==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 21-NOV-10 3PO0 . COMPND 2 MOLECULE: SMALL ARCHAEAL MODIFIER PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HALOFERAX VOLCANII; . AUTHOR Y.J.JEONG,B.-C.JEONG,H.K.SONG . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4997.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 61.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 20.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 18.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A G 0 0 35 0, 0.0 23,-2.0 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 167.0 5.5 -7.4 -6.4 2 0 A S E +A 23 0A 55 21,-0.2 75,-2.9 19,-0.0 76,-0.3 -0.698 360.0 164.1 -90.3 143.4 2.6 -8.6 -4.4 3 1 A M E -A 22 0A 4 19,-2.6 19,-2.9 -2,-0.3 2,-0.4 -0.941 25.7-124.5-149.7 171.0 0.8 -6.3 -2.0 4 2 A E E -Ab 21 79A 80 74,-2.2 76,-3.2 -2,-0.3 2,-0.5 -0.973 4.9-148.6-132.4 137.4 -2.5 -6.3 -0.2 5 3 A W E -Ab 20 80A 0 15,-2.8 15,-2.5 -2,-0.4 2,-0.5 -0.872 11.3-154.7 -97.1 129.4 -5.4 -3.9 0.1 6 4 A K E -Ab 19 81A 40 74,-2.9 76,-2.1 -2,-0.5 2,-0.3 -0.911 14.2-160.0-102.5 132.3 -7.4 -3.8 3.4 7 5 A L E - b 0 82A 1 11,-2.1 2,-0.3 -2,-0.5 76,-0.1 -0.851 7.6-169.0-116.1 149.0 -11.0 -2.6 3.0 8 6 A F >> - 0 0 57 74,-0.9 3,-1.5 -2,-0.3 4,-0.8 -0.930 42.9 -19.3-138.7 156.9 -13.3 -1.2 5.6 9 7 A A H 3> S- 0 0 52 -2,-0.3 4,-1.7 1,-0.3 3,-0.4 -0.136 126.2 -0.0 51.8-132.6 -16.9 -0.3 6.3 10 8 A D H 3> S+ 0 0 57 1,-0.2 4,-2.5 2,-0.2 -1,-0.3 0.801 133.3 56.9 -58.5 -32.1 -19.0 0.3 3.1 11 9 A L H <> S+ 0 0 4 -3,-1.5 4,-2.0 1,-0.2 6,-0.2 0.901 106.6 47.6 -72.9 -38.0 -16.1 -0.5 0.8 12 10 A A H X>S+ 0 0 8 -4,-0.8 4,-1.5 -3,-0.4 5,-1.1 0.860 113.3 50.5 -64.7 -35.8 -15.5 -3.9 2.3 13 11 A E H <5S+ 0 0 147 -4,-1.7 -2,-0.2 2,-0.2 -1,-0.2 0.931 110.6 47.5 -68.4 -44.1 -19.2 -4.6 2.0 14 12 A V H <5S+ 0 0 40 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.883 117.9 42.3 -64.5 -37.6 -19.3 -3.5 -1.6 15 13 A A H <5S- 0 0 14 -4,-2.0 -1,-0.2 2,-0.2 -2,-0.2 0.693 100.8-133.5 -82.7 -21.8 -16.3 -5.6 -2.5 16 14 A G T <5S+ 0 0 69 -4,-1.5 2,-0.3 1,-0.2 -3,-0.2 0.705 76.7 82.6 74.6 20.6 -17.4 -8.6 -0.4 17 15 A S < - 0 0 31 -5,-1.1 -2,-0.2 -6,-0.2 -1,-0.2 -0.994 60.7-156.7-155.4 146.4 -13.9 -8.8 1.1 18 16 A R S S+ 0 0 151 -2,-0.3 -11,-2.1 1,-0.2 2,-0.4 0.570 89.2 33.8 -98.3 -14.6 -11.8 -7.3 3.8 19 17 A T E -A 6 0A 65 -13,-0.2 2,-0.4 -7,-0.1 -1,-0.2 -0.982 