==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 18-AUG-03 1Q7D . COMPND 2 MOLECULE: COLLAGEN ALFA 1(I) CHAIN PEPTIDE . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.EMSLEY,C.G.KNIGHT,R.W.FARNDALE,M.J.BARNES . 62 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4322.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 29.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A G 0 0 94 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 160.4 2.7 1.3 1.5 2 3 A P - 0 0 101 0, 0.0 24,-0.1 0, 0.0 0, 0.0 -0.460 360.0 -99.7 -75.0 143.5 4.3 4.1 3.5 3 4 A X - 0 0 100 20,-0.1 22,-0.2 -2,-0.1 23,-0.2 -0.200 44.9-105.6 -58.0 150.9 3.2 7.8 2.9 4 5 A G - 0 0 10 20,-2.3 43,-0.2 42,-0.5 -1,-0.1 -0.058 41.3 -81.8 -73.1 178.5 5.6 9.8 0.7 5 6 A P - 0 0 65 0, 0.0 43,-2.1 0, 0.0 21,-0.4 -0.263 61.2 -73.2 -76.2 168.6 8.0 12.6 1.9 6 7 A X - 0 0 99 41,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.188 55.4-104.7 -60.0 152.6 6.9 16.2 2.6 7 8 A G - 0 0 10 20,-1.9 23,-0.4 42,-0.3 43,-0.2 -0.111 43.8 -79.0 -72.7 175.2 6.1 18.5 -0.3 8 9 A F - 0 0 154 40,-0.4 43,-2.4 21,-0.2 21,-0.3 -0.380 60.2 -87.3 -71.9 150.8 8.3 21.3 -1.7 9 10 A X - 0 0 84 41,-0.2 22,-0.2 20,-0.1 23,-0.1 -0.203 47.3-103.8 -59.2 152.1 8.3 24.7 0.2 10 11 A G - 0 0 11 20,-3.1 23,-0.3 42,-0.2 42,-0.2 -0.246 41.9 -97.9 -70.1 164.1 5.7 27.2 -0.7 11 12 A E - 0 0 140 40,-0.4 43,-1.9 21,-0.2 21,-0.5 -0.424 48.7 -81.5 -82.5 162.4 6.6 30.2 -2.8 12 13 A R - 0 0 136 41,-0.2 22,-0.2 20,-0.2 -1,-0.1 -0.239 54.7-100.9 -59.9 149.1 7.4 33.6 -1.4 13 14 A G - 0 0 5 20,-2.7 42,-0.2 42,-0.2 43,-0.1 -0.157 44.5 -86.8 -67.9 165.1 4.5 35.8 -0.5 14 15 A P - 0 0 56 0, 0.0 43,-2.4 0, 0.0 21,-0.3 -0.253 52.1 -87.2 -70.8 160.3 3.2 38.7 -2.7 15 16 A X - 0 0 99 41,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.298 51.2-102.9 -63.7 152.4 4.7 42.3 -2.5 16 17 A G - 0 0 6 20,-2.5 43,-0.2 42,-0.3 -1,-0.1 -0.170 41.2 -91.4 -72.4 169.5 3.0 44.6 0.1 17 18 A P - 0 0 51 0, 0.0 43,-2.3 0, 0.0 21,-0.3 -0.286 56.0 -72.7 -77.5 167.5 0.5 47.3 -0.8 18 19 A X - 0 0 103 41,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.211 55.0-112.2 -56.6 148.2 1.5 51.0 -1.6 19 20 A G - 0 0 7 20,-2.1 43,-0.2 42,-0.3 -1,-0.1 -0.178 43.1 -78.4 -75.1 175.7 2.5 53.0 1.4 20 21 A P 0 0 58 0, 0.0 43,-2.7 0, 0.0 21,-0.4 -0.335 360.0 360.0 -74.3 159.4 0.5 55.9 2.8 21 22 A X 0 0 126 41,-0.2 22,-0.2 20,-0.1 41,-0.1 -0.181 360.0 360.0 -50.3 360.0 0.5 59.4 1.1 22 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 23 2 B G 0 0 63 0, 0.0 -20,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 179.6 1.7 4.5 -1.0 24 3 B P - 0 0 59 0, 0.0 -20,-2.3 0, 0.0 24,-0.0 -0.300 360.0 -93.0 -69.7 154.4 -0.2 7.6 -0.0 25 4 B X - 0 0 96 -22,-0.2 22,-0.2 20,-0.1 23,-0.2 -0.326 45.7-108.6 -66.2 153.3 1.1 11.1 -0.9 26 5 B G - 0 0 7 20,-1.9 -20,-0.2 -21,-0.4 -1,-0.1 -0.106 45.1 -76.4 -73.9 177.4 3.3 12.8 1.7 27 6 B P - 0 0 64 0, 0.0 -20,-1.9 0, 0.0 21,-0.4 -0.273 59.2 -85.0 -72.5 163.8 2.1 15.9 3.7 28 7 B X - 0 0 80 -22,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.313 49.5-106.2 -66.1 153.0 2.0 19.4 2.2 29 8 B G - 0 0 7 20,-2.1 23,-0.4 -21,-0.3 -21,-0.2 -0.141 43.4 -82.6 -72.5 174.0 5.2 21.4 2.2 30 9 B F - 0 0 155 -23,-0.4 -20,-3.1 21,-0.2 21,-0.3 -0.347 52.2 -91.1 -76.5 159.0 5.9 24.4 4.5 31 10 B X - 0 0 91 -22,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.278 44.7-110.1 -65.8 154.0 4.6 27.9 3.7 32 11 B G - 0 0 11 20,-2.0 23,-0.4 -21,-0.5 -21,-0.2 -0.116 40.2 -88.1 -74.8-178.5 6.9 30.2 1.8 33 12 B E - 0 0 128 -23,-0.3 -20,-2.7 21,-0.2 21,-0.3 -0.333 55.6 -74.0 -86.5 173.1 8.6 33.3 3.3 34 13 B R - 0 0 131 20,-0.2 22,-0.2 -22,-0.2 -1,-0.1 -0.345 49.6-110.9 -71.4 146.9 7.1 36.8 3.5 35 14 B G - 0 0 5 20,-2.8 -20,-0.2 -21,-0.3 -1,-0.1 -0.208 39.4 -88.1 -71.6 165.5 6.8 39.0 0.5 36 15 B P - 0 0 56 0, 0.0 -20,-2.5 0, 0.0 21,-0.2 -0.245 53.9 -82.1 -70.6 158.7 8.9 42.3 -0.1 37 16 B X - 0 0 100 -22,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.236 52.0-107.3 -59.6 151.7 7.7 45.7 1.2 38 17 B G - 0 0 6 20,-2.2 -20,-0.2 -21,-0.3 -1,-0.1 -0.146 44.9 -79.2 -73.3 173.8 5.2 47.5 -1.0 39 18 B P - 0 0 62 0, 0.0 -20,-2.1 0, 0.0 21,-0.3 -0.302 58.9 -82.3 -72.8 159.7 6.2 50.6 -3.2 40 19 B X - 0 0 103 -22,-0.2 22,-0.2 20,-0.2 23,-0.2 -0.213 55.2-103.9 -56.7 153.2 6.5 54.1 -1.6 41 20 B G - 0 0 7 20,-2.1 -20,-0.1 -21,-0.4 2,-0.1 -0.194 42.4 -82.9 -75.0 170.7 3.2 55.9 -1.2 42 21 B P 