==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 02-JUL-03 1PWK . COMPND 2 MOLECULE: DYNEIN LIGHT CHAIN-2; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR W.WANG,K.W.-H.LO,H.-M.KAN,J.-S.FAN,M.ZHANG . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6396.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 54.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 20.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 249 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 109.6 8.8 18.3 13.1 2 2 A S + 0 0 85 0, 0.0 2,-1.4 0, 0.0 3,-0.1 -0.614 360.0 175.6-152.6 85.5 7.7 15.4 10.8 3 3 A D S S+ 0 0 164 1,-0.2 0, 0.0 -2,-0.2 0, 0.0 -0.421 71.3 63.4 -89.6 60.1 5.1 16.1 8.1 4 4 A R + 0 0 196 -2,-1.4 -1,-0.2 0, 0.0 77,-0.0 -0.155 52.9 165.9-179.6 70.7 5.3 12.6 6.6 5 5 A K + 0 0 106 -3,-0.1 75,-0.1 2,-0.0 -2,-0.1 0.976 6.7 162.9 -56.1 -86.5 4.3 9.7 8.8 6 6 A A + 0 0 61 1,-0.2 2,-0.3 77,-0.1 74,-0.3 0.994 23.8 152.1 59.8 77.0 3.9 6.7 6.5 7 7 A V E -A 79 0A 79 72,-1.7 72,-2.4 0, 0.0 2,-0.3 -0.939 44.9-112.0-136.8 159.3 4.0 3.8 8.9 8 8 A I E -A 78 0A 76 -2,-0.3 70,-0.2 70,-0.3 3,-0.1 -0.712 19.4-168.6 -92.7 140.7 2.6 0.3 9.2 9 9 A K E - 0 0 114 68,-2.1 2,-0.3 1,-0.3 69,-0.2 0.931 58.0 -37.5 -89.4 -69.6 -0.1 -0.6 11.7 10 10 A N E -A 77 0A 61 67,-1.1 67,-2.9 2,-0.0 -1,-0.3 -0.972 45.1-163.1-154.8 165.1 -0.3 -4.4 11.8 11 11 A A E -A 76 0A 28 -2,-0.3 65,-0.3 65,-0.3 7,-0.0 -0.834 12.1-175.4-160.5 118.0 -0.2 -7.5 9.6 12 12 A D + 0 0 107 63,-3.0 2,-0.2 -2,-0.3 64,-0.2 -0.251 55.0 113.8-105.9 43.1 -1.4 -11.1 10.2 13 13 A M S S- 0 0 27 61,-0.2 -2,-0.1 62,-0.1 61,-0.0 -0.471 85.0 -95.8-104.8 178.4 -0.1 -12.4 6.9 14 14 A S - 0 0 92 -2,-0.2 -1,-0.1 1,-0.1 -3,-0.0 0.945 60.6-113.0 -58.9 -48.8 2.7 -14.9 6.1 15 15 A E S > S+ 0 0 100 -3,-0.0 4,-1.6 0, 0.0 5,-0.2 -0.160 102.1 85.8 141.5 -37.5 5.2 -12.0 5.6 16 16 A D H > S+ 0 0 88 1,-0.2 4,-1.6 2,-0.2 5,-0.0 0.696 96.5 48.6 -64.2 -15.9 6.0 -12.2 1.9 17 17 A M H > S+ 0 0 22 2,-0.2 4,-2.8 3,-0.2 5,-0.3 0.872 105.4 51.9 -91.0 -42.5 2.9 -10.0 1.4 18 18 A Q H > S+ 0 0 61 2,-0.2 4,-1.4 1,-0.2 -2,-0.2 0.772 117.0 45.6 -64.3 -19.6 3.6 -7.4 4.0 19 19 A Q H X S+ 0 0 95 -4,-1.6 4,-1.6 2,-0.2 -2,-0.2 0.914 116.3 40.6 -85.7 -49.0 6.9 -7.2 2.2 20 20 A D H X S+ 0 0 49 -4,-1.6 4,-2.9 1,-0.2 -2,-0.2 0.721 117.3 53.9 -70.7 -19.5 5.5 -7.1 -1.3 21 21 A