==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER POLYMORPHIC ANTIGEN 01-DEC-94 1PSM . COMPND 2 MOLECULE: SPAM-H1; . SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; . AUTHOR T.D.MULHERN,R.S.NORTON . 38 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4044.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 18.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 21.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 209 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-152.6 1.7 0.1 -1.0 2 2 A A + 0 0 65 1,-0.1 3,-0.2 3,-0.0 5,-0.1 -0.378 360.0 130.1-132.0 51.4 3.1 3.7 -0.7 3 3 A Y S S- 0 0 152 1,-0.2 2,-0.5 0, 0.0 -1,-0.1 0.994 70.4 -13.6 -70.5 -94.3 2.5 4.7 -4.3 4 4 A K S S+ 0 0 181 2,-0.1 2,-0.3 -3,-0.0 -1,-0.2 -0.954 90.8 104.7-132.1 103.4 0.7 8.0 -5.0 5 5 A K S S- 0 0 109 -2,-0.5 2,-0.8 -3,-0.2 3,-0.1 -0.794 85.7 -74.0-157.7-179.9 -1.0 9.6 -2.0 6 6 A A + 0 0 51 -2,-0.3 3,-0.1 3,-0.2 -2,-0.1 -0.822 46.7 176.8 -90.1 106.7 0.3 12.6 -0.0 7 7 A K S S+ 0 0 114 -2,-0.8 5,-0.2 1,-0.2 -1,-0.2 0.625 80.3 60.5 -89.0 -14.2 3.3 11.2 2.0 8 8 A Q S S+ 0 0 171 1,-0.2 2,-0.7 -3,-0.1 -1,-0.2 0.646 98.6 61.1 -82.9 -23.2 3.9 14.8 3.4 9 9 A A S S+ 0 0 70 -3,-0.1 2,-0.3 4,-0.1 -1,-0.2 -0.837 91.8 76.1-101.9 88.0 0.4 14.8 4.9 10 10 A S S >> S- 0 0 42 -2,-0.7 3,-2.3 -3,-0.1 4,-1.0 -0.905 107.0 -59.3-173.2-173.1 0.6 11.8 7.4 11 11 A Q H 3> S+ 0 0 149 1,-0.3 4,-1.7 -2,-0.3 5,-0.2 0.451 124.7 72.9 -71.2 -0.5 2.2 11.0 10.8 12 12 A D H 34 S+ 0 0 132 -5,-0.2 4,-0.4 2,-0.2 -1,-0.3 0.662 106.7 34.9 -83.0 -22.3 5.6 11.8 9.2 13 13 A A H <4 S+ 0 0 50 -3,-2.3 4,-0.3 2,-0.1 -2,-0.2 0.667 118.7 54.3 -98.7 -22.0 4.5 15.5 9.3 14 14 A E H < S+ 0 0 141 -4,-1.0 4,-0.2 2,-0.2 -2,-0.2 0.831 113.0 38.8 -80.6 -37.9 2.6 15.0 12.6 15 15 A Q S >X S+ 0 0 107 -4,-1.7 4,-2.2 2,-0.2 3,-0.8 0.864 113.8 53.8 -83.3 -34.4 5.5 13.5 14.6 16 16 A A T 34 S+ 0 0 73 -4,-0.4 -1,-0.2 1,-0.3 -2,-0.2 0.567 109.5 50.9 -79.1 -11.6 8.2 15.8 13.2 17 17 A A T 34 S+ 0 0 61 -4,-0.3 4,-0.5 2,-0.1 -1,-0.3 0.548 108.9 52.4 -90.6 -18.2 5.9 18.7 14.2 18 18 A K T X> S+ 0 0 117 -3,-0.8 4,-1.2 -4,-0.2 3,-0.8 0.898 110.1 43.4 -90.3 -43.9 5.6 17.3 17.8 19 19 A D T 3< S+ 0 0 103 -4,-2.2 -1,-0.2 1,-0.2 -3,-0.1 0.264 107.8 66.1 -89.9 16.5 9.4 16.9 18.5 20 20 A A T 34 S+ 0 0 63 -5,-0.2 4,-0.2 2,-0.1 -1,-0.2 0.704 107.0 36.7 -90.8 -36.4 9.7 20.3 17.0 21 21 A E T X> S+ 0 0 87 -3,-0.8 4,-1.2 -4,-0.5 3,-1.0 0.731 102.4 77.2 -82.3 -30.1 7.7 22.1 19.8 22 22 A N H 3X S+ 0 0 48 -4,-1.2 4,-1.3 1,-0.3 -1,-0.1 0.684 89.3 53.4 -67.9 -23.0 9.2 19.8 22.5 23 23 A A H 3> S+ 0 0 53 2,-0.2 4,-3.1 1,-0.2 -1,-0.3 0.798 111.8 45.0 -80.4 -31.0 12.6 21.6 22.7 24 24 A S H <4 S+ 0 0 84 -3,-1.0 -2,-0.2 -4,-0.2 -1,-0.2 0.590 107.7 59.2 -90.3 -13.1 10.9 25.1 23.3 25 25 A K H < S+ 0 0 124 -4,-1.2 3,-0.4 2,-0.1 -2,-0.2 0.876 117.7 32.6 -72.3 -42.4 8.5 23.4 25.8 26 26 A E H >< S+ 0 0 156 -4,-1.3 3,-1.3 1,-0.2 2,-0.8 0.961 122.4 46.8 -71.0 -59.3 11.7 22.5 27.7 27 27 A A T 3< S+ 0 0 90 -4,-3.1 -1,-0.2 1,-0.3 -2,-0.1 -0.133 92.2 83.5 -89.7 44.8 13.8 25.6 26.8 28 28 A E T >> + 0 0 40 -2,-0.8 3,-2.6 -3,-0.4 4,-2.1 0.661 67.1 87.2 -90.2 -39.6 10.9 27.9 27.6 29 29 A E T <4 S+ 0 0 156 -3,-1.3 -2,-0.1 1,-0.3 -3,-0.0 0.429 80.5 54.5 -67.5 -9.3 11.8 28.0 31.3 30 30 A A T 34 S+ 0 0 114 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.663 125.1 26.8 -90.1 -23.3 14.4 30.9 31.3 31 31 A A T <4 S- 0 0 61 -3,-2.6 -2,-0.2 5,-0.0 -3,-0.1 0.831 88.7-157.4 -91.6 -67.5 11.8 33.2 29.6 32 32 A K >< - 0 0 84 -4,-2.1 3,-2.6 1,-0.1 2,-1.0 0.940 1.5-160.9 82.7 67.4 8.5 31.6 30.8 33 33 A E T 3 S+ 0 0 121 1,-0.3 -1,-0.1 2,-0.2 -4,-0.0 -0.026 83.2 69.4 -85.6 36.9 5.9 32.8 28.1 34 34 A A T 3 S+ 0 0 76 -2,-1.0 -1,-0.3 -3,-0.0 -2,-0.1 0.539 111.7 32.4 -91.7 -38.0 2.9 32.2 30.3 35 35 A V S < S+ 0 0 125 -3,-2.6 2,-0.3 -4,-0.0 -2,-0.2 0.187 123.3 49.1-117.3 11.6 4.0 35.1 32.5 36 36 A N + 0 0 70 -4,-0.3 -5,-0.0 0, 0.0 -4,-0.0 -0.921 47.8 163.5-143.2 147.7 5.6 37.2 29.7 37 37 A L 0 0 150 -2,-0.3 -4,-0.0 -3,-0.0 -5,-0.0 -0.320 360.0 360.0-159.3 42.7 3.8 38.0 26.5 38 38 A K 0 0 245 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.974 360.0 360.0-149.0 360.0 6.0 40.9 25.4