==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 02-JUL-03 1PWJ . COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN-2; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR W.WANG,K.W.-H.LO,H.-M.KAN,J.-S.FAN,M.ZHANG . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6064.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 64.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 21.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 30.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 227 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-172.9 11.3 21.3 4.7 2 2 A S + 0 0 95 1,-0.0 2,-0.1 2,-0.0 0, 0.0 -0.389 360.0 126.9 -59.4 117.2 10.0 18.3 6.7 3 3 A D + 0 0 85 -2,-0.3 2,-0.1 76,-0.0 76,-0.0 -0.489 25.9 172.3-177.7 100.3 8.3 15.9 4.3 4 4 A R - 0 0 174 -2,-0.1 75,-0.1 2,-0.0 3,-0.1 -0.412 30.7-133.5-103.9-177.9 9.0 12.2 3.9 5 5 A K S S+ 0 0 82 73,-0.2 2,-0.2 1,-0.2 73,-0.1 -0.303 79.4 60.4-134.4 50.4 7.3 9.5 1.8 6 6 A A + 0 0 50 20,-0.0 2,-0.2 72,-0.0 72,-0.2 -0.650 43.5 151.4-177.8 115.6 6.9 6.6 4.3 7 7 A V E -A 77 0A 83 70,-1.5 70,-3.3 -2,-0.2 2,-0.7 -0.697 24.6-157.0-155.3 96.4 5.0 6.3 7.6 8 8 A I E + 0 0 62 68,-0.3 68,-0.2 -2,-0.2 3,-0.2 -0.653 11.6 179.0 -79.2 112.4 3.6 3.0 8.8 9 9 A K E S- 0 0 164 -2,-0.7 2,-0.2 1,-0.3 -1,-0.2 0.805 75.7 -6.5 -81.0 -32.4 0.8 3.7 11.2 10 10 A N E -A 75 0A 83 65,-0.6 65,-2.0 0, 0.0 2,-0.6 -0.747 63.1-167.0-168.5 114.6 0.1 -0.0 11.8 11 11 A A E +A 74 0A 34 -2,-0.2 63,-0.2 63,-0.2 65,-0.0 -0.927 15.8 166.2-112.5 118.0 1.5 -3.1 10.1 12 12 A D + 0 0 83 -2,-0.6 62,-0.2 61,-0.5 -1,-0.1 0.559 55.2 92.7-100.9 -13.7 -0.2 -6.4 10.6 13 13 A M S S- 0 0 24 60,-0.4 2,-1.3 1,-0.1 -2,-0.1 -0.190 100.6 -87.6 -75.3 170.9 1.6 -8.1 7.7 14 14 A S - 0 0 83 1,-0.2 2,-2.6 60,-0.0 -1,-0.1 -0.041 61.2-106.0 -73.4 38.0 4.9 -10.1 8.1 15 15 A E S >> S+ 0 0 135 -2,-1.3 4,-1.8 1,-0.2 3,-1.5 -0.087 107.3 95.5 68.6 -43.9 6.9 -6.9 7.6 16 16 A D H 3> S+ 0 0 77 -2,-2.6 4,-3.1 1,-0.3 -1,-0.2 0.851 84.3 50.5 -45.4 -40.2 7.9 -8.0 4.1 17 17 A M H 3>>S+ 0 0 13 2,-0.2 4,-2.7 1,-0.2 5,-0.7 0.801 102.7 60.1 -71.9 -26.4 5.0 -6.0 2.8 18 18 A Q H <>5S+ 0 0 45 -3,-1.5 4,-1.3 3,-0.2 -2,-0.2 0.937 115.2 34.7 -64.8 -42.6 6.2 -2.9 4.7 19 19 A Q H X5S+ 0 0 128 -4,-1.8 4,-1.6 3,-0.2 -2,-0.2 0.882 126.0 41.6 -77.1 -40.1 9.4 -3.1 2.8 20 20 A D H X5S+ 0 0 53 -4,-3.1 4,-3.1 -5,-0.3 5,-0.2 0.977 119.0 42.5 -71.0 -57.7 7.8 -4.3 -0.4 21 21 A A H X5S+ 0 0 0 -4,-2.7 4,-2.9 2,-0.2 5,-0.2 0.925 115.7 49.8 -55.2 -49.8 4.8 -2.0 -0.4 22 22 A V H X S+ 0 0 142 1,-0.2 4,-1.4 -7,-0.1 -1,-0.2 -0.287 91.2 53.7 76.6 -54.5 -2.4 7.2 -9.0 36 36 A K H > S+ 0 0 175 -2,-2.4 4,-1.3 2,-0.2 -1,-0.2 0.945 104.2 51.4 -74.8 -50.2 -4.3 4.3 -10.6 37 37 A D H > S+ 0 0 67 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.813 106.2 60.5 -56.3 -29.6 -1.4 2.7 -12.3 38 38 A I H > S+ 0 0 9 1,-0.2 4,-1.8 2,-0.2 3,-0.3 0.969 102.2 47.2 -62.3 -56.1 0.4 2.8 -9.0 39 39 A A H X S+ 0 0 23 -4,-1.4 4,-2.1 1,-0.2 17,-0.3 0.743 112.2 54.7 -58.6 -22.7 -2.1 0.6 -7.2 40 40 A A H X S+ 0 0 30 -4,-1.3 4,-2.8 2,-0.2 -1,-0.2 0.888 105.5 48.5 -78.7 -41.5 -1.8 -1.7 -10.2 41 41 A Y H X S+ 0 0 68 -4,-2.1 4,-1.5 -3,-0.3 -2,-0.2 0.788 116.3 46.1 -68.8 -26.4 2.0 -2.1 -9.9 42 42 A I H X S+ 0 0 0 -4,-1.8 4,-1.9 2,-0.2 -2,-0.2 0.923 118.1 39.3 -80.3 -48.3 1.6 -2.8 -6.2 43 43 A K H X S+ 0 0 81 -4,-2.1 4,-1.2 -5,-0.2 -2,-0.2 0.839 117.3 52.8 -69.7 -32.7 -1.3 -5.2 -6.6 44 44 A K H X S+ 0 0 116 -4,-2.8 4,-3.2 2,-0.2 -1,-0.2 0.918 108.3 48.9 -68.2 -45.0 0.4 -6.7 -9.6 45 45 A E H < S+ 0 0 66 -4,-1.5 -2,-0.2 1,-0.2 -1,-0.2 0.905 118.6 39.2 -61.7 -43.4 3.7 -7.2 -7.9 46 46 A F H X S+ 0 0 1 -4,-1.9 4,-1.1 3,-0.2 -1,-0.2 0.656 118.4 50.5 -81.2 -16.7 2.0 -8.9 -4.9 47 47 A D H X S+ 0 0 55 -4,-1.2 4,-0.7 -5,-0.2 -2,-0.2 0.873 112.3 42.7 -87.0 -43.0 -0.4 -10.8 -7.2 48 48 A K H < S+ 0 0 150 -4,-3.2 -1,-0.2 3,-0.1 -2,-0.1 0.113 126.5 35.1 -90.3 21.8 2.1 -12.2 -9.7 49 49 A K H 4 S+ 0 0 144 -3,-0.2 -3,-0.2 -5,-0.1 -2,-0.2 0.524 128.4 26.4-138.0 -42.9 4.5 -13.2 -6.9 50 50 A Y H < S- 0 0 111 -4,-1.1 -3,-0.2 -5,-0.2 -2,-0.1 0.241 106.4-117.5-111.3 10.6 2.4 -14.2 -3.8 51 51 A N < - 0 0 114 -4,-0.7 -3,-0.1 2,-0.0 -1,-0.0 0.516 51.2 -33.2 62.5 142.7 -0.7 -15.4 -5.7 52 52 A P S S+ 0 0 53 0, 0.0 35,-0.1 0, 0.0 3,-0.1 0.128 82.5 61.2 -50.0 173.9 -4.1 -13.7 -5.3 53 53 A T + 0 0 80 1,-0.2 35,-2.0 33,-0.1 2,-0.1 0.143 57.4 122.6-125.2 112.3 -6.1 -12.3 -3.8 54 54 A W B -B 87 0A 28 33,-0.3 33,-0.3 -11,-0.2 -1,-0.2 -0.245 34.7-155.4-102.3-167.3 -5.1 -8.9 -2.4 55 55 A H - 0 0 80 31,-1.4 31,-0.4 -2,-0.1 2,-0.3 -0.427 9.0-168.5-176.1 90.9 -6.4 -5.4 -2.7 56 56 A C - 0 0 8 -17,-0.3 2,-0.3 29,-0.2 29,-0.3 -0.644 9.5-150.6 -89.2 144.3 -4.2 -2.3 -2.2 57 57 A I E -C 84 0A 5 27,-1.5 27,-1.0 -2,-0.3 2,-0.3 -0.857 8.4-164.5-115.2 150.9 -5.6 1.2 -1.9 58 58 A V E +C 83 0A 30 -2,-0.3 25,-0.2 25,-0.2 -19,-0.1 -0.783 66.0 41.8-137.4 91.7 -4.0 4.5 -2.8 59 59 A G E S-C 82 0A 17 23,-3.1 23,-1.3 -2,-0.3 24,-0.1 -0.300 109.9 -48.5 177.8 -83.6 -5.7 7.6 -1.4 60 60 A R S S- 0 0 179 21,-0.2 -1,-0.1 24,-0.0 -3,-0.1 0.359 95.2 -47.8-141.0 -75.9 -7.0 7.7 2.2 61 61 A N S > S+ 0 0 117 -3,-0.1 3,-0.6 21,-0.1 22,-0.0 0.106 84.0 126.0-161.1 23.1 -9.2 4.9 3.5 62 62 A F T 3 + 0 0 115 1,-0.2 -4,-0.0 2,-0.1 0, 0.0 0.448 52.1 93.8 -71.9 2.5 -11.8 4.3 0.8 63 63 A G T 3 + 0 0 11 1,-0.1 -1,-0.2 2,-0.0 -2,-0.0 0.973 49.7 171.0 -57.8 -58.6 -10.7 0.6 0.8 64 64 A S < + 0 0 91 -3,-0.6 -2,-0.1 1,-0.1 -1,-0.1 0.914 53.6 89.3 44.7 54.0 -13.3 -0.6 3.3 65 65 A Y + 0 0 86 -10,-0.1 4,-0.1 3,-0.0 -1,-0.1 0.075 49.4 102.4-165.8 31.6 -12.4 -4.2 2.6 66 66 A V S >> S+ 0 0 9 2,-0.1 3,-1.1 3,-0.1 4,-1.1 0.952 95.2 19.9 -84.6 -72.8 -9.6 -5.1 5.0 67 67 A T T 34 S+ 0 0 97 1,-0.2 -1,-0.0 2,-0.2 5,-0.0 0.769 106.0 86.2 -69.6 -26.1 -11.2 -7.2 7.8 68 68 A H T 34 S+ 0 0 147 1,-0.2 -1,-0.2 20,-0.0 -2,-0.1 0.739 105.1 26.6 -46.6 -25.3 -14.1 -8.0 5.5 69 69 A E T <4 S- 0 0 38 -3,-1.1 -2,-0.2 -4,-0.1 20,-0.2 0.842 129.0 -62.1-103.9 -63.6 -12.0 -10.9 4.2 70 70 A T < - 0 