==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 16-JUN-03 1PP5 . COMPND 2 MOLECULE: MICROCIN J25; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.J.BAYRO,G.V.T.SWAPNA,J.Y.HUANG,L.-C.MA,J.MUKHOPADHYAY,R.H. . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1734.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 38.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 14.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 32 0, 0.0 19,-0.3 0, 0.0 16,-0.2 0.000 360.0 360.0 360.0-105.7 -0.5 3.3 -3.0 2 2 A G - 0 0 54 17,-3.0 18,-0.2 14,-0.1 0, 0.0 0.290 360.0 -0.4-160.0 -43.1 0.4 2.2 -6.5 3 3 A A S S+ 0 0 97 16,-0.9 17,-0.2 15,-0.1 15,-0.0 -0.063 97.4 121.5-152.2 35.1 4.0 3.0 -7.3 4 4 A G - 0 0 20 15,-3.1 17,-0.3 2,-0.2 16,-0.2 0.125 65.7-118.3 -84.2-158.2 5.2 4.6 -4.1 5 5 A H S S+ 0 0 170 15,-2.2 16,-0.2 1,-0.1 -1,-0.1 0.707 90.3 65.0-113.7 -42.5 8.1 3.6 -1.8 6 6 A V E S-A 20 0A 83 14,-2.4 14,-2.8 1,-0.1 2,-0.3 -0.644 90.2-109.8 -87.7 143.3 6.3 2.9 1.5 7 7 A P E -A 19 0A 83 0, 0.0 12,-0.3 0, 0.0 -1,-0.1 -0.551 15.3-153.4 -75.0 131.8 3.8 0.1 1.7 8 8 A E + 0 0 41 10,-2.4 2,-1.5 -2,-0.3 3,-0.4 -0.096 48.5 136.7 -94.3 33.6 0.2 1.2 2.1 9 9 A Y + 0 0 129 1,-0.2 8,-0.0 9,-0.1 -1,-0.0 -0.658 14.3 125.7 -85.5 87.6 -0.7 -2.1 3.8 10 10 A F + 0 0 149 -2,-1.5 -1,-0.2 0, 0.0 2,-0.2 0.549 54.7 75.9-115.1 -18.8 -2.9 -0.8 6.7 11 11 A V S S- 0 0 64 -3,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.527 73.2-136.1 -93.2 162.5 -5.9 -3.0 6.0 12 12 A G S S+ 0 0 81 -2,-0.2 -1,-0.1 2,-0.0 -3,-0.0 0.880 85.4 68.0 -83.4 -43.7 -6.2 -6.7 6.9 13 13 A I S S- 0 0 119 1,-0.1 -2,-0.1 2,-0.0 0, 0.0 0.380 104.4 -92.0 -56.0-157.8 -7.9 -7.8 3.7 14 14 A G S S+ 0 0 55 1,-0.1 -1,-0.1 3,-0.0 3,-0.1 -0.244 92.3 105.7-118.7 42.1 -6.0 -7.7 0.4 15 15 A T + 0 0 98 1,-0.2 2,-1.0 3,-0.0 -1,-0.1 0.944 66.4 63.8 -83.1 -57.3 -6.9 -4.3 -0.8 16 16 A P + 0 0 4 0, 0.0 -1,-0.2 0, 0.0 -14,-0.1 -0.606 55.8 145.3 -75.0 101.1 -3.7 -2.4 -0.1 17 17 A I + 0 0 103 -2,-1.0 2,-0.3 -16,-0.2 -8,-0.1 -0.311 53.0 57.5-132.0 48.0 -1.2 -4.0 -2.5 18 18 A S S S- 0 0 33 -15,-0.0 -10,-2.4 -12,-0.0 2,-0.3 -0.852 73.8-106.1-156.1-171.6 0.9 -1.1 -3.4 19 19 A F E -A 7 0A 87 -12,-0.3 -15,-3.1 -2,-0.3 -17,-3.0 -0.943 20.8-154.7-132.3 153.4 3.2 1.7 -2.1 20 20 A Y E A 6 0A 157 -14,-2.8 -14,-2.4 -2,-0.3 -15,-2.2 -0.767 360.0 360.0-122.7 168.1 2.8 5.5 -1.7 21 21 A G 0 0 75 -17,-0.3 -18,-0.0 -2,-0.3 -2,-0.0 -0.861 360.0 360.0-158.8 360.0 5.2 8.4 -1.5