==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN/RNA 14-MAY-07 2PXU . COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.Y.KEEL,R.P.RAMBO,R.T.BATEY,J.S.KIEFT . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4758.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 72.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 15.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 50.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 94 0, 0.0 2,-0.1 0, 0.0 66,-0.1 0.000 360.0 360.0 360.0 105.7 86.5 -33.3 84.8 2 2 A D > - 0 0 38 28,-0.0 4,-2.1 29,-0.0 3,-0.4 -0.397 360.0 -88.4-111.7-172.4 87.7 -36.9 85.3 3 3 A L H > S+ 0 0 0 25,-2.2 4,-1.3 1,-0.2 26,-0.1 0.660 120.0 67.4 -71.7 -19.1 86.4 -40.5 85.1 4 4 A N H > S+ 0 0 47 24,-0.6 4,-1.1 2,-0.2 -1,-0.2 0.913 108.5 41.9 -65.2 -37.7 85.1 -40.3 88.7 5 5 A D H >> S+ 0 0 66 -3,-0.4 3,-1.1 2,-0.2 4,-1.0 0.975 106.7 57.1 -69.2 -60.6 82.7 -37.8 87.2 6 6 A F H 3< S+ 0 0 13 -4,-2.1 3,-0.3 1,-0.3 -1,-0.2 0.782 105.3 57.4 -43.4 -29.2 81.9 -39.6 84.0 7 7 A L H 3< S+ 0 0 48 -4,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.925 95.5 60.1 -69.6 -45.8 80.8 -42.4 86.3 8 8 A E H << 0 0 177 -4,-1.1 -1,-0.2 -3,-1.1 -2,-0.2 0.732 360.0 360.0 -54.0 -22.8 78.3 -40.3 88.1 9 9 A Q < 0 0 134 -4,-1.0 -1,-0.1 -3,-0.3 -4,-0.0 -0.771 360.0 360.0 -92.3 360.0 76.6 -39.9 84.7 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 23 A K 0 0 131 0, 0.0 4,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -31.1 72.8 -53.5 80.0 12 24 A V + 0 0 77 2,-0.1 4,-0.1 3,-0.1 0, 0.0 0.467 360.0 48.8-102.9 -8.1 75.3 -51.2 78.3 13 25 A L S > S+ 0 0 61 2,-0.2 4,-1.0 3,-0.1 3,-0.4 0.804 107.3 51.7 -96.5 -41.7 75.4 -48.8 81.3 14 26 A V H > S+ 0 0 63 1,-0.3 4,-1.8 2,-0.2 3,-0.1 0.827 112.0 50.0 -63.7 -30.4 75.9 -51.5 84.0 15 27 A R H > S+ 0 0 31 -4,-0.2 4,-1.3 2,-0.2 -1,-0.3 0.702 104.3 57.8 -80.5 -20.7 78.8 -52.7 81.8 16 28 A X H > S+ 0 0 47 -3,-0.4 4,-0.9 2,-0.2 -2,-0.2 0.668 110.5 43.5 -81.5 -17.5 80.2 -49.1 81.6 17 29 A E H X S+ 0 0 97 -4,-1.0 4,-3.7 2,-0.2 5,-0.2 0.834 105.2 63.2 -89.6 -41.1 80.4 -49.0 85.3 18 30 A A H < S+ 0 0 34 -4,-1.8 4,-0.4 1,-0.2 -2,-0.2 0.889 106.2 46.2 -47.0 -47.2 81.9 -52.5 85.5 19 31 A I H >< S+ 0 0 6 -4,-1.3 3,-2.1 2,-0.2 4,-0.4 0.963 114.1 43.3 -64.2 -57.3 84.9 -51.2 83.5 20 32 A I H >< S+ 0 0 3 -4,-0.9 3,-2.4 1,-0.3 -2,-0.2 0.917 109.0 62.2 -57.2 -39.1 85.5 -48.0 85.5 21 33 A N T 3< S+ 0 0 94 -4,-3.7 -1,-0.3 1,-0.3 -2,-0.2 0.694 100.1 54.2 -58.9 -18.3 84.9 -50.2 88.6 22 34 A S T < S+ 0 0 32 -3,-2.1 -1,-0.3 -4,-0.4 -2,-0.2 0.465 95.7 87.9 -94.9 -1.4 88.0 -52.2 87.5 23 35 A X S < S- 0 0 10 -3,-2.4 2,-0.2 -4,-0.4 -3,-0.0 -0.415 76.9-117.1 -91.9 170.6 90.2 -49.2 87.4 24 36 A T > - 0 0 61 -2,-0.1 4,-1.7 1,-0.1 3,-0.2 -0.563 32.0-102.4 -99.8 167.3 92.3 -47.6 90.2 25 37 A X H > S+ 0 0 126 1,-0.2 4,-1.5 2,-0.2 3,-0.3 0.930 122.9 52.3 -57.0 -42.8 91.9 -44.1 91.6 26 38 A K H > S+ 0 0 162 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.856 107.1 51.8 -61.2 -37.3 94.9 -42.9 89.6 27 39 A E H 4 S+ 0 0 0 -3,-0.2 -1,-0.2 1,-0.2 -2,-0.2 0.815 110.8 48.3 -69.3 -29.9 93.5 -44.3 86.3 28 40 A R H < S+ 0 0 40 -4,-1.7 -25,-2.2 -3,-0.3 -24,-0.6 0.740 113.6 48.3 -80.2 -23.6 90.2 -42.5 86.9 29 41 A A H < S+ 0 0 57 -4,-1.5 -2,-0.2 -5,-0.2 -1,-0.2 0.700 128.3 20.6 -88.4 -21.0 92.2 -39.3 87.7 30 42 A K >< + 0 0 110 -4,-1.5 3,-3.5 -5,-0.2 4,-0.3 -0.318 63.9 176.1-145.5 58.8 94.4 -39.5 84.6 31 43 A P G > S+ 0 0 19 0, 0.0 3,-2.3 0, 0.0 -1,-0.1 0.735 77.1 71.2 -33.7 -36.6 92.8 -41.7 81.9 32 44 A E G 3 S+ 0 0 114 1,-0.3 -5,-0.1 3,-0.0 -2,-0.0 0.785 85.8 66.0 -56.9 -28.5 95.7 -40.8 79.6 33 45 A I G < S+ 0 0 41 -3,-3.5 2,-1.0 -7,-0.2 -1,-0.3 0.575 79.1 101.3 -69.3 -9.9 98.1 -43.0 81.7 34 46 A I < + 0 0 10 -3,-2.3 2,-0.1 -4,-0.3 -1,-0.1 -0.664 46.4 156.4 -84.9 99.6 96.1 -46.0 80.6 35 47 A K > - 0 0 139 -2,-1.0 4,-2.5 4,-0.0 5,-0.2 -0.166 59.1 -61.2-102.5-159.5 98.0 -47.9 77.9 36 48 A G H > S+ 0 0 40 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.924 126.7 52.2 -52.3 -57.6 97.9 -51.6 76.8 37 49 A S H > S+ 0 0 85 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.903 114.8 41.6 -49.4 -51.0 99.0 -53.3 80.0 38 50 A R H > S+ 0 0 95 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.926 110.4 57.7 -65.3 -44.6 96.4 -51.6 82.2 39 51 A K H X S+ 0 0 42 -4,-2.5 4,-2.7 1,-0.2 -2,-0.2 0.963 107.0 50.1 -48.0 -55.3 93.7 -51.9 79.5 40 52 A R H X S+ 0 0 159 -4,-2.9 4,-1.8 1,-0.2 5,-0.4 0.903 108.5 51.2 -49.3 -49.3 94.3 -55.7 79.7 41 53 A R H X S+ 0 0 104 -4,-2.0 4,-2.0 1,-0.2 -1,-0.2 0.914 113.9 44.8 -56.4 -44.5 94.1 -55.7 83.5 42 54 A I H X S+ 0 0 0 -4,-2.5 4,-1.3 -3,-0.2 6,-0.3 0.856 109.6 53.5 -68.1 -42.1 90.8 -53.8 83.4 43 55 A A H ><>S+ 0 0 6 -4,-2.7 5,-2.7 -5,-0.2 3,-1.2 0.992 116.1 37.8 -59.1 -61.3 89.1 -55.9 80.6 44 56 A A H ><5S+ 0 0 82 -4,-1.8 3,-1.8 1,-0.3 -1,-0.2 0.893 112.3 60.4 -57.7 -39.6 89.7 -59.2 82.3 45 57 A G H 3<5S+ 0 0 53 -4,-2.0 -1,-0.3 -5,-0.4 -2,-0.2 0.757 114.9 33.8 -60.5 -26.0 89.0 -57.7 85.7 46 58 A S T <<5S- 0 0 19 -4,-1.3 -1,-0.3 -3,-1.2 -2,-0.2 -0.071 115.3-108.9-119.5 29.8 85.5 -56.7 84.6 47 59 A G T < 5S+ 0 0 60 -3,-1.8 -3,-0.2 1,-0.2 -4,-0.1 0.681 82.1 118.5 51.0 24.4 84.8 -59.7 82.3 48 60 A X < - 0 0 59 -5,-2.7 2,-0.3 -6,-0.3 -1,-0.2 -0.282 64.6-108.6-104.6-169.0 85.1 -57.4 79.2 49 61 A Q >> - 0 0 115 -2,-0.1 4,-1.8 -3,-0.1 3,-0.6 -0.892 30.0-112.7-121.5 151.9 87.4 -57.2 76.1 50 62 A V H 3> S+ 0 0 48 -2,-0.3 4,-2.9 1,-0.3 5,-0.3 0.891 118.7 58.9 -54.2 -39.6 90.0 -54.5 75.5 51 63 A Q H 3> S+ 0 0 147 1,-0.2 4,-2.4 2,-0.2 -1,-0.3 0.922 103.7 52.4 -55.2 -43.2 87.9 -53.3 72.6 52 64 A D H <> S+ 0 0 70 -3,-0.6 4,-2.2 2,-0.2 -1,-0.2 0.955 110.4 47.5 -55.1 -53.1 85.1 -52.7 75.1 53 65 A V H X S+ 0 0 0 -4,-1.8 4,-3.4 1,-0.2 5,-0.3 0.939 110.1 50.5 -53.6 -55.2 87.4 -50.7 77.4 54 66 A N H X S+ 0 0 61 -4,-2.9 4,-3.5 1,-0.2 -1,-0.2 0.896 108.2 56.0 -50.3 -41.2 88.7 -48.5 74.5 55 67 A R H X S+ 0 0 47 -4,-2.4 4,-2.4 -5,-0.3 -1,-0.2 0.946 110.4 42.4 -56.1 -51.2 85.1 -48.0 73.6 56 68 A L H X S+ 0 0 3 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.881 116.4 49.0 -62.7 -39.2 84.4 -46.7 77.1 57 69 A L H X S+ 0 0 28 -4,-3.4 4,-1.7 1,-0.2 -2,-0.2 0.843 108.6 54.8 -67.2 -35.3 87.7 -44.7 76.9 58 70 A K H X S+ 0 0 127 -4,-3.5 4,-1.9 -5,-0.3 -2,-0.2 0.912 108.6 48.3 -63.4 -45.8 86.5 -43.5 73.5 59 71 A Q H X S+ 0 0 90 -4,-2.4 4,-3.0 1,-0.2 5,-0.2 0.966 109.0 50.3 -61.3 -56.1 83.3 -42.2 75.0 60 72 A F H X S+ 0 0 17 -4,-2.2 4,-3.5 1,-0.2 5,-0.3 0.873 108.0 55.9 -50.4 -41.5 84.9 -40.3 78.0 61 73 A D H X S+ 0 0 69 -4,-1.7 4,-3.6 2,-0.2 -1,-0.2 0.951 111.2 41.7 -58.2 -51.3 87.3 -38.7 75.5 62 74 A D H X S+ 0 0 56 -4,-1.9 4,-2.3 1,-0.2 -2,-0.2 0.901 116.5 50.4 -62.2 -41.1 84.4 -37.2 73.4 63 75 A X H < S+ 0 0 50 -4,-3.0 -2,-0.2 2,-0.2 -1,-0.2 0.890 114.8 43.0 -62.6 -41.8 82.6 -36.4 76.6 64 76 A Q H >X S+ 0 0 25 -4,-3.5 3,-2.6 -5,-0.2 4,-0.9 0.932 111.9 53.6 -69.9 -47.0 85.7 -34.6 78.0 65 77 A R H >< S+ 0 0 157 -4,-3.6 3,-0.9 1,-0.3 -2,-0.2 0.875 106.1 53.4 -54.9 -38.9 86.4 -33.0 74.7 66 78 A X T 3< S+ 0 0 121 -4,-2.3 -1,-0.3 1,-0.2 3,-0.2 0.334 104.9 58.2 -79.0 9.0 82.8 -31.6 74.8 67 79 A X T X4 S+ 0 0 76 -3,-2.6 3,-0.5 1,-0.1 -1,-0.2 0.547 94.5 61.6-108.6 -19.0 83.7 -30.3 78.2 68 80 A K T << S+ 0 0 89 -4,-0.9 -1,-0.1 -3,-0.9 -2,-0.1 -0.199 95.4 68.2 -98.6 38.3 86.6 -28.2 76.9 69 81 A K T 3 0 0 166 -3,-0.2 -1,-0.2 0, 0.0 -3,-0.1 -0.058 360.0 360.0-146.2 32.2 84.1 -26.3 74.8 70 82 A X < 0 0 210 -3,-0.5 -2,-0.1 0, 0.0 -3,-0.1 -0.046 360.0 360.0-178.7 360.0 82.0 -24.4 77.5