0 20 -4,-1.1 18,-0.1 17,-0.2 -1,-0.1 -0.222 62.4 -74.3-150.9-116.7 -9.5 -12.0 6.9 71 71 A K S S+ 0 0 136 16,-0.2 2,-0.7 -2,-0.1 -4,-0.1 0.028 81.4 116.1-154.3 30.6 -6.7 -10.2 8.7 72 72 A H E + D 0 87A 82 15,-0.8 15,-1.5 -6,-0.3 2,-0.2 -0.575 45.7 125.6-105.9 68.1 -3.8 -10.0 6.2 73 73 A F E - D 0 86A 25 -2,-0.7 -61,-0.5 13,-0.3 -60,-0.4 -0.658 41.5-158.8-117.7 175.5 -3.5 -6.3 5.8 74 74 A I E -AD 11 85A 0 11,-1.6 11,-2.0 -2,-0.2 2,-0.3 -0.795 8.6-155.2-160.4 110.5 -0.7 -3.6 6.0 75 75 A Y E +AD 10 84A 64 -65,-2.0 -65,-0.6 -2,-0.2 2,-0.3 -0.704 20.7 161.3 -91.4 140.0 -1.2 0.1 6.6 76 76 A F E - D 0 83A 7 7,-2.0 7,-1.6 -2,-0.3 2,-0.4 -0.877 24.4-145.8-161.1 121.0 1.3 2.7 5.5 77 77 A Y E -AD 7 82A 111 -70,-3.3 -70,-1.5 -2,-0.3 5,-0.3 -0.719 13.0-158.6 -92.6 139.2 0.9 6.4 5.0 78 78 A L E > - D 0 81A 10 3,-2.7 3,-3.3 -2,-0.4 2,-0.6 -0.708 45.1 -66.0-111.5 163.0 2.7 8.4 2.3 79 79 A G T 3 S- 0 0 9 1,-0.3 3,-0.1 -2,-0.2 -1,-0.1 -0.280 122.0 -17.0 -51.8 100.1 3.5 12.1 2.1 80 80 A Q T 3 S+ 0 0 123 -2,-0.6 -1,-0.3 1,-0.2 2,-0.3 0.745 132.4 81.0 71.8 25.1 0.0 13.6 1.6 81 81 A V E < - D 0 78A 49 -3,-3.3 -3,-2.7 -21,-0.0 2,-0.4 -0.986 63.2-145.8-155.5 158.8 -1.3 10.1 0.7 82 82 A A E -CD 59 77A 12 -23,-1.3 -23,-3.1 -2,-0.3 2,-0.4 -0.982 12.0-174.7-132.4 143.1 -2.4 6.9 2.3 83 83 A I E -CD 58 76A 4 -7,-1.6 -7,-2.0 -2,-0.4 2,-0.4 -1.000 3.6-174.7-140.2 137.8 -2.1 3.3 1.1 84 84 A L E -CD 57 75A 8 -27,-1.0 -27,-1.5 -2,-0.4 2,-0.5 -0.942 5.2-165.8-138.1 115.7 -3.5 -0.0 2.5 85 85 A L E + D 0 74A 0 -11,-2.0 -11,-1.6 -2,-0.4 2,-0.3 -0.851 21.5 154.4-102.2 130.7 -2.7 -3.5 1.2 86 86 A F E - D 0 73A 1 -2,-0.5 -31,-1.4 -31,-0.4 2,-0.3 -0.986 17.7-169.5-151.7 157.7 -4.8 -6.4 2.3 87 87 A K E -BD 54 72A 33 -15,-1.5 -15,-0.8 -2,-0.3 -33,-0.3 -0.959 21.9-113.2-146.6 162.7 -5.8 -9.9 1.1 88 88 A S 0 0 34 -35,-2.0 -18,-0.1 -2,-0.3 -21,-0.0 -0.473 360.0 360.0 -94.1 167.8 -8.2 -12.7 1.9 89 89 A G 0 0 122 -20,-0.2 -1,-0.2 -2,-0.1 -19,-0.1 0.513 360.0 360.0-102.4 360.0 -7.5 -16.2 3.1