0 0 64 0, 0.0 21,-0.4 0, 0.0 -1,-0.1 -0.440 360.0 360.0 -73.4 149.7 1.9 58.7 -3.5 43 22 B X 0 0 143 -22,-0.2 -22,-0.1 21,-0.2 20,-0.0 -0.133 360.0 360.0 -47.6 360.0 3.2 62.2 -2.8 44 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 45 2 C G 0 0 41 0, 0.0 -20,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-177.8 4.2 7.0 -2.0 46 3 C P - 0 0 61 0, 0.0 -20,-1.9 0, 0.0 -42,-0.5 -0.261 360.0 -86.8 -71.0 159.8 4.7 10.2 -4.0 47 4 C X - 0 0 102 -22,-0.2 -41,-0.2 -43,-0.2 -40,-0.2 -0.215 51.0-102.3 -61.0 155.7 5.9 13.5 -2.4 48 5 C G - 0 0 8 -43,-2.1 -40,-0.4 -21,-0.4 -20,-0.2 -0.151 46.1 -83.0 -73.2 175.1 3.3 15.7 -0.9 49 6 C P - 0 0 64 0, 0.0 -20,-2.1 0, 0.0 -42,-0.3 -0.326 57.5 -83.0 -75.5 162.6 2.0 18.9 -2.8 50 7 C X - 0 0 98 -22,-0.2 -41,-0.2 -43,-0.2 -40,-0.2 -0.210 51.7-100.5 -62.5 158.3 3.9 22.2 -2.5 51 8 C G - 0 0 10 -43,-2.4 -40,-0.4 -21,-0.3 -21,-0.2 -0.117 42.6 -88.4 -72.4 175.3 3.4 24.4 0.5 52 9 C F - 0 0 134 -23,-0.4 -20,-2.0 -42,-0.2 -42,-0.2 -0.391 53.8 -83.3 -82.3 161.7 1.1 27.5 0.5 53 10 C X - 0 0 88 -22,-0.2 -41,-0.2 -43,-0.2 -40,-0.2 -0.200 51.1-104.1 -61.8 157.4 2.4 31.0 -0.4 54 11 C G - 0 0 12 -43,-1.9 -21,-0.2 -21,-0.3 -20,-0.2 -0.110 50.6 -64.7 -75.8 178.1 4.2 33.1 2.2 55 12 C E - 0 0 128 -23,-0.4 -20,-2.8 -42,-0.2 -42,-0.2 -0.205 59.7 -96.5 -62.2 153.1 2.9 36.1 4.2 56 13 C R - 0 0 165 -22,-0.2 -41,-0.2 -43,-0.1 -40,-0.1 -0.456 49.4-103.0 -69.2 142.7 1.9 39.3 2.3 57 14 C G - 0 0 4 -43,-2.4 -20,-0.2 -21,-0.2 -1,-0.1 -0.145 41.6 -89.3 -64.9 163.1 4.7 41.9 2.4 58 15 C P - 0 0 35 0, 0.0 -20,-2.2 0, 0.0 -42,-0.3 -0.311 53.0 -90.6 -69.2 155.5 4.7 44.9 4.7 59 16 C X - 0 0 101 -22,-0.2 -41,-0.2 -43,-0.2 -40,-0.2 -0.280 52.5 -99.0 -62.1 157.6 3.0 48.1 3.3 60 17 C G - 0 0 5 -43,-2.3 -20,-0.2 -21,-0.3 -1,-0.1 -0.186 45.2 -85.2 -72.5 170.3 5.4 50.4 1.6 61 18 C P - 0 0 62 0, 0.0 -20,-2.1 0, 0.0 -42,-0.3 -0.327 60.2 -77.3 -72.8 159.5 7.0 53.5 3.2 62 19 C X - 0 0 107 -22,-0.2 -41,-0.2 -43,-0.2 -19,-0.1 -0.116 54.1-107.1 -53.0 153.2 5.1 56.9 3.3 63 20 C G 0 0 12 -43,-2.7 -20,-0.1 -21,-0.4 -1,-0.1 -0.378 360.0 360.0 -81.0 164.5 5.1 58.8 0.0 64 21 C P 0 0 132 0, 0.0 -21,-0.2 0, 0.0 -1,-0.1 0.846 360.0 360.0 -45.3 360.0 7.1 62.1 -0.5