==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 22-JUL-03 1Q1V . COMPND 2 MOLECULE: DEK PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.DEVANY,N.P.KOTHARU,H.MATSUO . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6020.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 70.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 15.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 45.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 309 A D 0 0 193 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 137.4 18.2 25.9 5.5 2 310 A E + 0 0 171 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.037 360.0 50.4-177.6 -59.3 21.3 23.7 5.5 3 311 A P S S+ 0 0 114 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.778 87.2 96.3 -72.2 -27.1 20.7 20.0 6.5 4 312 A L + 0 0 131 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.495 41.7 124.2 -67.3 115.7 17.8 19.7 3.9 5 313 A I - 0 0 112 -2,-0.5 -1,-0.2 0, 0.0 0, 0.0 0.511 38.7-166.2-137.9 -55.6 19.4 18.2 0.8 6 314 A K + 0 0 177 1,-0.1 3,-0.1 0, 0.0 -2,-0.0 0.862 16.2 165.9 59.5 104.6 17.6 15.0 -0.4 7 315 A K + 0 0 148 1,-0.1 2,-0.5 0, 0.0 -1,-0.1 0.583 50.7 81.3-122.8 -22.8 19.8 13.2 -3.0 8 316 A L + 0 0 148 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.749 44.3 138.3 -90.3 125.5 18.2 9.7 -3.2 9 317 A K + 0 0 157 -2,-0.5 -1,-0.1 2,-0.1 40,-0.0 -0.319 22.5 130.1-164.0 71.1 15.1 9.5 -5.4 10 318 A K - 0 0 130 39,-0.0 3,-0.0 3,-0.0 -2,-0.0 -0.904 57.6 -96.7-128.9 158.9 14.8 6.4 -7.6 11 319 A P - 0 0 86 0, 0.0 2,-0.4 0, 0.0 -2,-0.1 -0.458 42.9-108.8 -73.3 143.2 12.1 3.9 -8.4 12 320 A P - 0 0 3 0, 0.0 5,-0.2 0, 0.0 34,-0.0 -0.556 37.2-114.5 -73.9 126.3 12.2 0.6 -6.5 13 321 A T >> - 0 0 79 -2,-0.4 4,-2.1 1,-0.1 3,-1.5 -0.073 36.2 -95.3 -54.3 162.1 13.2 -2.3 -8.7 14 322 A D H 3> S+ 0 0 97 1,-0.3 4,-2.4 2,-0.2 5,-0.5 0.882 126.5 65.0 -50.1 -36.9 10.6 -5.0 -9.3 15 323 A E H 3> S+ 0 0 150 1,-0.2 4,-1.2 2,-0.2 -1,-0.3 0.904 109.5 38.2 -55.2 -38.5 12.2 -7.0 -6.5 16 324 A E H <> S+ 0 0 109 -3,-1.5 4,-2.5 2,-0.2 -2,-0.2 0.965 116.3 49.2 -78.0 -54.7 11.2 -4.2 -4.1 17 325 A L H X S+ 0 0 0 -4,-2.1 4,-1.9 -5,-0.2 5,-0.2 0.965 113.6 46.6 -48.9 -59.9 7.7 -3.4 -5.6 18 326 A K H X S+ 0 0 107 -4,-2.4 4,-3.4 1,-0.2 5,-0.3 0.935 108.6 57.3 -50.1 -47.3 6.7 -7.1 -5.6 19 327 A E H X S+ 0 0 100 -4,-1.2 4,-1.4 -5,-0.5 -1,-0.2 0.949 104.0 52.3 -50.6 -50.9 8.0 -7.5 -2.1 20 328 A T H >X S+ 0 0 13 -4,-2.5 4,-1.1 1,-0.2 3,-0.6 0.954 115.2 40.9 -52.0 -51.9 5.6 -4.7 -0.9 21 329 A I H >X>S+ 0 0 1 -4,-1.9 3,-1.7 1,-0.2 4,-1.4 0.974 105.3 62.8 -62.9 -52.6 2.6 -6.4 -2.5 22 330 A K H 3X5S+ 0 0 82 -4,-3.4 4,-1.0 1,-0.3 -1,-0.2 0.820 105.4 51.1 -43.1 -28.0 3.7 -9.9 -1.4 23 331 A K H <<5S+ 0 0 123 -4,-1.4 4,-0.3 -3,-0.6 -1,-0.3 0.838 106.9 53.2 -80.9 -31.8 3.2 -8.4 2.1 24 332 A L H X<5S+ 0 0 28 -3,-1.7 3,-2.3 -4,-1.1 -2,-0.2 0.997 113.5 38.7 -66.4 -63.3 -0.3 -7.1 1.3 25 333 A L H ><5S+ 0 0 36 -4,-1.4 3,-2.3 1,-0.3 -1,-0.2 0.891 108.1 65.7 -55.6 -37.4 -1.8 -10.4 0.0 26 334 A A T 3< - 0 0 112 -2,-0.3 3,-1.2 1,-0.2 4,-0.5 -0.542 32.2-142.0 -72.1 125.6 -7.5 -13.4 1.5 30 338 A L G > S+ 0 0 