==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN/RNA 14-MAY-07 2PXB . COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4712.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 76.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 17.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 53.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 96 0, 0.0 2,-0.2 0, 0.0 66,-0.0 0.000 360.0 360.0 360.0 112.9 221.0 22.4 36.5 2 2 A D >> - 0 0 37 28,-0.1 4,-2.3 29,-0.0 3,-0.6 -0.609 360.0 -80.3-125.6-173.9 222.4 18.8 36.9 3 3 A L H 3> S+ 0 0 0 25,-1.9 4,-1.6 1,-0.2 26,-0.1 0.734 123.3 63.1 -62.2 -23.6 221.1 15.2 36.7 4 4 A N H 3> S+ 0 0 37 24,-0.6 4,-1.3 2,-0.2 -1,-0.2 0.921 108.4 41.6 -67.3 -41.9 219.7 15.5 40.2 5 5 A D H X> S+ 0 0 64 -3,-0.6 4,-1.2 2,-0.2 3,-1.1 0.976 110.0 55.5 -66.7 -56.8 217.3 18.2 39.0 6 6 A F H 3< S+ 0 0 20 -4,-2.3 -1,-0.2 1,-0.3 3,-0.2 0.828 105.0 57.3 -44.4 -35.0 216.5 16.4 35.8 7 7 A L H 3< S+ 0 0 41 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.916 92.3 65.7 -64.7 -44.1 215.6 13.5 38.0 8 8 A E H << 0 0 154 -4,-1.3 -1,-0.2 -3,-1.1 -2,-0.2 0.899 360.0 360.0 -42.4 -46.3 213.0 15.7 39.9 9 9 A Q < 0 0 139 -4,-1.2 -2,-0.2 -3,-0.2 -3,-0.1 0.915 360.0 360.0 -75.6 360.0 211.2 15.7 36.6 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 23 A K 0 0 145 0, 0.0 3,-0.4 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0-104.0 205.1 5.5 31.8 12 24 A V >> + 0 0 70 1,-0.2 3,-0.8 2,-0.1 4,-0.7 0.205 360.0 97.7 -98.2 10.8 208.7 4.8 30.8 13 25 A L H 3> S+ 0 0 57 1,-0.2 4,-1.8 2,-0.2 3,-0.3 0.762 74.9 64.5 -69.1 -23.6 209.9 7.5 33.2 14 26 A V H 3> S+ 0 0 68 -3,-0.4 4,-1.6 1,-0.2 -1,-0.2 0.784 98.2 53.4 -69.6 -26.9 210.5 4.7 35.7 15 27 A R H <> S+ 0 0 47 -3,-0.8 4,-1.0 2,-0.2 -1,-0.2 0.715 107.5 50.7 -81.1 -21.1 213.2 3.3 33.4 16 28 A X H X S+ 0 0 53 -4,-0.7 4,-2.2 -3,-0.3 5,-0.2 0.840 106.4 53.6 -83.0 -35.6 215.0 6.7 33.3 17 29 A E H X S+ 0 0 101 -4,-1.8 4,-3.4 1,-0.2 5,-0.2 0.974 105.0 56.4 -59.0 -52.7 215.0 7.0 37.0 18 30 A A H < S+ 0 0 34 -4,-1.6 4,-0.4 1,-0.2 -1,-0.2 0.861 107.2 48.6 -45.0 -47.1 216.7 3.6 37.2 19 31 A I H >< S+ 0 0 5 -4,-1.0 3,-1.8 1,-0.2 4,-0.2 0.961 114.2 43.4 -62.1 -52.9 219.5 4.8 35.0 20 32 A I H >< S+ 0 0 2 -4,-2.2 3,-1.5 1,-0.3 -2,-0.2 0.867 109.0 62.1 -61.8 -31.4 220.1 8.0 36.9 21 33 A N T 3< S+ 0 0 86 -4,-3.4 -1,-0.3 1,-0.3 -2,-0.2 0.572 96.0 58.8 -70.7 -8.5 219.8 5.8 40.1 22 34 A S T < S+ 0 0 30 -3,-1.8 -1,-0.3 -4,-0.4 -2,-0.2 