==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 09-MAY-07 2PV6 . COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; . AUTHOR Z.-Y.J.SUN,K.J.OH,M.KIM,E.L.REINHERZ,G.WAGNER . 22 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2639.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 90.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 36.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 662 A E 0 0 236 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -64.3 8.7 13.3 7.7 2 663 A L >> - 0 0 101 1,-0.0 4,-0.7 2,-0.0 3,-0.6 -0.823 360.0-157.6-167.6 124.2 5.2 13.8 6.2 3 664 A D H 3> S+ 0 0 128 -2,-0.3 4,-0.8 1,-0.2 -1,-0.0 0.356 81.9 87.5 -86.7 9.4 1.7 13.2 7.5 4 665 A K H 34 S+ 0 0 149 2,-0.2 4,-0.5 1,-0.1 -1,-0.2 0.835 95.5 36.9 -76.6 -30.4 0.3 13.1 3.9 5 666 A W H X> S+ 0 0 133 -3,-0.6 4,-2.2 2,-0.2 3,-0.8 0.857 109.3 60.2 -88.9 -38.4 1.0 9.3 3.7 6 667 A A H 3X S+ 0 0 50 -4,-0.7 4,-1.0 1,-0.2 -2,-0.2 0.817 100.2 59.8 -59.9 -26.3 0.2 8.4 7.3 7 668 A S H 3X S+ 0 0 83 -4,-0.8 4,-0.7 2,-0.2 -1,-0.2 0.871 109.6 41.3 -71.0 -34.0 -3.4 9.7 6.6 8 669 A L H X> S+ 0 0 75 -3,-0.8 3,-2.1 -4,-0.5 4,-1.7 0.968 106.6 57.9 -78.3 -56.0 -3.9 7.2 3.7 9 670 A W H 3< S+ 0 0 144 -4,-2.2 -1,-0.2 1,-0.3 6,-0.2 0.845 98.7 65.6 -45.1 -29.4 -2.3 4.1 5.3 10 671 A N H >< S+ 0 0 131 -4,-1.0 3,-0.5 -5,-0.3 -1,-0.3 0.946 102.5 45.3 -59.6 -42.4 -4.9 4.7 8.0 11 672 A W H << S+ 0 0 176 -3,-2.1 2,-1.1 -4,-0.7 3,-0.3 0.833 105.4 65.3 -68.5 -29.1 -7.6 3.9 5.4 12 673 A F T >< + 0 0 74 -4,-1.7 3,-1.3 1,-0.2 -1,-0.3 -0.267 58.2 143.0 -88.3 51.9 -5.4 0.9 4.3 13 674 A N T X> + 0 0 113 -2,-1.1 3,-1.6 -3,-0.5 4,-0.6 0.704 56.2 81.2 -65.1 -14.4 -5.9 -0.9 7.7 14 675 A I H >> + 0 0 77 -3,-0.3 3,-1.7 1,-0.3 4,-1.3 0.889 68.2 79.3 -59.5 -38.0 -6.0 -4.1 5.6 15 676 A T H <4 S+ 0 0 73 -3,-1.3 -1,-0.3 1,-0.3 3,-0.2 0.826 87.8 60.3 -45.3 -23.8 -2.1 -4.2 5.5 16 677 A N H X4 S+ 0 0 108 -3,-1.6 3,-2.1 1,-0.3 -1,-0.3 0.963 98.3 55.8 -67.0 -43.3 -2.5 -5.6 9.0 17 678 A W H X< S+ 0 0 120 -3,-1.7 3,-2.3 -4,-0.6 -1,-0.3 0.776 84.7 87.3 -56.4 -23.7 -4.5 -8.4 7.4 18 679 A L G >< + 0 0 66 -4,-1.3 3,-2.1 1,-0.3 4,-0.4 0.654 60.8 88.1 -55.8 -9.9 -1.3 -8.9 5.3 19 680 A W G X S+ 0 0 159 -3,-2.1 3,-0.7 1,-0.3 -1,-0.3 0.732 71.9 75.8 -63.7 -12.9 -0.0 -11.2 8.1 20 681 A Y G < S+ 0 0 106 -3,-2.3 -1,-0.3 1,-0.2 -2,-0.2 0.539 79.0 73.1 -74.3 -2.8 -1.8 -13.9 6.1 21 682 A I G < 0 0 117 -3,-2.1 -1,-0.2 -4,-0.1 -2,-0.2 0.871 360.0 360.0 -79.5 -36.1 1.0 -13.8 3.5 22 683 A K < 0 0 220 -3,-0.7 0, 0.0 -4,-0.4 0, 0.0 -0.690 360.0 360.0 -99.0 360.0 3.6 -15.6 5.8