; . AUTHOR L.BETTS,J.M.VEAL . 12 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1692.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 10 A H 0 0 247 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -3.3 1.6 26.9 50.0 2 11 A G - 0 0 75 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.178 360.0 -24.4 65.8 176.9 2.5 25.8 46.4 3 12 A S - 0 0 128 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.222 45.5-157.5 -59.4 145.8 0.6 25.8 43.1 4 13 A S - 0 0 92 1,-0.1 -1,-0.1 0, 0.0 2,-0.0 0.862 5.2-161.3 -95.1 -47.7 -3.2 25.8 43.0 5 14 A G 0 0 81 1,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.031 360.0 360.0 88.8 -33.5 -4.2 24.4 39.5 6 15 A H 0 0 209 -2,-0.0 -1,-0.1 0, 0.0 0, 0.0 0.672 360.0 360.0 -58.3 360.0 -7.8 25.7 39.5 7 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 8 10 C H 0 0 253 0, 0.0 2,-2.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-114.8 5.5 82.1 27.4 9 11 C G + 0 0 72 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.120 360.0 111.8 10.6 -18.1 6.5 83.3 31.1 10 12 C S + 0 0 104 -2,-2.0 0, 0.0 1,-0.1 0, 0.0 -0.539 28.6 176.0 -84.0 143.6 9.5 81.3 32.6 11 13 C S + 0 0 122 -2,-0.2 -1,-0.1 2,-0.0 2,-0.1 0.387 47.0 113.5-114.4 -6.9 13.0 82.6 33.3 12 14 C G 0 0 63 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.469 360.0 360.0 -72.8 148.6 14.5 79.5 35.0 13 15 C H 0 0 246 -2,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.900 360.0 360.0-164.7 360.0 17.3 77.4 33.4