0.404 91.1 94.7 -98.6 2.3 222.8 3.7 39.0 23 35 A X S < S- 0 0 9 -3,-1.5 2,-0.2 -4,-0.2 3,-0.0 -0.455 75.1-119.2 -90.9 163.2 225.0 6.7 39.0 24 36 A T > - 0 0 61 -2,-0.1 4,-1.7 1,-0.1 5,-0.2 -0.466 34.4-102.7 -91.3 171.5 227.3 8.0 41.7 25 37 A X H >> S+ 0 0 114 1,-0.2 4,-1.9 2,-0.2 3,-0.7 0.974 121.4 52.3 -59.8 -54.1 226.8 11.5 43.2 26 38 A K H 3> S+ 0 0 161 1,-0.3 4,-3.1 2,-0.2 -1,-0.2 0.862 107.3 52.3 -49.5 -43.7 229.7 13.0 41.3 27 39 A E H 34 S+ 0 0 0 1,-0.2 -1,-0.3 2,-0.2 -2,-0.2 0.867 109.6 49.3 -62.9 -36.5 228.3 11.6 38.0 28 40 A R H << S+ 0 0 48 -4,-1.7 -25,-1.9 -3,-0.7 -24,-0.6 0.822 117.2 41.8 -71.4 -29.8 225.0 13.2 38.7 29 41 A A H < S+ 0 0 45 -4,-1.9 -2,-0.2 1,-0.2 -3,-0.2 0.864 127.8 26.3 -84.5 -40.9 226.7 16.6 39.5 30 42 A K S >< S+ 0 0 111 -4,-3.1 3,-2.6 -5,-0.2 4,-0.2 -0.562 72.4 178.5-124.6 64.0 229.3 16.8 36.8 31 43 A P G > + 0 0 20 0, 0.0 3,-1.9 0, 0.0 -1,-0.1 0.664 69.6 73.9 -37.9 -31.6 227.7 14.6 34.0 32 44 A E G 3 S+ 0 0 109 1,-0.3 -5,-0.1 -3,-0.1 -2,-0.0 0.719 81.0 69.5 -64.3 -20.5 230.5 15.2 31.6 33 45 A I G < S+ 0 0 46 -3,-2.6 2,-1.2 -7,-0.2 -1,-0.3 0.662 75.7 105.4 -70.4 -12.5 232.8 12.9 33.5 34 46 A I < + 0 0 8 -3,-1.9 2,-0.1 -4,-0.2 -1,-0.1 -0.543 46.5 150.1 -76.8 95.8 230.6 10.1 32.2 35 47 A K > - 0 0 139 -2,-1.2 4,-2.3 4,-0.0 5,-0.2 -0.227 59.3 -59.4-107.0-161.6 232.5 8.3 29.5 36 48 A G H > S+ 0 0 51 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.898 126.6 46.0 -48.3 -62.3 232.5 4.7 28.2 37 49 A S H > S+ 0 0 74 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.845 115.4 47.6 -55.5 -39.5 233.5 2.7 31.2 38 50 A R H > S+ 0 0 97 2,-0.2 4,-2.9 -3,-0.2 -1,-0.2 0.880 110.8 50.6 -71.5 -39.3 231.1 4.5 33.5 39 51 A K H X S+ 0 0 42 -4,-2.3 4,-3.0 2,-0.2 5,-0.4 0.962 107.6 55.2 -61.0 -47.9 228.2 4.1 31.0 40 52 A R H X S+ 0 0 151 -4,-3.0 4,-2.0 1,-0.2 5,-0.2 0.932 112.1 43.4 -47.8 -50.2 229.1 0.4 30.8 41 53 A R H X S+ 0 0 93 -4,-1.9 4,-2.3 2,-0.2 -1,-0.2 0.921 115.3 47.0 -63.1 -48.0 228.7 0.3 34.6 42 54 A I H X S+ 0 0 0 -4,-2.9 4,-1.3 2,-0.2 6,-0.2 0.945 111.7 49.3 -60.1 -54.5 225.5 2.4 34.8 43 55 A A H ><>S+ 0 0 4 -4,-3.0 5,-3.4 1,-0.2 3,-0.8 0.938 116.1 42.2 -53.6 -52.1 223.7 0.5 32.0 44 56 A A H ><5S+ 0 0 80 -4,-2.0 3,-1.4 -5,-0.4 -1,-0.2 0.882 111.0 58.2 -64.1 -35.2 224.4 -2.9 33.4 45 57 A G H 3<5S+ 0 0 54 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.715 112.4 39.5 -67.6 -21.0 223.6 -1.6 36.9 46 58 A S T <<5S- 0 0 18 -4,-1.3 -1,-0.3 -3,-0.8 -2,-0.2 -0.094 