62.6-175.5-145.5 130.9 -8.5 -8.1 2.1 20 18 A V E -A 5 0A 8 -15,-2.5 -15,-2.8 -2,-0.4 2,-0.5 -0.986 15.6-145.5-128.8 124.5 -7.5 -8.3 -1.5 21 19 A R E -A 4 0A 162 -2,-0.4 2,-0.4 -17,-0.2 -17,-0.2 -0.772 19.3-175.1 -89.1 129.6 -4.1 -9.4 -2.8 22 20 A V E -A 3 0A 8 -19,-2.9 -19,-2.6 -2,-0.5 2,-0.5 -0.933 16.5-153.4-121.1 147.9 -2.8 -7.7 -6.0 23 21 A D E +A 2 0A 114 -2,-0.4 -21,-0.2 -21,-0.2 2,-0.2 -0.923 28.6 168.6-122.5 105.4 0.3 -8.5 -8.0 24 22 A V - 0 0 19 -23,-2.0 9,-0.0 -2,-0.5 52,-0.0 -0.602 37.4 -75.5-115.1 170.8 1.6 -5.4 -9.9 25 23 A D > - 0 0 80 -2,-0.2 3,-1.3 1,-0.1 -1,-0.2 -0.074 43.2-109.8 -61.6 163.3 4.7 -4.3 -11.8 26 24 A G T 3 S+ 0 0 79 1,-0.3 48,-0.2 49,-0.0 -1,-0.1 0.687 121.3 45.3 -69.7 -18.2 7.9 -3.4 -10.1 27 25 A D T 3 S+ 0 0 124 46,-0.1 -1,-0.3 2,-0.0 -2,-0.1 0.214 85.9 139.0-108.3 13.6 7.4 0.3 -11.1 28 26 A A < - 0 0 2 -3,-1.3 46,-1.1 1,-0.1 2,-0.2 -0.274 41.7-145.3 -59.7 138.8 3.7 0.3 -10.1 29 27 A T B > -E 73 0B 38 44,-0.2 4,-2.2 1,-0.1 44,-0.2 -0.459 32.6-100.9 -90.2 172.5 2.4 3.3 -8.3 30 28 A V H > S+ 0 0 0 42,-2.2 4,-2.3 39,-0.3 41,-0.2 0.902 127.0 56.1 -58.6 -38.5 -0.3 3.2 -5.6 31 29 A G H > S+ 0 0 11 39,-2.8 4,-2.1 41,-0.2 -1,-0.2 0.878 105.4 50.2 -62.0 -37.2 -2.7 4.3 -8.3 32 30 A D H > S+ 0 0 68 38,-0.4 4,-1.9 2,-0.2 -1,-0.2 0.912 110.1 50.4 -66.7 -40.8 -1.7 1.3 -10.4 33 31 A A H X S+ 0 0 0 -4,-2.2 4,-2.1 1,-0.2 -2,-0.2 0.872 108.6 53.2 -64.2 -34.3 -2.3 -0.9 -7.4 34 32 A L H X S+ 0 0 0 -4,-2.3 4,-2.3 2,-0.2 -2,-0.2 0.913 106.0 51.9 -68.5 -39.3 -5.7 0.7 -6.9 35 33 A D H X S+ 0 0 98 -4,-2.1 4,-2.2 1,-0.2 -1,-0.2 0.892 108.1 52.9 -62.1 -37.3 -6.6 -0.1 -10.5 36 34 A A H X S+ 0 0 35 -4,-1.9 4,-1.9 2,-0.2 -2,-0.2 0.924 107.5 51.4 -62.6 -44.3 -5.7 -3.7 -9.9 37 35 A L H X S+ 0 0 0 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.929 111.2 46.9 -54.2 -48.9 -8.0 -3.8 -6.8 38 36 A V H < S+ 0 0 14 -4,-2.3 7,-0.2 1,-0.2 6,-0.2 0.864 108.1 56.0 -68.9 -33.3 -10.9 -2.4 -8.8 39 37 A G H < S+ 0 0 64 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.896 111.1 44.8 -61.3 -39.4 -10.2 -4.9 -11.7 40 38 A A H < S+ 0 0 57 -4,-1.9 -2,-0.2 1,-0.3 -1,-0.2 0.825 129.9 25.1 -72.8 -31.9 -10.5 -7.7 -9.1 41 39 A H >< + 0 0 50 -4,-1.9 3,-2.3 -5,-0.2 -1,-0.3 -0.661 69.1 177.5-136.8 77.2 -13.6 -6.2 -7.5 42 40 A P G > S+ 0 0 92 0, 0.0 3,-1.8 0, 0.0 4,-0.4 0.683 72.3 75.5 -63.4 -21.4 -15.4 -4.0 -10.1 43 41 A A G 3 