A H X S+ 0 0 0 -4,-2.8 4,-1.9 2,-0.2 -2,-0.2 0.923 105.6 48.8 -79.5 -47.4 2.9 -4.8 0.0 22 22 A V H X S+ 0 0 46 -4,-1.4 4,-1.5 -5,-0.3 -2,-0.2 0.835 120.0 41.7 -61.1 -30.1 5.3 -2.3 1.5 23 23 A D H X S+ 0 0 85 -4,-1.6 4,-3.6 2,-0.2 5,-0.5 0.952 114.5 46.5 -81.6 -53.7 7.1 -2.4 -1.8 24 24 A C H X S+ 0 0 26 -4,-2.9 4,-0.9 1,-0.3 -2,-0.2 0.746 116.6 51.0 -59.5 -17.5 4.0 -2.4 -4.0 25 25 A A H X S+ 0 0 13 -4,-1.9 4,-1.5 2,-0.2 -1,-0.3 0.853 111.9 43.7 -85.2 -38.4 3.0 0.4 -1.6 26 26 A T H X S+ 0 0 62 -4,-1.5 4,-1.3 2,-0.2 -2,-0.2 0.926 120.6 40.6 -71.6 -45.0 6.2 2.3 -2.0 27 27 A Q H X S+ 0 0 93 -4,-3.6 4,-3.8 2,-0.2 5,-0.5 0.860 112.5 56.5 -71.1 -34.9 6.3 1.8 -5.8 28 28 A A H X S+ 0 0 0 -4,-0.9 4,-2.0 -5,-0.5 -1,-0.2 0.866 111.4 43.1 -64.1 -34.9 2.5 2.4 -5.9 29 29 A M H < S+ 0 0 68 -4,-1.5 -1,-0.2 2,-0.2 -2,-0.2 0.727 118.2 45.6 -82.0 -22.5 3.1 5.8 -4.2 30 30 A E H < S+ 0 0 132 -4,-1.3 -2,-0.2 -5,-0.1 -3,-0.2 0.844 123.7 33.4 -86.3 -37.6 6.1 6.5 -6.4 31 31 A K H < S+ 0 0 144 -4,-3.8 2,-0.4 1,-0.2 -3,-0.2 0.840 131.1 33.4 -84.4 -36.5 4.4 5.5 -9.7 32 32 A Y < - 0 0 78 -4,-2.0 -1,-0.2 -5,-0.5 9,-0.0 -0.973 53.6-177.7-124.6 134.8 1.0 6.7 -8.6 33 33 A N + 0 0 128 -2,-0.4 -4,-0.1 -3,-0.1 -1,-0.1 0.229 61.5 89.3-112.0 10.6 0.3 9.7 -6.3 34 34 A I S S- 0 0 77 1,-0.1 -2,-0.1 0, 0.0 0, 0.0 -0.022 74.4-129.3 -90.3-161.0 -3.5 9.2 -6.3 35 35 A E S > S+ 0 0 88 3,-0.1 4,-0.8 2,-0.1 23,-0.1 0.591 103.8 45.0-123.3 -30.2 -5.6 7.1 -3.9 36 36 A K H > S+ 0 0 162 2,-0.2 4,-0.7 3,-0.1 22,-0.0 0.654 115.3 48.9 -89.8 -18.0 -7.8 5.1 -6.2 37 37 A D H > S+ 0 0 46 2,-0.2 4,-2.0 3,-0.2 5,-0.2 0.757 107.7 53.7 -90.5 -27.3 -4.8 4.2 -8.4 38 38 A I H > S+ 0 0 0 2,-0.2 4,-1.4 1,-0.2 -2,-0.2 0.864 115.9 40.2 -71.9 -34.9 -2.6 3.2 -5.4 39 39 A A H X S+ 0 0 15 -4,-0.8 4,-1.2 2,-0.2 -2,-0.2 0.765 119.8 45.6 -82.3 -27.4 -5.4 0.8 -4.4 40 40 A A H X S+ 0 0 42 -4,-0.7 4,-1.0 2,-0.2 -2,-0.2 0.707 115.1 47.6 -86.5 -22.6 -6.0 -0.1 -8.0 41 41 A Y H X S+ 0 0 58 -4,-2.0 4,-1.1 2,-0.2 -2,-0.2 0.775 118.7 39.3 -87.5 -29.1 -2.3 -0.6 -8.7 42 42 A I H X S+ 0 0 0 -4,-1.4 4,-1.1 2,-0.2 -2,-0.2 0.765 120.1 46.1 -88.7 -28.7 -1.8 -2.6 -5.5 43 43 A K H X S+ 0 0 88 -4,-1.2 4,-1.8 13,-0.3 11,-0.4 0.825 119.0 41.6 -80.8 -33.2 -5.0 -4.5 -6.0 44 44 A K H X S+ 0 0 115 -4,-1.0 4,-1.5 2,-0.2 -2,-0.2 0.824 116.6 48.3 -82.0 -32.8 -4.3 -5.1 -9.7 45 45 A