115.4-109.1-117.7 32.1 220.1 -0.6 35.8 47 59 A G T < 5S+ 0 0 67 -3,-1.4 -3,-0.2 1,-0.1 -4,-0.1 0.805 86.7 112.0 44.1 35.5 219.5 -3.7 33.6 48 60 A X < - 0 0 62 -5,-3.4 2,-0.3 -6,-0.2 -1,-0.1 -0.199 65.4-109.8-114.0-155.6 219.7 -1.3 30.6 49 61 A Q >> - 0 0 113 -2,-0.1 4,-2.0 -3,-0.1 3,-1.7 -0.990 27.9-109.0-145.5 149.2 222.1 -0.8 27.7 50 62 A V H 3> S+ 0 0 58 -2,-0.3 4,-3.3 1,-0.3 5,-0.2 0.836 119.3 57.5 -47.2 -40.2 224.6 1.9 26.9 51 63 A Q H 3> S+ 0 0 137 1,-0.2 4,-1.9 2,-0.2 -1,-0.3 0.871 106.8 50.4 -60.1 -34.6 222.4 3.1 24.0 52 64 A D H <> S+ 0 0 62 -3,-1.7 4,-2.5 2,-0.2 -2,-0.2 0.962 111.6 47.4 -64.6 -52.4 219.7 3.6 26.6 53 65 A V H X S+ 0 0 0 -4,-2.0 4,-3.3 1,-0.2 5,-0.2 0.919 110.6 51.1 -54.7 -49.5 222.1 5.5 28.8 54 66 A N H X S+ 0 0 60 -4,-3.3 4,-2.3 2,-0.2 -1,-0.2 0.884 108.8 52.2 -57.4 -40.0 223.3 7.7 25.9 55 67 A R H X S+ 0 0 49 -4,-1.9 4,-2.5 -5,-0.2 -1,-0.2 0.959 111.7 45.7 -60.7 -50.0 219.7 8.4 25.1 56 68 A L H X S+ 0 0 2 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.922 112.6 50.5 -57.8 -46.8 219.0 9.5 28.7 57 69 A L H X S+ 0 0 26 -4,-3.3 4,-2.0 1,-0.2 -1,-0.2 0.849 110.9 50.6 -60.2 -35.0 222.3 11.6 28.7 58 70 A K H X S+ 0 0 107 -4,-2.3 4,-2.4 -5,-0.2 -2,-0.2 0.889 108.7 50.1 -70.8 -41.2 221.1 13.2 25.4 59 71 A Q H X S+ 0 0 96 -4,-2.5 4,-1.5 2,-0.2 -2,-0.2 0.918 111.6 48.4 -64.2 -42.5 217.7 14.1 26.8 60 72 A F H X S+ 0 0 20 -4,-2.5 4,-2.1 2,-0.2 -1,-0.2 0.926 109.2 55.3 -60.7 -45.2 219.3 15.6 29.8 61 73 A D H X S+ 0 0 52 -4,-2.0 4,-3.0 1,-0.2 3,-0.4 0.939 107.8 45.9 -53.0 -54.9 221.7 17.5 27.6 62 74 A D H X S+ 0 0 65 -4,-2.4 4,-1.9 1,-0.3 -1,-0.2 0.809 111.7 54.2 -60.1 -29.7 218.9 19.1 25.5 63 75 A X H X S+ 0 0 48 -4,-1.5 4,-1.0 -5,-0.2 -1,-0.3 0.842 113.2 42.8 -71.3 -34.8 217.2 19.9 28.8 64 76 A Q H >X S+ 0 0 22 -4,-2.1 4,-3.0 -3,-0.4 3,-1.3 0.985 114.1 47.4 -73.2 -64.0 220.4 21.7 29.9 65 77 A R H 3< S+ 0 0 156 -4,-3.0 -2,-0.2 1,-0.3 -3,-0.2 0.861 109.9 56.4 -43.8 -44.1 221.2 23.5 26.7 66 78 A X H 3< S+ 0 0 107 -4,-1.9 3,-0.4 -5,-0.3 -1,-0.3 0.865 116.0 34.8 -59.4 -39.0 217.6 24.6 26.6 67 79 A X H << S+ 0 0 101 -3,-1.3 3,-0.5 -4,-1.0 -1,-0.2 0.694 104.8 70.7 -87.9 -22.1 217.9 26.2 30.0 68 80 A K S < S+ 0 0 85 -4,-3.0 -1,-0.2 1,-0.3 -2,-0.2 0.067 97.4 59.6 -80.5 25.5 221.5 27.2 29.4 69 81 A K 0 0 171 -3,-0.4 -1,-0.3 -5,-0.2 -4,-0.0 -0.395 360.0 360.0-149.6 58.2 219.7 29.7 27.0 70 82 A X 0 0 225 -3,-0.5 -2,-0.1 0, 0.0 -3,-0.1 -0.034 360.0 360.0-174.4 360.0 217.5 31.7 29.3