33 -2,-0.4 3,-1.5 40,-0.3 -1,-0.2 0.942 104.0 47.8 -53.6 -49.1 -6.5 -13.4 -2.2 31 339 A E G 3 S+ 0 0 155 39,-0.5 -1,-0.3 1,-0.3 -2,-0.1 0.669 113.4 50.7 -68.6 -11.6 -10.1 -14.1 -3.3 32 340 A E G < S+ 0 0 142 -3,-1.2 2,-0.3 2,-0.0 -1,-0.3 0.372 96.3 85.8-105.7 5.0 -11.1 -11.3 -0.9 33 341 A V < - 0 0 10 -3,-1.5 2,-0.3 -4,-0.5 -5,-0.0 -0.797 60.4-159.7-105.9 148.6 -8.6 -8.7 -2.2 34 342 A T >> - 0 0 73 -2,-0.3 4,-1.7 1,-0.1 3,-0.7 -0.867 34.6-108.1-124.4 159.9 -9.2 -6.4 -5.2 35 343 A M H 3> S+ 0 0 106 -2,-0.3 4,-1.9 1,-0.2 5,-0.2 0.826 118.3 62.5 -55.3 -28.1 -6.9 -4.4 -7.5 36 344 A K H 3> S+ 0 0 150 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.931 102.4 47.5 -65.7 -43.1 -8.2 -1.3 -5.7 37 345 A Q H <> S+ 0 0 80 -3,-0.7 4,-2.4 1,-0.2 5,-0.4 0.894 108.8 55.6 -66.6 -36.8 -6.8 -2.4 -2.3 38 346 A I H X S+ 0 0 2 -4,-1.7 4,-2.6 1,-0.2 5,-0.3 0.952 107.9 47.3 -62.0 -47.3 -3.4 -3.3 -3.8 39 347 A C H X S+ 0 0 24 -4,-1.9 4,-2.1 2,-0.2 5,-0.2 0.920 112.6 50.8 -61.9 -41.0 -2.9 0.2 -5.3 40 348 A K H X S+ 0 0 131 -4,-1.8 4,-1.7 -5,-0.2 -2,-0.2 0.991 118.4 34.9 -61.6 -59.8 -3.9 1.9 -2.0 41 349 A K H X S+ 0 0 75 -4,-2.4 4,-1.4 2,-0.2 3,-0.3 0.976 115.1 56.9 -60.3 -54.1 -1.5 -0.1 0.2 42 350 A V H >X S+ 0 0 0 -4,-2.6 3,-1.4 -5,-0.4 4,-1.4 0.936 106.4 49.5 -42.6 -58.3 1.2 -0.3 -2.4 43 351 A Y H >< S+ 0 0 77 -4,-2.1 3,-0.9 -5,-0.3 -1,-0.3 0.918 99.4 67.8 -50.3 -42.6 1.3 3.5 -2.7 44 352 A E H 3< S+ 0 0 148 -4,-1.7 -1,-0.3 -3,-0.3 -2,-0.2 0.900 110.2 34.9 -45.5 -42.1 1.5 3.6 1.2 45 353 A N H << S+ 0 0 93 -3,-1.4 -1,-0.3 -4,-1.4 -2,-0.2 0.633 125.1 45.2 -88.5 -12.9 5.0 2.0 0.8 46 354 A Y << + 0 0 10 -4,-1.4 3,-0.5 -3,-0.9 5,-0.3 -0.386 69.6 129.5-126.8 57.2 5.7 4.0 -2.4 47 355 A P S S+ 0 0 87 0, 0.0 2,-2.2 0, 0.0 -1,-0.1 0.955 71.0 52.2 -75.0 -54.5 4.5 7.5 -1.6 48 356 A T S S+ 0 0 108 -3,-0.1 2,-0.3 -5,-0.1 -5,-0.0 -0.226 101.9 83.7 -78.8 53.9 7.6 9.4 -2.7 49 357 A Y S S- 0 0 80 -2,-2.2 2,-0.6 -3,-0.5 -3,-0.1 -0.999 75.3-132.2-152.8 151.7 7.5 7.7 -6.1 50 358 A D - 0 0 151 -2,-0.3 2,-1.0 5,-0.0 3,-0.3 -0.355 32.5-179.0-100.7 54.5 5.8 8.2 -9.5 51 359 A L + 0 0 18 -2,-0.6 -2,-0.1 -5,-0.3 -8,-0.0 -0.332 27.4 135.2 -57.2 97.5 4.7 4.5 -9.9 52 360 A T S > S+ 0 0 88 -2,-1.0 4,-1.6 3,-0.1 -1,-0.2 0.763 77.2 17.9-110.8 -61.3 3.0 4.7 -13.3 53 361 A E H > S+ 0 0 127 -3,-0.3 4,-1.4 2,-0.2 -2,-0.1 0.956 130.0 48.0 -78.2 -51.2 4.2 1.8 -15.4 54 362 A R H > S+ 0 0 136 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.817 108.7 60.9 -59.4 -23.9 5.5 -0.3 -12.5 55 363 A K H > S+ 0 0 59 2,-0.2 4,-1.6 1,-0.2 5,-0.4 0.986 96.5 54.0 -67.7 -55.6 2.2 0.5 -10.9 56 364 A D H X S+ 0 0 87 -4,-1.6 4,-1.6 1,-0.2 -1,-0.2 0.864 110.0 53.2 -47.0 -31.5 0.1 -1.2 -13.6 57 365 A F H X S+ 0 0 71 -4,-1.4 4,-2.7 2,-0.2 -1,-0.2 0.979 103.8 53.0 -69.5 -54.6 2.3 -4.2 -12.8 58 366 A I H >X S+ 0 0 0 -4,-2.3 4,-1.5 1,-0.2 3,-1.3 0.954 111.6 44.7 -43.9 -67.9 1.6 -4.1 -9.0 59 367 A K H 3X S+ 0 0 48 -4,-1.6 4,-2.4 1,-0.3 3,-0.3 0.902 115.2 49.9 -45.3 -44.0 -2.2 -4.2 -9.4 60 368 A T H 3X S+ 0 0 33 -4,-1.6 4,-1.9 -5,-0.4 -1,-0.3 0.823 101.0 64.3 -68.0 -27.9 -1.6 -6.9 -12.1 61 369 A T H