E H < S+ 0 0 52 -4,-1.1 -2,-0.2 2,-0.2 -3,-0.2 0.783 114.6 47.7 -76.6 -26.7 -0.6 -5.9 -9.0 46 46 A F H >X S+ 0 0 0 -4,-1.1 3,-0.8 2,-0.2 4,-0.6 0.926 116.2 39.4 -79.3 -48.6 -1.6 -8.3 -6.2 47 47 A D H 3X S+ 0 0 34 -4,-1.8 4,-0.8 1,-0.2 3,-0.3 0.838 116.3 52.6 -70.7 -32.5 -4.4 -10.2 -8.0 48 48 A K H 3< S+ 0 0 130 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.470 127.5 21.9 -81.7 -1.6 -2.3 -10.2 -11.3 49 49 A K H <4 S+ 0 0 141 -3,-0.8 -2,-0.2 -4,-0.1 -1,-0.2 0.177 130.2 39.5-150.3 20.2 0.7 -11.6 -9.4 50 50 A Y H < S- 0 0 56 -4,-0.6 -3,-0.2 -3,-0.3 -2,-0.1 0.258 114.4 -89.2-152.5 7.8 -0.7 -13.3 -6.3 51 51 A N S < S- 0 0 120 -4,-0.8 -3,-0.2 -5,-0.1 -2,-0.1 0.655 71.4 -38.5 81.0 121.0 -3.9 -15.0 -7.5 52 52 A P S S+ 0 0 94 0, 0.0 37,-0.1 0, 0.0 -8,-0.0 -0.251 101.3 30.6 -54.8 134.3 -7.3 -13.2 -7.4 53 53 A T + 0 0 61 35,-0.1 37,-0.5 -10,-0.1 38,-0.2 0.525 42.4 156.6-148.0 153.3 -8.1 -11.4 -5.4 54 54 A W B -D 89 0B 18 -11,-0.4 35,-0.3 35,-0.2 -7,-0.1 -0.626 31.8-138.1-102.0 160.0 -6.7 -9.0 -2.8 55 55 A H + 0 0 59 33,-3.1 2,-1.3 -2,-0.2 31,-0.2 -0.259 30.7 168.8-112.1 46.0 -8.5 -6.1 -1.1 56 56 A C + 0 0 2 32,-0.2 -13,-0.3 -17,-0.1 31,-0.3 -0.401 20.6 164.9 -60.1 91.7 -5.7 -3.4 -1.3 57 57 A I E -B 86 0A 80 29,-2.7 29,-2.8 -2,-1.3 2,-0.3 -0.756 25.9-148.4-113.4 161.3 -7.9 -0.4 -0.2 58 58 A V E +B 85 0A 26 -2,-0.3 27,-0.2 27,-0.3 2,-0.2 -0.919 26.0 141.9-127.1 153.1 -7.0 3.1 1.0 59 59 A G E -B 84 0A 17 25,-0.9 25,-2.3 -2,-0.3 2,-0.1 -0.855 45.0-109.3-162.7-162.4 -8.7 5.5 3.4 60 60 A R S S- 0 0 183 23,-0.3 23,-0.2 -2,-0.2 19,-0.0 -0.541 77.7 -61.1-151.7 77.6 -8.4 8.1 6.1 61 61 A S S S+ 0 0 102 -2,-0.1 22,-0.1 1,-0.1 -2,-0.0 0.875 94.7 135.0 47.0 43.5 -9.5 6.9 9.6 62 62 A G S S- 0 0 59 22,-0.1 -1,-0.1 1,-0.0 -3,-0.0 0.962 78.6 -49.9 -82.9 -74.3 -13.0 6.4 8.2 63 63 A N > + 0 0 112 4,-0.0 3,-0.8 5,-0.0 2,-0.4 -0.170 69.4 149.4-166.6 58.0 -14.3 3.0 9.4 64 64 A F T 3 + 0 0 53 1,-0.2 -3,-0.0 2,-0.1 -5,-0.0 -0.186 68.1 66.3 -90.0 42.1 -11.8 0.2 8.8 65 65 A G T 3 S+ 0 0 74 -2,-0.4 -1,-0.2 2,-0.0 0, 0.0 0.217 100.8 38.8-144.9 14.8 -13.1 -1.7 11.9 66 66 A S S < S+ 0 0 107 -3,-0.8 -2,-0.1 3,-0.0 0, 0.0 0.046 120.4 34.7-155.2 29.3 -16.6 -2.8 11.0 67 67 A Y S S+ 0 0 165 2,-0.0 -3,-0.1 0, 0.0 -4,-0.0 0.182 95.9 76.2-173.1 25.4 -16.5 -3.7 7.3 68 68 A V S S+ 0 0 27 -4,-0.0 4,-0.1 0, 0.0 -4,-0.1 