S+ 0 0 58 1,-0.3 3,-0.4 2,-0.1 4,-0.3 0.750 89.1 62.6 -57.8 -24.1 -18.3 -3.2 -7.8 44 42 A L G X> S+ 0 0 0 -3,-2.3 4,-1.7 -6,-0.2 3,-1.1 0.717 80.8 86.2 -70.7 -20.1 -15.8 -0.9 -6.1 45 43 A E H <> S+ 0 0 91 -3,-1.8 4,-2.1 1,-0.3 3,-0.4 0.874 87.9 46.2 -53.5 -48.3 -15.4 1.2 -9.2 46 44 A S H 34 S+ 0 0 73 -4,-0.4 -1,-0.3 -3,-0.4 -2,-0.1 0.725 115.3 47.6 -69.9 -20.8 -18.4 3.5 -8.6 47 45 A R H <4 S+ 0 0 109 -3,-1.1 -1,-0.2 -4,-0.3 -2,-0.2 0.718 117.4 39.2 -90.4 -24.7 -17.4 4.2 -5.0 48 46 A V H < S+ 0 0 0 -4,-1.7 8,-2.2 -3,-0.4 2,-0.4 0.814 112.4 48.3 -94.9 -38.9 -13.8 4.9 -5.6 49 47 A F B < -F 55 0C 19 -4,-2.1 6,-0.2 -5,-0.2 -1,-0.1 -0.852 68.7-136.2-114.6 142.7 -13.7 7.0 -8.8 50 48 A G > - 0 0 9 4,-2.9 3,-2.0 -2,-0.4 -2,-0.1 -0.150 46.5 -84.5 -76.2-179.0 -15.6 10.0 -10.0 51 49 A D T 3 S+ 0 0 173 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.808 130.5 57.6 -56.7 -31.7 -17.1 10.4 -13.5 52 50 A D T 3 S- 0 0 119 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.389 118.8-110.5 -82.1 4.0 -13.7 11.7 -14.6 53 51 A G S < S+ 0 0 50 -3,-2.0 2,-0.3 1,-0.3 -2,-0.1 0.582 77.2 132.6 74.4 11.6 -12.0 8.5 -13.5 54 52 A E - 0 0 123 1,-0.1 -4,-2.9 0, 0.0 -1,-0.3 -0.707 67.1 -97.7 -97.0 146.4 -10.2 10.3 -10.7 55 53 A L B -F 49 0C 45 -2,-0.3 -6,-0.2 -6,-0.2 2,-0.1 -0.364 45.5-110.3 -58.3 130.5 -10.1 9.2 -7.1 56 54 A Y > - 0 0 81 -8,-2.2 3,-1.6 1,-0.1 -1,-0.1 -0.397 16.8-129.1 -61.9 140.6 -12.7 10.9 -5.0 57 55 A D T 3 S+ 0 0 147 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 0.774 106.4 59.2 -60.5 -26.5 -11.3 13.4 -2.5 58 56 A H T 3 S+ 0 0 84 2,-0.1 2,-0.5 27,-0.0 -1,-0.3 0.411 83.8 91.9 -90.7 1.0 -13.4 11.7 0.3 59 57 A I S < S- 0 0 11 -3,-1.6 2,-0.7 -11,-0.1 -11,-0.0 -0.849 70.5-143.6 -92.5 127.4 -11.8 8.3 -0.1 60 58 A N E -C 83 0A 90 23,-3.0 23,-2.5 -2,-0.5 2,-0.5 -0.844 14.5-168.0 -97.6 118.4 -8.7 7.8 2.2 61 59 A V E -C 82 0A 10 -2,-0.7 7,-2.4 7,-0.2 2,-0.4 -0.904 6.1-173.1-103.8 127.4 -5.9 5.8 0.7 62 60 A L E -CD 81 67A 43 19,-2.4 19,-2.2 -2,-0.5 2,-0.4 -0.929 14.0-162.3-118.3 146.5 -3.0 4.6 3.0 63 61 A R E > S-CD 80 66A 47 3,-3.0 3,-1.7 -2,-0.4 17,-0.2 -0.984 82.2 -20.1-124.7 117.0 0.2 2.9 2.3 64 62 A N T 3 S- 0 0 78 15,-3.1 16,-0.1 -2,-0.4 3,-0.1 0.857 131.5 -46.2 51.7 41.2 1.9 1.2 5.2 65 63 A G T 3 S+ 0 0 67 14,-0.4 2,-0.3 1,-0.2 -1,-0.3 0.294 120.0 96.4 94.5 -10.3 -0.1 3.3 7.7 66 64 A E E < S-D 63 0A 118 -3,-1.7 -3,-3.0 1,-0.1 -1,-0.2 -0.841 83.8 -90.2-117.8 152.5 0.4 6.7 6.1 67 65 A A E -D 62 0A 87 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.320 48.9-157.5 -55.4 134.5 -1.7 8.9 3.7 68 66 A A - 0 0 14 -7,-2.4 -7,-0.2 4,-0.0 2,-0.2 -0.962 14.4-143.1-126.3 130.1 -0.6 8.0 0.1 69 67 A A > - 0 0 70 -2,-0.4 3,-1.8 1,-0.1 -39,-0.3 -0.584 31.7-117.2 -78.5 152.9 -0.9 10.0 -3.1 70 68 A L T 3 S+ 0 0 50 1,-0.3 -39,-2.8 -2,-0.2 -38,-0.4 0.757 112.9 61.3 -66.5 -20.4 -1.7 7.8 -6.1 71 69 A G T 3 S+ 0 0 65 -41,-0.2 -1,-0.3 -42,-0.2 2,-0.1 0.510 79.2 114.8 -80.8 -4.9 1.7 8.8 -7.6 72 70 A E S < S- 0 0 50 -3,-1.8 -42,-2.2 1,-0.1 -41,-0.2 -0.373 70.5-112.6 -70.2 144.2 3.7 7.2 -4.8 73 71 A A B -E 29 0B 67 -44,-0.2 2,-0.3 -43,-0.1 -44,-0.2 -0.246 29.9-148.2 -66.2 162.2 5.8 4.2 -5.5 74 72 A T - 0 0 16 -46,-1.1 2,-0.3 -48,-0.2 -1,-0.1 -0.783 6.8-156.9-126.0 172.2 5.0 0.8 -4.1 75 73 A A > - 0 0 47 -2,-0.3 3,-2.0 -48,-0.0 -48,-0.0 -0.990 35.8 -84.5-148.9 150.5 7.0 -2.2 -3.0 76 74 A A T 3 S+ 0 0 74 -2,-0.3 -73,-0.2 1,-0.3 -53,-0.0 -0.290 115.8 31.1 -52.5 137.5 6.5 -5.9 -2.5 77 75 A G T 3 S+ 0 0 63 -75,-2.9 -1,-0.3 1,-0.3 -74,-0.2 0.365 84.1 151.9 94.4 -5.3 4.9 -6.5 0.9 78 76 A D < - 0 0 10 -3,-2.0 -74,-2.2 -76,-0.3 2,-0.6 -0.230 38.0-146.2 -59.6 145.8 3.0 -3.2 1.1 79 77 A E E -b 4 0A 104 -76,-0.2 -15,-3.1 -74,-0.0 -14,-0.4 -0.972 21.8-174.3-111.7 113.7 -0.1 -3.0 3.1 80 78 A L E -bC 5 63A 0 -76,-3.2 -74,-2.9 -2,-0.6 2,-0.3 -0.785 2.8-163.2-105.5 149.4 -2.5 -0.6 1.4 81 79 A A E -bC 6 62A 10 -19,-2.2 -19,-2.4 -2,-0.3 2,-0.4 -0.983 12.2-158.4-135.9 149.4 -5.8 0.5 2.9 82 80 A L E -bC 7 61A 0 -76,-2.1 -74,-0.9 -2,-0.3 -21,-0.2 -0.990 14.0-177.6-124.8 121.6 -9.0 2.2 1.7 83 81 A F E - C 0 60A 70 -23,-2.5 -23,-3.0 -2,-0.4 -74,-0.1 -0.974 12.5-149.7-119.3 132.8 -11.3 4.0 4.1 84 82 A P - 0 0 23 0, 0.0 -25,-0.1 0, 0.0 2,-0.1 -0.474 32.1 -95.6 -85.0 165.0 -14.6 5.7 3.2 85 83 A P - 0 0 66 0, 0.0 2,-0.1 0, 0.0 -27,-0.0 -0.439 48.6 -97.4 -73.6 159.9 -16.1 8.7 5.1 86 84 A V - 0 0 131 1,-0.1 -77,-0.0 -2,-0.1 0, 0.0 -0.422 19.2-137.4 -77.4 155.1 -18.6 8.0 7.8 87 85 A S S S+ 0 0 112 -2,-0.1 -1,-0.1 -3,-0.1 2,-0.1 0.791 78.7 84.2 -82.7 -29.8 -22.3 8.2 7.2 88 86 A G 0 0 55 1,-0.1 -2,-0.1 -3,-0.0 0, 0.0 -0.329 360.0 360.0 -73.9 156.8 -23.2 10.0 10.4 89 87 A G 0 0 135 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.381 360.0 360.0 -54.1 360.0 -22.9 13.7 10.8