==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN FIBRIL 14-DEC-10 3PZZ . COMPND 2 MOLECULE: GAIIGL HEXAPEPTIDE SEGMENT FROM AMYLOID BETA; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.B.SORIAGA,A.L.LAGANOWSKY,M.R.SAWAYA,D.EISENBERG . 12 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1198.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 33.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 76 0, 0.0 12,-2.5 0, 0.0 11,-0.8 0.000 360.0 360.0 360.0 164.4 -2.5 3.7 11.3 2 2 A A E -A 11 0A 57 9,-0.2 2,-0.4 10,-0.2 9,-0.2 -0.991 360.0-151.1-154.1 153.6 -1.4 2.3 8.0 3 3 A I E -A 10 0A 99 7,-2.3 7,-3.0 -2,-0.3 2,-0.5 -0.995 19.1-175.3-128.2 123.4 -1.9 2.8 4.2 4 4 A I E +A 9 0A 134 -2,-0.4 2,-0.3 5,-0.2 5,-0.2 -0.982 44.9 42.2-125.3 126.9 -1.5 -0.3 2.1 5 5 A G 0 0 40 3,-2.7 -2,-0.1 -2,-0.5 0, 0.0 -0.896 360.0 360.0 137.0-167.8 -1.6 -0.2 -1.7 6 6 A L 0 0 238 -2,-0.3 -2,-0.1 3,-0.0 0, 0.0 -0.596 360.0 360.0 -95.8 360.0 -0.3 2.1 -4.5 7 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 8 1 B G 0 0 71 0, 0.0 -3,-2.7 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0-172.6 3.5 -0.5 -1.0 9 2 B A E -A 4 0A 63 -5,-0.2 2,-0.5 2,-0.0 -5,-0.2 -0.997 360.0-162.8-142.3 133.8 2.9 -0.1 2.7 10 3 B I E -A 3 0A 90 -7,-3.0 -7,-2.3 -2,-0.4 2,-0.3 -0.990 26.5-171.9-112.9 120.0 3.1 2.8 5.0 11 4 B I E +A 2 0A 123 -2,-0.5 -9,-0.2 -9,-0.2 -2,-0.0 -0.859 51.8 23.8-118.9 144.8 3.1 1.5 8.6 12 5 B G 0 0 65 -11,-0.8 -10,-0.2 -2,-0.3 -1,-0.2 0.810 360.0 360.0 78.1 31.9 2.9 3.2 12.0 13 6 B L 0 0 142 -12,-2.5 -1,-0.2 -3,-0.2 -3,-0.0 -0.460 360.0 360.0 -69.8 360.0 1.2 6.4 11.0