0.299 74.1 82.7-124.9 3.0 -13.1 -5.3 6.6 69 69 A T > + 0 0 101 2,-0.1 3,-1.8 1,-0.1 4,-0.1 0.995 36.3 148.5 -70.7 -74.0 -13.8 -8.7 8.2 70 70 A H T 3 S- 0 0 99 1,-0.3 -1,-0.1 2,-0.1 0, 0.0 0.724 96.2 -68.7 43.3 23.1 -15.6 -10.6 5.5 71 71 A E T 3 S+ 0 0 143 1,-0.0 -1,-0.3 2,-0.0 -2,-0.1 0.954 77.9 172.0 63.1 49.7 -13.8 -13.6 7.0 72 72 A T < - 0 0 5 -3,-1.8 19,-0.1 -4,-0.1 17,-0.1 0.944 14.9-167.6 -54.5 -55.3 -10.4 -12.4 5.8 73 73 A K S S+ 0 0 168 17,-0.1 2,-0.2 -4,-0.1 -1,-0.1 0.510 72.0 24.2 75.2 5.2 -8.4 -15.1 7.8 74 74 A H S S+ 0 0 65 15,-0.1 15,-1.1 -61,-0.0 2,-0.3 -0.615 74.2 140.1 166.7 130.7 -5.3 -13.1 7.0 75 75 A F E - C 0 88A 65 -2,-0.2 -63,-3.0 13,-0.2 2,-0.3 -0.991 31.6-128.4-170.1 172.7 -4.5 -9.4 6.2 76 76 A I E -AC 11 87A 4 11,-3.3 11,-1.4 -2,-0.3 2,-0.4 -0.920 11.4-155.7-134.5 157.7 -2.3 -6.4 6.5 77 77 A Y E -AC 10 86A 30 -67,-2.9 -68,-2.1 -2,-0.3 -67,-1.1 -0.965 8.8-169.9-141.2 122.1 -2.8 -2.7 7.4 78 78 A F E -AC 8 85A 11 7,-2.7 7,-1.2 -2,-0.4 2,-0.4 -0.622 8.1-149.8-105.5 167.2 -0.7 0.3 6.5 79 79 A Y E +AC 7 84A 65 -72,-2.4 -72,-1.7 5,-0.2 5,-0.2 -0.997 13.0 179.0-138.4 139.1 -0.8 3.9 7.7 80 80 A L E > - C 0 83A 44 3,-2.4 3,-0.9 -2,-0.4 4,-0.1 -0.561 63.5 -71.9-143.1 74.9 0.2 7.0 5.9 81 81 A G T 3 S- 0 0 21 1,-0.3 3,-0.1 -2,-0.1 -2,-0.0 0.876 121.2 -8.9 35.1 90.2 -0.3 10.2 7.9 82 82 A Q T 3 S+ 0 0 152 1,-0.3 2,-0.3 -21,-0.0 -1,-0.3 0.183 123.7 96.0 82.5 -16.4 -4.1 10.6 8.0 83 83 A V E < - C 0 80A 21 -3,-0.9 -3,-2.4 -23,-0.2 2,-0.4 -0.735 56.6-160.5-105.8 155.5 -4.4 7.8 5.4 84 84 A A E -BC 59 79A 1 -25,-2.3 -25,-0.9 -2,-0.3 2,-0.4 -0.945 2.4-165.6-140.7 117.7 -5.1 4.1 6.1 85 85 A I E -BC 58 78A 2 -7,-1.2 -7,-2.7 -2,-0.4 2,-0.4 -0.813 1.9-167.5-104.0 141.4 -4.4 1.2 3.6 86 86 A L E -BC 57 77A 6 -29,-2.8 -29,-2.7 -2,-0.4 2,-0.4 -0.928 5.5-178.6-133.6 111.4 -5.8 -2.3 4.0 87 87 A L E + C 0 76A 2 -11,-1.4 -11,-3.3 -2,-0.4 2,-0.3 -0.845 22.9 122.8-108.1 143.0 -4.5 -5.2 2.0 88 88 A F E - C 0 75A 6 -2,-0.4 -33,-3.1 -13,-0.2 2,-0.4 -0.982 52.3-106.9-178.0 177.5 -5.9 -8.7 2.3 89 89 A K B -D 54 0B 35 -15,-1.1 -35,-0.2 -2,-0.3 -15,-0.1 -0.941 16.1-175.0-130.4 109.1 -7.5 -11.7 0.6 90 90 A S 0 0 35 -37,-0.5 -36,-0.1 -2,-0.4 -17,-0.1 0.003 360.0 360.0 -90.4 29.1 -11.2 -12.5 1.2 91 91 A G 0 0 117 -38,-0.2 -38,-0.1 -19,-0.1 -2,-0.1 -0.129 360.0 360.0 -73.0 360.0 -10.9 -15.7 -0.8